Conservation of cofitness between AMB_RS06360 and AMB_RS15450 in Magnetospirillum magneticum AMB-1

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Magnetospirillum magneticum AMB-1 1.0 AMB_RS06360 EamA family transporter RarD 1.0 AMB_RS15450 sulfoxide reductase heme-binding subunit YedZ 0.75 11
Serratia liquefaciens MT49 0.44 IAI46_00755 EamA family transporter RarD 0.22 IAI46_22740 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 86
Enterobacter asburiae PDN3 0.44 EX28DRAFT_4484 rarD protein 0.26 EX28DRAFT_3305 Predicted membrane protein low > 76
Escherichia fergusonii Becca 0.44 EFB2_04818 Protein RarD 0.24 EFB2_01978 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 86
Escherichia coli BW25113 0.44 b3819 rarD predicted chloramphenical resistance permease (NCBI) 0.27 b1972 yedZ hypothetical protein (NCBI) low > 76
Escherichia coli ECOR38 0.44 HEPCGN_13075 rarD EamA family transporter RarD 0.25 HEPCGN_03910 msrQ protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 87
Escherichia coli ECOR27 0.44 NOLOHH_06505 rarD EamA family transporter RarD 0.26 NOLOHH_16180 msrQ protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.44 OHPLBJKB_04232 Protein RarD 0.27 OHPLBJKB_01757 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 73
Escherichia coli BL21 0.44 ECD_03698 putative chloramphenical resistance permease 0.28 ECD_01887 inner membrane heme subunit for periplasmic YedYZ reductase low > 61
Escherichia coli ECRC62 0.44 BNILDI_05025 rarD EamA family transporter RarD 0.27 BNILDI_14970 msrQ protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 75
Escherichia coli ECRC99 0.44 KEDOAH_13775 rarD EamA family transporter RarD 0.27 KEDOAH_02545 msrQ protein-methionine-sulfoxide reductase heme-binding subunit MsrQ — —
Escherichia coli ECRC100 0.44 OKFHMN_14375 rarD EamA family transporter RarD 0.27 OKFHMN_25550 msrQ protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 80
Escherichia coli ECRC102 0.44 NIAGMN_12130 rarD EamA family transporter RarD 0.27 NIAGMN_02505 msrQ protein-methionine-sulfoxide reductase heme-binding subunit MsrQ — —
Pectobacterium carotovorum WPP14 0.44 HER17_RS01380 EamA family transporter RarD 0.18 HER17_RS20190 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 75
Escherichia coli ECRC101 0.44 MCAODC_04880 rarD EamA family transporter RarD 0.27 MCAODC_19845 msrQ protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 87
Escherichia coli ECRC98 0.44 JDDGAC_18000 rarD EamA family transporter RarD 0.27 JDDGAC_00135 msrQ protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 86
Enterobacter sp. TBS_079 0.44 MPMX20_04461 Protein RarD 0.25 MPMX20_04161 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 85
Escherichia coli Nissle 1917 0.44 ECOLIN_RS21920 EamA family transporter RarD 0.24 ECOLIN_RS11205 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ — —
Dickeya dadantii 3937 0.43 DDA3937_RS19865 EamA family transporter RarD 0.24 DDA3937_RS01410 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 74
Dickeya dianthicola 67-19 0.43 HGI48_RS20020 EamA family transporter RarD 0.24 HGI48_RS01330 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF245 Protein rarD 0.25 GFF2130 FIG001196: Membrane protein YedZ low > 78
Shewanella sp. ANA-3 0.42 Shewana3_3765 transporter DMT superfamily protein (RefSeq) 0.26 Shewana3_2233 putative sulfite oxidase subunit YedZ (RefSeq) low > 73
Dickeya dianthicola ME23 0.42 DZA65_RS21060 EamA family transporter RarD 0.24 DZA65_RS01390 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 75
Shewanella oneidensis MR-1 0.42 SO4243 rarD rarD protein (NCBI ptt file) 0.25 SO2043 conserved hypothetical protein (NCBI ptt file) low > 76
