Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Burkholderia phytofirmans PsJN | 1.0 | BPHYT_RS14945 | | phosphoglycolate phosphatase | 1.0 | BPHYT_RS01505 | | 7-cyano-7-deazaguanine reductase | 0.29 | 6 |
Paraburkholderia bryophila 376MFSha3.1 | 0.96 | H281DRAFT_03931 | | phosphoglycolate phosphatase | 0.97 | H281DRAFT_02231 | | 7-carboxy-7-deazaguanine synthase, Cx14CxxC type | 0.30 | 55 |
Paraburkholderia graminis OAS925 | 0.95 | ABIE53_003164 | | 2-phosphoglycolate phosphatase | 0.97 | ABIE53_000397 | | 7-carboxy-7-deazaguanine synthase | 0.33 | 87 |
Paraburkholderia sabiae LMG 24235 | 0.88 | QEN71_RS04040 | | HAD-IA family hydrolase | 0.92 | QEN71_RS00205 | | 7-carboxy-7-deazaguanine synthase | low | > 153 |
Ralstonia solanacearum UW163 | 0.58 | UW163_RS16085 | | phosphoglycolate phosphatase | 0.69 | UW163_RS13945 | | 7-carboxy-7-deazaguanine synthase | — | — |
Ralstonia solanacearum IBSBF1503 | 0.58 | RALBFv3_RS13725 | | phosphoglycolate phosphatase | 0.69 | RALBFv3_RS00615 | | 7-carboxy-7-deazaguanine synthase | — | — |
Ralstonia solanacearum PSI07 | 0.57 | RPSI07_RS19745 | | phosphoglycolate phosphatase | 0.70 | RPSI07_RS16890 | | 7-carboxy-7-deazaguanine synthase | — | — |
Ralstonia solanacearum GMI1000 | 0.57 | RS_RS04460 | | phosphoglycolate phosphatase | 0.69 | RS_RS07295 | | 7-carboxy-7-deazaguanine synthase | low | > 80 |
Ralstonia sp. UNC404CL21Col | 0.57 | ABZR87_RS09415 | | HAD-IA family hydrolase | 0.70 | ABZR87_RS12145 | | 7-carboxy-7-deazaguanine synthase | low | > 80 |
Cupriavidus basilensis FW507-4G11 | 0.53 | RR42_RS04430 | | phosphoglycolate phosphatase | 0.72 | RR42_RS11390 | | 7-cyano-7-deazaguanine reductase | — | — |
Acidovorax sp. GW101-3H11 | 0.53 | Ac3H11_2569 | | Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase | 0.60 | Ac3H11_3825 | | Queuosine Biosynthesis QueE Radical SAM | — | — |
Herbaspirillum seropedicae SmR1 | 0.49 | HSERO_RS18455 | | phosphoglycolate phosphatase | 0.66 | HSERO_RS11035 | | 7-cyano-7-deazaguanine reductase | low | > 78 |
Variovorax sp. OAS795 | 0.49 | ABID97_RS09545 | | HAD-IA family hydrolase | 0.60 | ABID97_RS07425 | | 7-carboxy-7-deazaguanine synthase | — | — |
Variovorax sp. SCN45 | 0.48 | GFF6189 | | Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase | 0.61 | GFF2577 | | 7-carboxy-7-deazaguanine synthase (EC 4.3.99.3) | — | — |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.43 | GFF5338 | | Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase | 0.59 | GFF4633 | | Queuosine Biosynthesis QueE Radical SAM | low | > 90 |
Pseudomonas fluorescens SBW25 | 0.38 | PFLU_RS08065 | | N-acetylmuramic acid 6-phosphate phosphatase MupP | 0.19 | PFLU_RS24045 | | 7-carboxy-7-deazaguanine synthase QueE | low | > 109 |
Pseudomonas fluorescens SBW25-INTG | 0.38 | PFLU_RS08065 | | N-acetylmuramic acid 6-phosphate phosphatase MupP | 0.19 | PFLU_RS24045 | | 7-carboxy-7-deazaguanine synthase QueE | low | > 109 |
