Conservation of cofitness between BPHYT_RS12840 and BPHYT_RS02590 in Burkholderia phytofirmans PsJN

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS12840 pyruvate dehydrogenase 1.0 BPHYT_RS02590 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 0.66 15
Paraburkholderia bryophila 376MFSha3.1 0.97 H281DRAFT_00466 pyruvate dehydrogenase E1 component 0.93 H281DRAFT_02004 phosphoglycerate mutase
Paraburkholderia graminis OAS925 0.97 ABIE53_002793 pyruvate dehydrogenase E1 component 0.93 ABIE53_000663 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
Paraburkholderia sabiae LMG 24235 0.92 QEN71_RS05725 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.91 QEN71_RS01445 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Ralstonia sp. UNC404CL21Col 0.82 ABZR87_RS13470 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.79 ABZR87_RS06750 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Cupriavidus basilensis FW507-4G11 0.82 RR42_RS07365 pyruvate dehydrogenase 0.80 RR42_RS01825 phosphoglyceromutase
Ralstonia solanacearum UW163 0.81 UW163_RS14980 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.79 UW163_RS02680 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Ralstonia solanacearum IBSBF1503 0.81 RALBFv3_RS01670 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.79 RALBFv3_RS10900 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Ralstonia solanacearum PSI07 0.81 RPSI07_RS15815 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.78 RPSI07_RS22410 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Ralstonia solanacearum GMI1000 0.81 RS_RS08055 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.79 RS_RS01740 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
Herbaspirillum seropedicae SmR1 0.66 HSERO_RS07305 pyruvate dehydrogenase 0.77 HSERO_RS00820 phosphoglyceromutase
Alteromonas macleodii MIT1002 0.63 MIT1002_03003 Pyruvate dehydrogenase E1 component 0.63 MIT1002_00378 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
Dyella japonica UNC79MFTsu3.2 0.63 ABZR86_RS12410 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.70 ABZR86_RS13515 2,3-diphosphoglycerate-dependent phosphoglycerate mutase low > 74
Castellaniella sp019104865 MT123 0.62 ABCV34_RS04160 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.69 ABCV34_RS14270 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Acidovorax sp. GW101-3H11 0.62 Ac3H11_4093 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.73 Ac3H11_3856 Phosphoglycerate mutase (EC 5.4.2.1)
Hydrogenophaga sp. GW460-11-11-14-LB1 0.62 GFF4890 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.73 GFF1226 Phosphoglycerate mutase (EC 5.4.2.1)
Variovorax sp. SCN45 0.62 GFF967 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.74 GFF2569 Phosphoglycerate mutase (EC 5.4.2.11)
Xanthomonas campestris pv. campestris strain 8004 0.60 Xcc-8004.754.1 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.57 Xcc-8004.1763.1 Phosphoglycerate mutase (EC 5.4.2.1)
Rhodanobacter sp. FW510-T8 0.59 OKGIIK_12700 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.68 OKGIIK_16060 gpmA 2,3-diphosphoglycerate-dependent phosphoglycerate mutase 0.59 38
Escherichia coli Nissle 1917 0.58 ECOLIN_RS00640 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.66 ECOLIN_RS04020 2,3-diphosphoglycerate-dependent phosphoglycerate mutase low > 55
Escherichia coli ECRC100 0.58 OKFHMN_10500 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.66 OKFHMN_06735 gpmA 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Escherichia coli BW25113 0.58 b0114 aceE pyruvate dehydrogenase subunit E1 (NCBI) 0.66 b0755 gpmA phosphoglyceromutase (NCBI) low > 76
Escherichia coli ECRC102 0.58 NIAGMN_08350 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.66 NIAGMN_04785 gpmA 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Escherichia coli HS(pFamp)R (ATCC 700891) 0.58 OHPLBJKB_03547 Pyruvate dehydrogenase E1 component 0.66 OHPLBJKB_02958 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
Escherichia coli ECRC62 0.58 BNILDI_08765 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.66 BNILDI_21160 gpmA 2,3-diphosphoglycerate-dependent phosphoglycerate mutase low > 75
