Conservation of cofitness between ABZR87_RS14930 and ABZR87_RS05700 in Ralstonia sp. UNC404CL21Col

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Ralstonia sp. UNC404CL21Col 1.0 ABZR87_RS14930 2-isopropylmalate synthase 1.0 ABZR87_RS05700 tRNA 2-thiocytidine(32) synthetase TtcA 0.31 17
Ralstonia solanacearum GMI1000 0.99 RS_RS10395 2-isopropylmalate synthase 0.93 RS_RS00865 tRNA 2-thiocytidine(32) synthetase TtcA low > 80
Ralstonia solanacearum UW163 0.97 UW163_RS10700 2-isopropylmalate synthase 0.93 UW163_RS03335 tRNA 2-thiocytidine(32) synthetase TtcA — —
Ralstonia solanacearum IBSBF1503 0.97 RALBFv3_RS03025 2-isopropylmalate synthase 0.93 RALBFv3_RS10245 tRNA 2-thiocytidine(32) synthetase TtcA low > 76
Ralstonia solanacearum PSI07 0.96 RPSI07_RS14285 2-isopropylmalate synthase 0.93 RPSI07_RS23130 tRNA 2-thiocytidine(32) synthetase TtcA low > 81
Cupriavidus basilensis FW507-4G11 0.89 RR42_RS05465 2-isopropylmalate synthase 0.81 RR42_RS01445 tRNA 2-thiocytidine biosynthesis protein TtcA low > 128
Burkholderia phytofirmans PsJN 0.86 BPHYT_RS06570 2-isopropylmalate synthase 0.55 BPHYT_RS18570 tRNA 2-thiocytidine biosynthesis protein TtcA low > 109
Paraburkholderia graminis OAS925 0.85 ABIE53_001580 2-isopropylmalate synthase 0.55 ABIE53_000036 tRNA 2-thiocytidine biosynthesis protein TtcA low > 113
Paraburkholderia bryophila 376MFSha3.1 0.85 H281DRAFT_04556 2-isopropylmalate synthase 0.56 H281DRAFT_05824 tRNA s(2)C-32 sulfurtransferase low > 103
Paraburkholderia sabiae LMG 24235 0.85 QEN71_RS24195 2-isopropylmalate synthase 0.55 QEN71_RS28595 tRNA 2-thiocytidine(32) synthetase TtcA low > 153
Hydrogenophaga sp. GW460-11-11-14-LB1 0.80 GFF4281 2-isopropylmalate synthase (EC 2.3.3.13) 0.56 GFF1658 tRNA(Cytosine32)-2-thiocytidine synthetase low > 90
Acidovorax sp. GW101-3H11 0.80 Ac3H11_530 2-isopropylmalate synthase (EC 2.3.3.13) 0.58 Ac3H11_1817 tRNA(Cytosine32)-2-thiocytidine synthetase low > 79
Variovorax sp. OAS795 0.79 ABID97_RS14910 2-isopropylmalate synthase 0.59 ABID97_RS06505 tRNA 2-thiocytidine(32) synthetase TtcA low > 91
Variovorax sp. SCN45 0.79 GFF1165 2-isopropylmalate synthase (EC 2.3.3.13) 0.58 GFF7310 tRNA-(cytosine32)-2-thiocytidine synthetase TtcA low > 127
Dechlorosoma suillum PS 0.70 Dsui_3519 2-isopropylmalate synthase, bacterial type 0.63 Dsui_0695 putative ATPase of the PP-loop superfamily implicated in cell cycle control low > 51
Pseudomonas stutzeri RCH2 0.63 Psest_1056 2-isopropylmalate synthase, bacterial type 0.59 Psest_3033 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control low > 67
Phaeobacter inhibens DSM 17395 0.49 PGA1_c26470 2-isopropylmalate synthase LeuA 0.44 PGA1_c02110 tRNA 2-thiocytidine biosynthesis protein TtcA low > 62
Rahnella sp. WP5 0.46 EX31_RS03680 2-isopropylmalate synthase 0.59 EX31_RS06375 tRNA 2-thiocytidine(32) synthetase TtcA low > 89
Dinoroseobacter shibae DFL-12 0.46 Dshi_0596 2-isopropylmalate synthase (RefSeq) 0.43 Dshi_0330 PP-loop domain protein (RefSeq) low > 64
Shewanella oneidensis MR-1 0.46 SO4236 leuA 2-isopropylmalate synthase (NCBI ptt file) 0.56 SO2354 conserved hypothetical protein (NCBI ptt file) low > 76
Serratia liquefaciens MT49 0.46 IAI46_03355 2-isopropylmalate synthase 0.59 IAI46_13420 tRNA 2-thiocytidine(32) synthetase TtcA low > 86
Alteromonas macleodii MIT1002 0.44 MIT1002_00949 2-isopropylmalate synthase 0.61 MIT1002_02139 tRNA 2-thiocytidine biosynthesis protein TtcA low > 70
Escherichia fergusonii Becca 0.44 EFB2_03971 2-isopropylmalate synthase 0.60 EFB2_02583 tRNA-cytidine(32) 2-sulfurtransferase low > 86
Escherichia coli BL21 0.44 ECD_00076 2-isopropylmalate synthase 0.61 ECD_01321 tRNA s(2)C32 thioltransferase, iron sulfur cluster protein low > 61