Pseudomonas sp. RS175 | 0.38 | PFR28_00900 | | N-acetylmuramic acid 6-phosphate phosphatase | 0.19 | PFR28_03404 | | 7-carboxy-7-deazaguanine synthase | low | > 88 |
Pseudomonas fluorescens FW300-N2C3 | 0.38 | AO356_03495 | | phosphoglycolate phosphatase | 0.19 | AO356_18065 | | 7-carboxy-7-deazaguanine synthase | low | > 104 |
Pseudomonas fluorescens FW300-N2E2 | 0.38 | Pf6N2E2_2526 | | Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase | 0.18 | Pf6N2E2_5545 | | Queuosine Biosynthesis QueE Radical SAM | low | > 103 |
Pseudomonas simiae WCS417 | 0.37 | PS417_08095 | | phosphoglycolate phosphatase | 0.19 | PS417_22405 | | 7-carboxy-7-deazaguanine synthase | — | — |
Pseudomonas fluorescens FW300-N2E3 | 0.37 | AO353_02100 | | phosphoglycolate phosphatase | 0.18 | AO353_03540 | | 7-carboxy-7-deazaguanine synthase | low | > 101 |
Xanthomonas campestris pv. campestris strain 8004 | 0.36 | Xcc-8004.2290.1 | | Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase | 0.15 | Xcc-8004.1449.1 | | Queuosine Biosynthesis QueE Radical SAM | low | > 74 |
Pseudomonas fluorescens GW456-L13 | 0.35 | PfGW456L13_2170 | | Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase | 0.19 | PfGW456L13_1861 | | Queuosine Biosynthesis QueE Radical SAM | low | > 87 |
Marinobacter adhaerens HP15 | 0.35 | HP15_1226 | | 2-phosphoglycolate phosphatase, prokaryotic | 0.59 | HP15_3815 | | organic radical activating enzyme | — | — |
Rhodanobacter sp. FW510-T8 | 0.34 | OKGIIK_09515 | gph | phosphoglycolate phosphatase | 0.14 | OKGIIK_01890 | | 7-carboxy-7-deazaguanine synthase | low | > 52 |
Shewanella sp. ANA-3 | 0.32 | Shewana3_1970 | | HAD family hydrolase (RefSeq) | 0.23 | Shewana3_2163 | | radical activating enzyme (RefSeq) | low | > 73 |
Shewanella oneidensis MR-1 | 0.30 | SO2414 | | phosphoglycolate phosphatase, putative (NCBI ptt file) | 0.23 | SO2501 | | radical activating enzyme (NCBI ptt file) | low | > 76 |
Shewanella loihica PV-4 | 0.28 | Shew_1947 | | HAD family hydrolase (RefSeq) | 0.19 | Shew_2061 | | radical SAM domain-containing protein (RefSeq) | — | — |
Shewanella amazonensis SB2B | 0.28 | Sama_1729 | | phosphoglycolate phosphatase (RefSeq) | 0.20 | Sama_1825 | | radical activating enzyme (RefSeq) | low | > 62 |
Sphingomonas koreensis DSMZ 15582 | 0.24 | Ga0059261_3662 | | haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | 0.56 | Ga0059261_3210 | | Organic radical activating enzymes | low | > 68 |
Rhodopseudomonas palustris CGA009 | 0.19 | TX73_010205 | | HAD-IA family hydrolase | 0.61 | TX73_006110 | | 7-carboxy-7-deazaguanine synthase | low | > 86 |
Echinicola vietnamensis KMM 6221, DSM 17526 | 0.14 | Echvi_1029 | | haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | 0.25 | Echvi_4642 | | Organic radical activating enzymes | low | > 79 |
Not shown: 16 genomes with orthologs for BPHYT_RS14945 only; 44 genomes with orthologs for BPHYT_RS01505 only