Conservation of cofitness between BPHYT_RS14945 and BPHYT_RS01505 in Burkholderia phytofirmans PsJN

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS14945 phosphoglycolate phosphatase 1.0 BPHYT_RS01505 7-cyano-7-deazaguanine reductase 0.29 6
Paraburkholderia bryophila 376MFSha3.1 0.96 H281DRAFT_03931 phosphoglycolate phosphatase 0.97 H281DRAFT_02231 7-carboxy-7-deazaguanine synthase, Cx14CxxC type 0.30 55
Paraburkholderia graminis OAS925 0.95 ABIE53_003164 2-phosphoglycolate phosphatase 0.97 ABIE53_000397 7-carboxy-7-deazaguanine synthase 0.33 87
Paraburkholderia sabiae LMG 24235 0.88 QEN71_RS04040 HAD-IA family hydrolase 0.92 QEN71_RS00205 7-carboxy-7-deazaguanine synthase low > 153
Ralstonia solanacearum UW163 0.58 UW163_RS16085 phosphoglycolate phosphatase 0.69 UW163_RS13945 7-carboxy-7-deazaguanine synthase
Ralstonia solanacearum IBSBF1503 0.58 RALBFv3_RS13725 phosphoglycolate phosphatase 0.69 RALBFv3_RS00615 7-carboxy-7-deazaguanine synthase
Ralstonia solanacearum PSI07 0.57 RPSI07_RS19745 phosphoglycolate phosphatase 0.70 RPSI07_RS16890 7-carboxy-7-deazaguanine synthase
Ralstonia solanacearum GMI1000 0.57 RS_RS04460 phosphoglycolate phosphatase 0.69 RS_RS07295 7-carboxy-7-deazaguanine synthase low > 80
Ralstonia sp. UNC404CL21Col 0.57 ABZR87_RS09415 HAD-IA family hydrolase 0.70 ABZR87_RS12145 7-carboxy-7-deazaguanine synthase low > 80
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS04430 phosphoglycolate phosphatase 0.72 RR42_RS11390 7-cyano-7-deazaguanine reductase
Acidovorax sp. GW101-3H11 0.53 Ac3H11_2569 Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase 0.60 Ac3H11_3825 Queuosine Biosynthesis QueE Radical SAM
Herbaspirillum seropedicae SmR1 0.49 HSERO_RS18455 phosphoglycolate phosphatase 0.66 HSERO_RS11035 7-cyano-7-deazaguanine reductase low > 78
Variovorax sp. OAS795 0.49 ABID97_RS09545 HAD-IA family hydrolase 0.60 ABID97_RS07425 7-carboxy-7-deazaguanine synthase
Variovorax sp. SCN45 0.48 GFF6189 Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase 0.61 GFF2577 7-carboxy-7-deazaguanine synthase (EC 4.3.99.3)
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF5338 Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase 0.59 GFF4633 Queuosine Biosynthesis QueE Radical SAM low > 90
Pseudomonas fluorescens SBW25 0.38 PFLU_RS08065 N-acetylmuramic acid 6-phosphate phosphatase MupP 0.19 PFLU_RS24045 7-carboxy-7-deazaguanine synthase QueE low > 109
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS08065 N-acetylmuramic acid 6-phosphate phosphatase MupP 0.19 PFLU_RS24045 7-carboxy-7-deazaguanine synthase QueE low > 109
Pseudomonas sp. RS175 0.38 PFR28_00900 N-acetylmuramic acid 6-phosphate phosphatase 0.19 PFR28_03404 7-carboxy-7-deazaguanine synthase low > 88
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_03495 phosphoglycolate phosphatase 0.19 AO356_18065 7-carboxy-7-deazaguanine synthase low > 104
Pseudomonas fluorescens FW300-N2E2 0.38 Pf6N2E2_2526 Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase 0.18 Pf6N2E2_5545 Queuosine Biosynthesis QueE Radical SAM low > 103
Pseudomonas simiae WCS417 0.37 PS417_08095 phosphoglycolate phosphatase 0.19 PS417_22405 7-carboxy-7-deazaguanine synthase
Pseudomonas fluorescens FW300-N2E3 0.37 AO353_02100 phosphoglycolate phosphatase 0.18 AO353_03540 7-carboxy-7-deazaguanine synthase low > 101
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.2290.1 Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase 0.15 Xcc-8004.1449.1 Queuosine Biosynthesis QueE Radical SAM low > 74
Pseudomonas fluorescens GW456-L13 0.35 PfGW456L13_2170 Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase 0.19 PfGW456L13_1861 Queuosine Biosynthesis QueE Radical SAM low > 87
Marinobacter adhaerens HP15 0.35 HP15_1226 2-phosphoglycolate phosphatase, prokaryotic 0.59 HP15_3815 organic radical activating enzyme
Rhodanobacter sp. FW510-T8 0.34 OKGIIK_09515 gph phosphoglycolate phosphatase 0.14 OKGIIK_01890 7-carboxy-7-deazaguanine synthase low > 52
Shewanella sp. ANA-3 0.32 Shewana3_1970 HAD family hydrolase (RefSeq) 0.23 Shewana3_2163 radical activating enzyme (RefSeq) low > 73
Shewanella oneidensis MR-1 0.30 SO2414 phosphoglycolate phosphatase, putative (NCBI ptt file) 0.23 SO2501 radical activating enzyme (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.28 Shew_1947 HAD family hydrolase (RefSeq) 0.19 Shew_2061 radical SAM domain-containing protein (RefSeq)
Shewanella amazonensis SB2B 0.28 Sama_1729 phosphoglycolate phosphatase (RefSeq) 0.20 Sama_1825 radical activating enzyme (RefSeq) low > 62
Sphingomonas koreensis DSMZ 15582 0.24 Ga0059261_3662 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 0.56 Ga0059261_3210 Organic radical activating enzymes low > 68
Rhodopseudomonas palustris CGA009 0.19 TX73_010205 HAD-IA family hydrolase 0.61 TX73_006110 7-carboxy-7-deazaguanine synthase low > 86
Echinicola vietnamensis KMM 6221, DSM 17526 0.14 Echvi_1029 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 0.25 Echvi_4642 Organic radical activating enzymes low > 79

Not shown: 16 genomes with orthologs for BPHYT_RS14945 only; 44 genomes with orthologs for BPHYT_RS01505 only