Conservation of cofitness between Atu2333 and Atu1759 in Agrobacterium fabrum C58

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu2333 ATP-dependent RNA helicase 1.0 Atu1759 L-serine dehydratase 0.31 8
Rhizobium sp. OAE497 0.62 ABIE40_RS13915 DEAD/DEAH box helicase 0.80 ABIE40_RS09785 L-serine ammonia-lyase low > 107
Sinorhizobium meliloti 1021 0.59 SM_b20880 ATP-dependent RNA helicase 0.79 SMc01256 L-serine dehydratase low > 103
Phaeobacter inhibens DSM 17395 0.46 PGA1_c11390 putative ATP-dependent RNA helicase RhlE 0.57 PGA1_c23770 L-serine dehydratase TdcG low > 62
Dinoroseobacter shibae DFL-12 0.44 Dshi_2715 DEAD/DEAH box helicase domain protein (RefSeq) 0.60 Dshi_5008 L-serine dehydratase (NCBI) low > 64
Sphingomonas koreensis DSMZ 15582 0.41 Ga0059261_0964 Superfamily II DNA and RNA helicases 0.43 Ga0059261_0220 L-serine dehydratase, iron-sulfur-dependent, single chain form low > 68
Azospirillum sp. SherDot2 0.38 MPMX19_02097 ATP-dependent RNA helicase RhlE 0.58 MPMX19_04703 L-serine dehydratase TdcG 0.38 105
Dickeya dadantii 3937 0.37 DDA3937_RS08645 ATP-dependent RNA helicase RhlE 0.43 DDA3937_RS11265 L-serine ammonia-lyase low > 74
Dickeya dianthicola 67-19 0.37 HGI48_RS08785 ATP-dependent RNA helicase RhlE 0.42 HGI48_RS11300 L-serine ammonia-lyase low > 71
Erwinia tracheiphila SCR3 0.37 LU632_RS09215 rhlE ATP-dependent RNA helicase RhlE 0.43 LU632_RS13185 sdaA L-serine ammonia-lyase 0.78 11
Dickeya dianthicola ME23 0.37 DZA65_RS09075 ATP-dependent RNA helicase RhlE 0.42 DZA65_RS16005 L-serine ammonia-lyase low > 75
Phocaeicola dorei CL03T12C01 0.37 ABI39_RS02170 DEAD/DEAH box helicase 0.29 ABI39_RS12245 L-serine ammonia-lyase low > 72
Pectobacterium carotovorum WPP14 0.37 HER17_RS13325 ATP-dependent RNA helicase RhlE 0.43 HER17_RS11315 L-serine ammonia-lyase low > 75
Rahnella sp. WP5 0.37 EX31_RS23775 ATP-dependent RNA helicase RhlE 0.42 EX31_RS24715 L-serine ammonia-lyase low > 89
Escherichia coli BL21 0.37 ECD_00764 ATP-dependent RNA helicase 0.42 ECD_02642 L-serine dehydratase 2 low > 60
Escherichia coli ECRC101 0.37 OKFHMN_06290 rhlE ATP-dependent RNA helicase RhlE 0.42 OKFHMN_20175 sdaB L-serine ammonia-lyase II — —
Escherichia fergusonii Becca 0.37 EFB2_03308 ATP-dependent RNA helicase RhlE 0.42 EFB2_01120 L-serine dehydratase 2 low > 86
Escherichia coli ECRC62 0.37 BNILDI_20925 rhlE ATP-dependent RNA helicase RhlE 0.42 BNILDI_10560 sdaB L-serine ammonia-lyase II — —
Escherichia coli BW25113 0.37 b0797 rhlE RNA helicase (NCBI) 0.42 b2797 sdaB L-serine deaminase II (NCBI) low > 76
Escherichia coli ECOR38 0.37 HEPCGN_01750 rhlE ATP-dependent RNA helicase RhlE 0.42 HEPCGN_19430 sdaB L-serine ammonia-lyase II low > 85
Escherichia coli ECRC99 0.37 KEDOAH_21620 rhlE ATP-dependent RNA helicase RhlE 0.42 KEDOAH_07955 sdaB L-serine ammonia-lyase II — —
Escherichia coli ECRC101 0.37 MCAODC_25505 rhlE ATP-dependent RNA helicase RhlE 0.42 MCAODC_10700 sdaB L-serine ammonia-lyase II — —
Escherichia coli ECRC102 0.37 NIAGMN_04335 rhlE ATP-dependent RNA helicase RhlE 0.42 NIAGMN_17945 sdaB L-serine ammonia-lyase II — —
Enterobacter sp. TBS_079 0.37 MPMX20_01425 ATP-dependent RNA helicase RhlE 0.43 MPMX20_02719 L-serine dehydratase 1 low > 85