Pseudomonas simiae WCS417 0.41 PS417_26030 chloramphenical resistance permease RarD 0.23 PS417_23785 sulfite oxidase low > 88
Pantoea sp. MT58 0.41 IAI47_18375 EamA family transporter RarD 0.18 IAI47_02420 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 76
Klebsiella michiganensis M5al 0.41 BWI76_RS01230 chloramphenicol resistance permease RarD 0.27 BWI76_RS25520 sulfoxide reductase heme-binding subunit YedZ low > 92
Pseudomonas putida KT2440 0.40 PP_0358 conserved membrane protein of unknown function 0.26 PP_4675 methionine sulfoxide reductase heme-binding subunit low > 96
Ralstonia sp. UNC404CL21Col 0.40 ABZR87_RS08060 EamA family transporter RarD 0.38 ABZR87_RS02645 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 80
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_14110 Putative D-serine transporter (from data) 0.23 AO356_16195 sulfite oxidase low > 104
Paraburkholderia sabiae LMG 24235 0.38 QEN71_RS26035 EamA family transporter RarD 0.42 QEN71_RS28085 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 153
Ralstonia solanacearum GMI1000 0.38 RS_RS02855 EamA family transporter RarD 0.37 RS_RS14935 sulfoxide reductase heme-binding subunit YedZ low > 80
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS20410 transporter 0.34 RR42_RS19055 sulfite oxidase low > 128
Ralstonia solanacearum IBSBF1503 0.36 RALBFv3_RS12170 EamA family transporter RarD 0.37 RALBFv3_RS06995 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 76
Ralstonia solanacearum UW163 0.36 UW163_RS01440 EamA family transporter RarD 0.37 UW163_RS06620 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ — —
Azospirillum brasilense Sp245 0.36 AZOBR_RS04315 transporter 0.41 AZOBR_RS29835 sulfite oxidase low > 97
Rhizobium sp. OAE497 0.34 ABIE40_RS06215 EamA family transporter RarD 0.32 ABIE40_RS07995 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ 0.63 55
Ralstonia solanacearum PSI07 0.34 RPSI07_RS21160 EamA family transporter RarD 0.38 RPSI07_RS10245 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 81
Rhodospirillum rubrum S1H 0.33 Rru_A0706 RarD protein (NCBI) 0.43 Rru_A0594 Protein of unknown function UPF0191 (NCBI) low > 58
Acidovorax sp. GW101-3H11 0.33 Ac3H11_4000 RarD protein, DMT superfamily transporter 0.33 Ac3H11_2977 FIG001196: Membrane protein YedZ low > 79
Herbaspirillum seropedicae SmR1 0.32 HSERO_RS23555 membrane protein 0.41 HSERO_RS15305 sulfite oxidase low > 78
Agrobacterium fabrum C58 0.32 Atu1068 hypothetical protein 0.32 Atu1920 hypothetical protein low > 89
Xanthomonas campestris pv. campestris strain 8004 0.32 Xcc-8004.4969.1 RarD protein, chloamphenicol sensitive 0.39 Xcc-8004.3285.1 FIG001196: Membrane protein YedZ low > 74
Lysobacter sp. OAE881 0.31 ABIE51_RS03205 EamA family transporter RarD 0.43 ABIE51_RS12160 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 62
Castellaniella sp019104865 MT123 0.18 ABCV34_RS08310 EamA family transporter RarD 0.23 ABCV34_RS15015 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 48
Burkholderia phytofirmans PsJN 0.16 BPHYT_RS34860 chemotaxis protein 0.39 BPHYT_RS17935 sulfite oxidase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.14 H281DRAFT_03622 chloramphenicol-sensitive protein RarD 0.38 H281DRAFT_05605 sulfoxide reductase heme-binding subunit YedZ low > 103
Paraburkholderia graminis OAS925 0.14 ABIE53_004634 chloramphenicol-sensitive protein RarD 0.38 ABIE53_003750 sulfoxide reductase heme-binding subunit YedZ low > 113

Not shown: 31 genomes with orthologs for AMB_RS06360 only; 5 genomes with orthologs for AMB_RS15450 only