Escherichia coli BW25113 0.44 b0074 leuA 2-isopropylmalate synthase (NCBI) 0.61 b1344 ydaO predicted C32 tRNA thiolase (NCBI) low > 76
Escherichia coli ECOR27 0.44 NOLOHH_03060 2-isopropylmalate synthase 0.61 NOLOHH_19870 ttcA tRNA 2-thiocytidine(32) synthetase TtcA low > 75
Escherichia coli ECRC101 0.44 MCAODC_01230 2-isopropylmalate synthase 0.61 MCAODC_16100 ttcA tRNA 2-thiocytidine(32) synthetase TtcA low > 87
Escherichia coli ECRC100 0.44 OKFHMN_10715 2-isopropylmalate synthase 0.61 OKFHMN_02155 ttcA tRNA 2-thiocytidine(32) synthetase TtcA — —
Escherichia coli ECRC102 0.44 NIAGMN_08565 2-isopropylmalate synthase 0.61 NIAGMN_26325 ttcA tRNA 2-thiocytidine(32) synthetase TtcA — —
Escherichia coli Nissle 1917 0.44 ECOLIN_RS00400 2-isopropylmalate synthase 0.60 ECOLIN_RS08065 tRNA 2-thiocytidine(32) synthetase TtcA — —
Escherichia coli ECRC99 0.44 KEDOAH_17440 2-isopropylmalate synthase 0.61 KEDOAH_26600 ttcA tRNA 2-thiocytidine(32) synthetase TtcA — —
Escherichia coli ECOR38 0.44 HEPCGN_08695 2-isopropylmalate synthase 0.61 HEPCGN_26005 ttcA tRNA 2-thiocytidine(32) synthetase TtcA low > 87
Escherichia coli ECRC62 0.44 BNILDI_08550 2-isopropylmalate synthase 0.61 BNILDI_18020 ttcA tRNA 2-thiocytidine(32) synthetase TtcA low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.44 OHPLBJKB_03583 2-isopropylmalate synthase 0.61 OHPLBJKB_02337 tRNA-cytidine(32) 2-sulfurtransferase low > 73
Escherichia coli ECRC98 0.44 JDDGAC_14310 2-isopropylmalate synthase 0.61 JDDGAC_04715 ttcA tRNA 2-thiocytidine(32) synthetase TtcA low > 86
Pantoea sp. MT58 0.44 IAI47_16000 2-isopropylmalate synthase 0.60 IAI47_09475 tRNA 2-thiocytidine(32) synthetase TtcA low > 76
Pectobacterium carotovorum WPP14 0.43 HER17_RS03085 2-isopropylmalate synthase 0.59 HER17_RS09605 tRNA 2-thiocytidine(32) synthetase TtcA low > 75
Vibrio cholerae E7946 ATCC 55056 0.43 CSW01_12595 2-isopropylmalate synthase 0.60 CSW01_07180 tRNA 2-thiocytidine(32) synthetase TtcA low > 62
Klebsiella michiganensis M5al 0.43 BWI76_RS04680 2-isopropylmalate synthase 0.60 BWI76_RS12710 tRNA 2-thiocytidine(32) synthetase TtcA low > 92
Enterobacter sp. TBS_079 0.43 MPMX20_00769 2-isopropylmalate synthase 0.60 MPMX20_02440 tRNA-cytidine(32) 2-sulfurtransferase low > 85
Dickeya dianthicola ME23 0.43 DZA65_RS19200 2-isopropylmalate synthase 0.60 DZA65_RS12850 tRNA 2-thiocytidine(32) synthetase TtcA low > 75
Erwinia tracheiphila SCR3 0.43 LU632_RS02880 leuA 2-isopropylmalate synthase 0.55 LU632_RS12165 ttcA tRNA 2-thiocytidine(32) synthetase TtcA low > 74
Enterobacter asburiae PDN3 0.43 EX28DRAFT_3670 2-isopropylmalate synthase (EC 2.3.3.13) 0.60 EX28DRAFT_1007 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control low > 76
Dickeya dianthicola 67-19 0.43 HGI48_RS18055 2-isopropylmalate synthase 0.60 HGI48_RS12410 tRNA 2-thiocytidine(32) synthetase TtcA low > 71
Dickeya dadantii 3937 0.43 DDA3937_RS18115 2-isopropylmalate synthase 0.60 DDA3937_RS12330 tRNA 2-thiocytidine(32) synthetase TtcA low > 74
Xanthomonas campestris pv. campestris strain 8004 0.41 Xcc-8004.1056.1 2-isopropylmalate synthase (EC 2.3.3.13) 0.51 Xcc-8004.5211.1 tRNA(Cytosine32)-2-thiocytidine synthetase low > 74
Rhodanobacter sp. FW510-T8 0.41 OKGIIK_13575 leuA 2-isopropylmalate synthase 0.52 OKGIIK_13200 ttcA tRNA 2-thiocytidine(32) synthetase TtcA low > 52
Sinorhizobium meliloti 1021 0.13 SMc02546 alpha-isopropylmalate/homocitrate synthase family transferase 0.45 SMc00534 C32 tRNA thiolase low > 103
Rhizobium sp. OAE497 0.12 ABIE40_RS06220 citramalate synthase 0.43 ABIE40_RS10230 tRNA 2-thiocytidine(32) synthetase TtcA low > 107

Not shown: 24 genomes with orthologs for ABZR87_RS14930 only; 19 genomes with orthologs for ABZR87_RS05700 only