Conservation of cofitness between BPHYT_RS29555 and BPHYT_RS06480 in Burkholderia phytofirmans PsJN

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS29555 MexH family multidrug efflux RND transporter periplasmic adaptor subunit 1.0 BPHYT_RS06480 ABC transporter permease 0.30 10
Paraburkholderia sabiae LMG 24235 0.83 QEN71_RS42080 efflux RND transporter periplasmic adaptor subunit 0.76 QEN71_RS24320 ABC transporter permease low > 153
Variovorax sp. SCN45 0.53 GFF265 RND efflux system, membrane fusion protein 0.39 GFF5663 ABC transporter, fused permease protein low > 127
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_18445 RND transporter 0.27 AO356_03235 ABC transporter permease low > 104
Pseudomonas sp. RS175 0.33 PFR28_03329 Multidrug export protein AcrE 0.28 PFR28_00956 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_5615 Probable Co/Zn/Cd efflux system membrane fusion protein 0.27 Pf6N2E2_2478 FIG00809136: hypothetical protein low > 103
Pseudomonas sp. S08-1 0.33 OH686_17365 Multidrug efflux system, membrane fusion component 0.26 OH686_01800 ABC transporter, fused permease protein low > 80
Pseudomonas fluorescens SBW25 0.32 PFLU_RS24400 efflux RND transporter periplasmic adaptor subunit 0.27 PFLU_RS08345 ABC transporter permease low > 109
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS24400 efflux RND transporter periplasmic adaptor subunit 0.27 PFLU_RS08345 ABC transporter permease low > 109
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_03995 RND transporter 0.28 AO353_18995 ABC transporter permease low > 101
Rhodospirillum rubrum S1H 0.32 Rru_A3700 Secretion protein HlyD (NCBI) 0.13 Rru_A3653 Protein of unknown function DUF214 (NCBI) low > 58
Pseudomonas putida KT2440 0.31 PP_0907 RND efflux membrane fusion protein-related protein 0.27 PP_2316 putative ABC transporter, permease protein low > 96
Azospirillum brasilense Sp245 0.31 AZOBR_RS31315 RND transporter 0.15 AZOBR_RS02255 glycosyl transferase family 1 low > 97
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_1772 Probable Co/Zn/Cd efflux system membrane fusion protein 0.28 PfGW456L13_2217 FIG00809136: hypothetical protein low > 87
Pseudomonas simiae WCS417 0.31 PS417_22750 RND transporter 0.29 PS417_08395 ABC transporter permease low > 88
Pseudomonas fluorescens FW300-N1B4 0.31 Pf1N1B4_719 Probable Co/Zn/Cd efflux system membrane fusion protein 0.29 Pf1N1B4_297 FIG00809136: hypothetical protein low > 87
Azospirillum sp. SherDot2 0.31 MPMX19_05611 Multidrug resistance protein MdtA 0.14 MPMX19_02590 hypothetical protein low > 112
Pseudomonas stutzeri RCH2 0.30 Psest_1154 RND family efflux transporter, MFP subunit 0.27 Psest_2338 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component low > 67
Marinobacter adhaerens HP15 0.29 HP15_3261 efflux transporter, RND family, MFP subunit 0.22 HP15_1386 ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component low > 73
Rhodopseudomonas palustris CGA009 0.27 TX73_019550 efflux RND transporter periplasmic adaptor subunit 0.13 TX73_001020 ABC transporter permease low > 86
Vibrio cholerae E7946 ATCC 55056 0.25 CSW01_00855 MexH family multidrug efflux RND transporter periplasmic adaptor subunit 0.16 CSW01_18080 ABC transporter permease low > 62
Shewanella sp. ANA-3 0.24 Shewana3_0372 RND family efflux transporter MFP subunit (RefSeq) 0.19 Shewana3_1539 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.24 SO4327 HlyD family secretion domain protein (NCBI ptt file) 0.18 SO2926 ABC transporter, permease, putative (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.23 Sama_3268 HlyD family secretion protein (RefSeq) 0.20 Sama_1487 ABC transporter, permease, putative (RefSeq) low > 62
Dechlorosoma suillum PS 0.22 Dsui_1556 RND family efflux transporter, MFP subunit 0.42 Dsui_2415 putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component 0.66 25
Xanthomonas campestris pv. campestris strain 8004 0.21 Xcc-8004.1261.1 Membrane fusion protein of RND family multidrug efflux pump 0.23 Xcc-8004.4289.1 ABC transporter, permease protein, putative low > 74
Alteromonas macleodii MIT1002 0.19 MIT1002_00728 Multidrug transporter MdtA 0.26 MIT1002_01416 outer membrane-specific lipoprotein transporter subunit LolE low > 70
Bosea sp. OAE506 0.19 ABIE41_RS07730 efflux RND transporter periplasmic adaptor subunit 0.13 ABIE41_RS04805 FtsX-like permease family protein low > 77
Caulobacter crescentus NA1000 0.19 CCNA_01261 periplasmic multidrug efflux lipoprotein precursor 0.06 CCNA_01834 oxidoreductase low > 66
Caulobacter crescentus NA1000 Δfur 0.19 CCNA_01261 periplasmic multidrug efflux lipoprotein precursor 0.06 CCNA_01834 oxidoreductase low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.19 A4249_RS07785 efflux RND transporter periplasmic adaptor subunit 0.10 A4249_RS05700 ABC transporter permease low > 48
Lysobacter sp. OAE881 0.18 ABIE51_RS16990 efflux RND transporter periplasmic adaptor subunit 0.29 ABIE51_RS18495 FtsX-like permease family protein low > 62
Pedobacter sp. GW460-11-11-14-LB5 0.18 CA265_RS17645 efflux transporter periplasmic adaptor subunit 0.16 CA265_RS01135 ABC transporter permease low > 88
Hydrogenophaga sp. GW460-11-11-14-LB1 0.18 GFF4260 Probable Co/Zn/Cd efflux system membrane fusion protein 0.38 GFF1178 ABC transporter, permease protein, putative low > 90
Echinicola vietnamensis KMM 6221, DSM 17526 0.17 Echvi_0680 RND family efflux transporter, MFP subunit 0.17 Echvi_1583 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component low > 79
Pontibacter actiniarum KMM 6156, DSM 19842 0.16 CA264_13035 MexH family multidrug efflux RND transporter periplasmic adaptor subunit 0.18 CA264_05670 ABC transporter permease low > 74
Sphingomonas koreensis DSMZ 15582 0.13 Ga0059261_3803 RND family efflux transporter, MFP subunit 0.08 Ga0059261_0561 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component low > 68

Not shown: 6 genomes with orthologs for BPHYT_RS29555 only; 50 genomes with orthologs for BPHYT_RS06480 only