Escherichia coli Nissle 1917 0.37 ECOLIN_RS04245 ATP-dependent RNA helicase RhlE 0.42 ECOLIN_RS15595 L-serine ammonia-lyase II low > 52
Escherichia coli ECRC98 0.37 JDDGAC_09925 rhlE ATP-dependent RNA helicase RhlE 0.42 JDDGAC_23840 sdaB L-serine ammonia-lyase II — —
Escherichia coli ECOR27 0.37 NOLOHH_22645 rhlE ATP-dependent RNA helicase RhlE 0.42 NOLOHH_12055 sdaB L-serine ammonia-lyase II low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.37 OHPLBJKB_02916 ATP-dependent RNA helicase RhlE 0.42 OHPLBJKB_00934 L-serine dehydratase 2 low > 73
Enterobacter asburiae PDN3 0.37 EX28DRAFT_2194 Superfamily II DNA and RNA helicases 0.43 EX28DRAFT_0745 L-serine dehydratase, iron-sulfur-dependent, single chain form low > 76
Phocaeicola vulgatus CL09T03C04 0.37 HMPREF1058_RS02855 DEAD/DEAH box helicase 0.29 HMPREF1058_RS16410 L-serine ammonia-lyase low > 67
Pantoea sp. MT58 0.36 IAI47_13435 ATP-dependent RNA helicase RhlE 0.44 IAI47_08785 L-serine ammonia-lyase low > 76
Ralstonia solanacearum GMI1000 0.35 RS_RS02695 RNA helicase 0.48 RS_RS17410 L-serine ammonia-lyase low > 80
Shewanella amazonensis SB2B 0.35 Sama_2687 DEAD-box ATP dependent DNA helicase (RefSeq) 0.50 Sama_1325 L-serine ammonia-lyase (RefSeq) low > 62
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS02870 RNA helicase 0.49 RR42_RS20080 L-serine ammonia-lyase (EC 4.3.1.17) (from data) low > 128
Ralstonia solanacearum PSI07 0.35 RPSI07_RS21325 RNA helicase 0.49 RPSI07_RS08570 L-serine ammonia-lyase low > 81
Paraburkholderia graminis OAS925 0.35 ABIE53_003462 ATP-dependent RNA helicase RhlE 0.48 ABIE53_006160 L-serine dehydratase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.35 H281DRAFT_04222 ATP-dependent RNA helicase RhlE 0.48 H281DRAFT_02455 L-serine ammonia-lyase low > 103
Ralstonia sp. UNC404CL21Col 0.35 ABZR87_RS07850 DEAD/DEAH box helicase 0.46 ABZR87_RS03940 L-serine ammonia-lyase low > 80
Ralstonia solanacearum UW163 0.34 UW163_RS01715 RNA helicase 0.47 UW163_RS04945 L-serine ammonia-lyase — —
Ralstonia solanacearum IBSBF1503 0.34 RALBFv3_RS11875 RNA helicase 0.47 RALBFv3_RS08665 L-serine ammonia-lyase low > 76
Paraburkholderia sabiae LMG 24235 0.34 QEN71_RS02265 DEAD/DEAH box helicase 0.48 QEN71_RS08035 L-serine ammonia-lyase low > 153
Castellaniella sp019104865 MT123 0.34 ABCV34_RS07925 DEAD/DEAH box helicase 0.47 ABCV34_RS14845 L-serine ammonia-lyase low > 48
Xanthomonas campestris pv. campestris strain 8004 0.33 Xcc-8004.4527.1 ATP-dependent RNA helicase RhlE 0.51 Xcc-8004.1601.1 L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) 0.38 53
Dyella japonica UNC79MFTsu3.2 0.33 ABZR86_RS08975 DEAD/DEAH box helicase 0.50 ABZR86_RS19060 L-serine ammonia-lyase low > 74
Rhodanobacter denitrificans MT42 0.32 LRK55_RS02395 DEAD/DEAH box helicase 0.51 LRK55_RS05035 L-serine ammonia-lyase low > 63
Rhodanobacter denitrificans FW104-10B01 0.32 LRK54_RS02640 DEAD/DEAH box helicase 0.51 LRK54_RS05255 L-serine ammonia-lyase low > 59
Rhodanobacter sp. FW510-T8 0.32 OKGIIK_09690 srmB RNA helicase 0.49 OKGIIK_01565 sdaA L-serine ammonia-lyase low > 52

Not shown: 6 genomes with orthologs for Atu2333 only; 40 genomes with orthologs for Atu1759 only