Conservation of cofitness between BPHYT_RS29555 and BPHYT_RS03545 in Burkholderia phytofirmans PsJN

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS29555 MexH family multidrug efflux RND transporter periplasmic adaptor subunit 1.0 BPHYT_RS03545 apolipoprotein acyltransferase 0.29 19
Paraburkholderia sabiae LMG 24235 0.83 QEN71_RS42080 efflux RND transporter periplasmic adaptor subunit 0.87 QEN71_RS26550 carbon-nitrogen hydrolase family protein low > 153
Variovorax sp. SCN45 0.53 GFF265 RND efflux system, membrane fusion protein 0.51 GFF5445 FIG003879: Uncharacterized subgroup of the nitrilase superfamily low > 127
Magnetospirillum magneticum AMB-1 0.34 AMB_RS17265 MexH family multidrug efflux RND transporter periplasmic adaptor subunit 0.33 AMB_RS08115 carbon-nitrogen hydrolase family protein low > 64
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_18445 RND transporter 0.39 AO356_07100 carbon-nitrogen hydrolase low > 104
Pseudomonas sp. RS175 0.33 PFR28_03329 Multidrug export protein AcrE 0.39 PFR28_00160 Deaminated glutathione amidase 0.20 58
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_5615 Probable Co/Zn/Cd efflux system membrane fusion protein 0.39 Pf6N2E2_3281 FIG003879: Predicted amidohydrolase / Omega amidase (Nit2 homolog) low > 103
Pseudomonas sp. S08-1 0.33 OH686_17365 Multidrug efflux system, membrane fusion component 0.39 OH686_08585 Uncharacterized subgroup of the nitrilase superfamily low > 80
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS24400 efflux RND transporter periplasmic adaptor subunit 0.38 PFLU_RS04335 carbon-nitrogen hydrolase family protein low > 109
Pseudomonas fluorescens SBW25 0.32 PFLU_RS24400 efflux RND transporter periplasmic adaptor subunit 0.38 PFLU_RS04335 carbon-nitrogen hydrolase family protein low > 109
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_03995 RND transporter 0.38 AO353_05220 carbon-nitrogen hydrolase low > 101
Rhodospirillum rubrum S1H 0.32 Rru_A3700 Secretion protein HlyD (NCBI) 0.32 Rru_A0739 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (NCBI) low > 58
Pseudomonas putida KT2440 0.31 PP_0907 RND efflux membrane fusion protein-related protein 0.37 PP_0939 Carbon-nitrogen hydrolase family protein low > 96
Azospirillum brasilense Sp245 0.31 AZOBR_RS31315 RND transporter 0.35 AZOBR_RS02920 amidohydrolase low > 97
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_1772 Probable Co/Zn/Cd efflux system membrane fusion protein 0.39 PfGW456L13_5027 FIG003879: Predicted amidohydrolase / Omega amidase (Nit2 homolog) low > 87
Pseudomonas simiae WCS417 0.31 PS417_22750 RND transporter 0.38 PS417_04280 carbon-nitrogen hydrolase low > 88
Pseudomonas fluorescens FW300-N1B4 0.31 Pf1N1B4_719 Probable Co/Zn/Cd efflux system membrane fusion protein 0.38 Pf1N1B4_1093 FIG003879: Predicted amidohydrolase / Omega amidase (Nit2 homolog) low > 87
Azospirillum sp. SherDot2 0.31 MPMX19_05611 Multidrug resistance protein MdtA 0.33 MPMX19_02429 Deaminated glutathione amidase low > 112
Pseudomonas stutzeri RCH2 0.30 Psest_1154 RND family efflux transporter, MFP subunit 0.37 Psest_3321 Predicted amidohydrolase low > 67
Marinobacter adhaerens HP15 0.29 HP15_3261 efflux transporter, RND family, MFP subunit 0.40 HP15_2449 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase low > 73
Rhodopseudomonas palustris CGA009 0.27 TX73_019550 efflux RND transporter periplasmic adaptor subunit 0.32 TX73_003100 carbon-nitrogen hydrolase family protein low > 86
Vibrio cholerae E7946 ATCC 55056 0.25 CSW01_00855 MexH family multidrug efflux RND transporter periplasmic adaptor subunit 0.37 CSW01_02215 carbon-nitrogen hydrolase family protein low > 62
Shewanella sp. ANA-3 0.24 Shewana3_0372 RND family efflux transporter MFP subunit (RefSeq) 0.36 Shewana3_3642 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.24 SO4327 HlyD family secretion domain protein (NCBI ptt file) 0.36 SO4092 hydrolase, carbon-nitrogen family (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.23 Sama_3268 HlyD family secretion protein (RefSeq) 0.33 Sama_0473 carbon-nitrogen family hydrolase (RefSeq) low > 62
Dechlorosoma suillum PS 0.22 Dsui_1556 RND family efflux transporter, MFP subunit 0.54 Dsui_3402 putative amidohydrolase low > 51
Alteromonas macleodii MIT1002 0.19 MIT1002_00728 Multidrug transporter MdtA 0.39 MIT1002_00226 (R)-stereoselective amidase low > 70
Caulobacter crescentus NA1000 0.19 CCNA_01261 periplasmic multidrug efflux lipoprotein precursor 0.30 CCNA_00871 carbon-nitrogen hydrolase family protein low > 66
Caulobacter crescentus NA1000 Δfur 0.19 CCNA_01261 periplasmic multidrug efflux lipoprotein precursor 0.30 CCNA_00871 carbon-nitrogen hydrolase family protein low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.19 A4249_RS07785 efflux RND transporter periplasmic adaptor subunit 0.29 A4249_RS13565 carbon-nitrogen hydrolase family protein low > 48
Pedobacter sp. GW460-11-11-14-LB5 0.18 CA265_RS17645 efflux transporter periplasmic adaptor subunit 0.16 CA265_RS08135 amidohydrolase low > 88
Hydrogenophaga sp. GW460-11-11-14-LB1 0.18 GFF4260 Probable Co/Zn/Cd efflux system membrane fusion protein 0.51 GFF2535 FIG003879: Predicted amidohydrolase low > 90
Echinicola vietnamensis KMM 6221, DSM 17526 0.17 Echvi_0680 RND family efflux transporter, MFP subunit 0.15 Echvi_1887 Predicted amidohydrolase low > 79
Parabacteroides merdae CL09T00C40 0.17 HMPREF1078_RS05465 efflux RND transporter periplasmic adaptor subunit 0.15 HMPREF1078_RS14090 amidohydrolase low > 61
Pontibacter actiniarum KMM 6156, DSM 19842 0.16 CA264_13035 MexH family multidrug efflux RND transporter periplasmic adaptor subunit 0.13 CA264_15860 amidohydrolase low > 74
Bacteroides thetaiotaomicron VPI-5482 0.13 BT2251 putative membrane fusion protein precursor (NCBI ptt file) 0.14 BT0259 putative amidohydrolase (NCBI ptt file) low > 81
Sphingomonas koreensis DSMZ 15582 0.13 Ga0059261_3803 RND family efflux transporter, MFP subunit 0.33 Ga0059261_3603 Predicted amidohydrolase low > 68

Not shown: 6 genomes with orthologs for BPHYT_RS29555 only; 51 genomes with orthologs for BPHYT_RS03545 only