Conservation of cofitness between Atu4000 and Atu1686 in Agrobacterium fabrum C58

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu4000 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 1.0 Atu1686 peptidyl-prolyl cis-trans isomerse D 0.68 20
Rhizobium sp. OAE497 0.69 ABIE40_RS21060 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.58 ABIE40_RS09540 peptidylprolyl isomerase low > 107
Rhodopseudomonas palustris CGA009 0.62 TX73_015405 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.29 TX73_014975 SurA N-terminal domain-containing protein low > 86
Sphingomonas koreensis DSMZ 15582 0.54 Ga0059261_3674 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.09 Ga0059261_0255 SurA N-terminal domain/PPIC-type PPIASE domain 0.39 37
Magnetospirillum magneticum AMB-1 0.40 AMB_RS13895 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.21 AMB_RS09180 peptidylprolyl isomerase — —
Azospirillum brasilense Sp245 0.37 AZOBR_RS31120 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.18 AZOBR_RS07495 peptidylprolyl isomerase low > 97
Dyella japonica UNC79MFTsu3.2 0.36 ABZR86_RS10225 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.07 ABZR86_RS07300 SurA N-terminal domain-containing protein low > 74
Rhodanobacter denitrificans MT42 0.35 LRK55_RS03920 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.07 LRK55_RS16480 SurA N-terminal domain-containing protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.34 LRK54_RS04150 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.07 LRK54_RS16755 SurA N-terminal domain-containing protein low > 59
Rhodanobacter sp. FW510-T8 0.34 OKGIIK_11015 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.08 OKGIIK_08010 Peptidylprolyl isomerase low > 52
Marinobacter adhaerens HP15 0.33 HP15_2925 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.09 HP15_2181 PpiC-type peptidyl-prolyl cis-trans isomerase low > 73
Ralstonia solanacearum PSI07 0.33 RPSI07_RS16705 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.10 RPSI07_RS16155 peptidylprolyl isomerase low > 81
Ralstonia solanacearum GMI1000 0.33 RS_RS07430 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.09 RS_RS08675 peptidyl-prolyl cis-trans isomerase low > 80
Ralstonia solanacearum IBSBF1503 0.33 RALBFv3_RS00815 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.10 RALBFv3_RS01320 peptidylprolyl isomerase low > 76
Ralstonia sp. UNC404CL21Col 0.33 ABZR87_RS12335 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.08 ABZR87_RS12765 SurA N-terminal domain-containing protein low > 80
Ralstonia solanacearum UW163 0.33 UW163_RS14150 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.10 UW163_RS14630 peptidylprolyl isomerase — —
Desulfovibrio vulgaris Miyazaki F 0.32 DvMF_1002 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) 0.10 DvMF_3022 PpiC-type peptidyl-prolyl cis-trans isomerase (RefSeq) low > 51
Vibrio cholerae E7946 ATCC 55056 0.31 CSW01_05640 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA 0.11 CSW01_09595 peptidylprolyl isomerase low > 62
Caulobacter crescentus NA1000 Δfur 0.30 CCNA_01648 adenosylmethionine-8-amino-7-oxononanoate 0.16 CCNA_01971 peptidyl-prolyl cis-trans isomerase low > 67
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.30 GFF670 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.09 GFF4357 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) low > 78
Cupriavidus basilensis FW507-4G11 0.30 RR42_RS00925 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA 0.08 RR42_RS09045 peptidylprolyl isomerase low > 128
Caulobacter crescentus NA1000 0.30 CCNA_01648 adenosylmethionine-8-amino-7-oxononanoate 0.16 CCNA_01971 peptidyl-prolyl cis-trans isomerase low > 66
Dickeya dianthicola 67-19 0.30 HGI48_RS08670 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.08 HGI48_RS05705 peptidylprolyl isomerase low > 71
Enterobacter asburiae PDN3 0.30 EX28DRAFT_2217 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.10 EX28DRAFT_2529 Parvulin-like peptidyl-prolyl isomerase low > 76
Alteromonas macleodii MIT1002 0.30 MIT1002_01378 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.10 MIT1002_02755 Peptidyl-prolyl cis-trans isomerase D low > 70
Paraburkholderia sabiae LMG 24235 0.30 QEN71_RS01100 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.09 QEN71_RS21955 SurA N-terminal domain-containing protein — —
Castellaniella sp019104865 MT123 0.30 ABCV34_RS15300 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.08 ABCV34_RS03085 SurA N-terminal domain-containing protein — —
Erwinia tracheiphila SCR3 0.30 LU632_RS09125 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.08 LU632_RS18325 ppiD peptidylprolyl isomerase — —
Enterobacter sp. TBS_079 0.29 MPMX20_01402 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.10 MPMX20_01032 Peptidyl-prolyl cis-trans isomerase D low > 85
Dickeya dadantii 3937 0.29 DDA3937_RS08505 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.09 DDA3937_RS05660 peptidylprolyl isomerase low > 74
Shewanella sp. ANA-3 0.27 Shewana3_2520 aminotransferase (RefSeq) 0.10 Shewana3_2657 PpiC-type peptidyl-prolyl cis-trans isomerase (RefSeq) — —
Shewanella loihica PV-4 0.27 Shew_1718 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) 0.08 Shew_2504 PpiC-type peptidyl-prolyl cis-trans isomerase (RefSeq) — —
Phaeobacter inhibens DSM 17395 0.27 PGA1_c09150 adenosylmethionine-8-amino-7-oxononanoate aminotransferase BioA 0.14 PGA1_c16850 putative peptidyl-prolyl cis-trans isomerase D low > 62
Shewanella oneidensis MR-1 0.26 SO2741 bioA adenosylmethionine--8-amino-7-oxononanoate aminotransferase (NCBI ptt file) 0.10 SO1798 ppiD peptidyl-prolyl cis-trans isomerase D (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.26 Sama_1437 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) 0.09 Sama_1228 peptidyl-prolyl cis-trans isomerase D (RefSeq) — —

Not shown: 55 genomes with orthologs for Atu4000 only; 7 genomes with orthologs for Atu1686 only