Escherichia coli ECRC99 0.58 KEDOAH_17655 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.66 KEDOAH_21230 gpmA 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Escherichia coli ECOR27 0.58 NOLOHH_02845 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.66 NOLOHH_23165 gpmA 2,3-diphosphoglycerate-dependent phosphoglycerate mutase low > 75
Escherichia coli ECRC98 0.58 JDDGAC_14095 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.66 JDDGAC_10390 gpmA 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Escherichia coli ECRC101 0.58 MCAODC_01015 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.66 MCAODC_25955 gpmA 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Escherichia coli BL21 0.58 ECD_00113 pyruvate dehydrogenase, decarboxylase component E1, thiamine triphosphate-binding 0.66 ECD_00708 phosphoglyceromutase 1
Escherichia coli ECOR38 0.58 HEPCGN_08480 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.66 HEPCGN_01540 gpmA 2,3-diphosphoglycerate-dependent phosphoglycerate mutase low > 87
Escherichia fergusonii Becca 0.58 EFB2_03931 Pyruvate dehydrogenase E1 component 0.66 EFB2_03351 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase low > 86
Pectobacterium carotovorum WPP14 0.58 HER17_RS03290 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.64 HER17_RS14800 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Klebsiella michiganensis M5al 0.58 BWI76_RS04880 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.64 BWI76_RS08605 phosphoglyceromutase
Dickeya dadantii 3937 0.58 DDA3937_RS17925 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.65 DDA3937_RS06570 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Rhodanobacter denitrificans MT42 0.58 LRK55_RS10880 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.68 LRK55_RS09465 2,3-diphosphoglycerate-dependent phosphoglycerate mutase low > 63
Rhodanobacter denitrificans FW104-10B01 0.58 LRK54_RS11175 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.68 LRK54_RS09805 2,3-diphosphoglycerate-dependent phosphoglycerate mutase low > 59
Dickeya dianthicola ME23 0.58 DZA65_RS19000 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.64 DZA65_RS06965 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Dickeya dianthicola 67-19 0.58 HGI48_RS17850 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.64 HGI48_RS06610 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Pantoea sp. MT58 0.58 IAI47_15810 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.66 IAI47_13600 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.58 GFF122 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.66 GFF648 Phosphoglycerate mutase (EC 5.4.2.1) low > 78
Enterobacter sp. TBS_079 0.58 MPMX20_00807 Pyruvate dehydrogenase E1 component 0.65 MPMX20_01382 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 0.58 5
Enterobacter asburiae PDN3 0.57 EX28DRAFT_3710 pyruvate dehydrogenase E1 component, homodimeric type 0.64 EX28DRAFT_2240 phosphoglycerate mutase, BPG-dependent, family 1 low > 76
Erwinia tracheiphila SCR3 0.57 LU632_RS03080 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.65 LU632_RS15920 gpmA 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Rahnella sp. WP5 0.57 EX31_RS03480 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.62 EX31_RS23555 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Serratia liquefaciens MT49 0.57 IAI46_21325 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.64 IAI46_06410 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Mycobacterium tuberculosis H37Rv 0.50 Rv2241 Pyruvate dehydrogenase E1 component AceE (pyruvate decarboxylase) (pyruvate dehydrogenase) (pyruvic dehydrogenase) 0.49 Rv0489 Probable phosphoglycerate mutase 1 Gpm1 (phosphoglyceromutase) (PGAM) (BPG-dependent PGAM)
Azospirillum sp. SherDot2 0.09 MPMX19_03172 Pyruvate dehydrogenase E1 component 0.54 MPMX19_04192 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase low > 112
Caulobacter crescentus NA1000 Δfur 0.07 CCNA_01263 pyruvate dehydrogenase E1 component 0.48 CCNA_02344 phosphoglycerate mutase low > 67
Caulobacter crescentus NA1000 0.07 CCNA_01263 pyruvate dehydrogenase E1 component 0.48 CCNA_02344 phosphoglycerate mutase

Not shown: 27 genomes with orthologs for BPHYT_RS12840 only; 17 genomes with orthologs for BPHYT_RS02590 only