Conservation of cofitness between ABZR87_RS15930 and ABZR87_RS03450 in Ralstonia sp. UNC404CL21Col

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Ralstonia sp. UNC404CL21Col 1.0 ABZR87_RS15930 sigma-54-dependent Fis family transcriptional regulator 1.0 ABZR87_RS03450 type II secretion system secretin GspD 0.53 9
Cupriavidus basilensis FW507-4G11 0.73 RR42_RS11445 Fis family transcriptional regulator 0.55 RR42_RS19520 general secretion pathway protein GspD low > 128
Hydrogenophaga sp. GW460-11-11-14-LB1 0.53 GFF5398 Nitrogen regulation protein NR(I) 0.38 GFF1390 General secretion pathway protein D low > 90
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS30230 sigma-54-dependent Fis family transcriptional regulator 0.19 QEN71_RS29510 type II secretion system secretin GspD low > 153
Paraburkholderia bryophila 376MFSha3.1 0.52 H281DRAFT_00325 GAF modulated sigma54 specific transcriptional regulator, Fis family 0.38 H281DRAFT_02356 general secretion pathway protein D low > 103
Paraburkholderia graminis OAS925 0.52 ABIE53_004383 transcriptional regulator of acetoin/glycerol metabolism 0.38 ABIE53_000295 general secretion pathway protein D low > 113
Burkholderia phytofirmans PsJN 0.52 BPHYT_RS28085 Fis family transcriptional regulator 0.19 BPHYT_RS19595 general secretion pathway protein GspD low > 109
Variovorax sp. OAS795 0.47 ABID97_RS15005 sigma-54-dependent Fis family transcriptional regulator 0.35 ABID97_RS06950 type II secretion system secretin GspD low > 91
Acidovorax sp. GW101-3H11 0.34 Ac3H11_4391 Transcriptional activator of acetoin/glycerol metabolism 0.36 Ac3H11_2030 General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD) low > 79
Pseudomonas sp. S08-1 0.29 OH686_03705 sigma-54-dependent transcriptional regulator 0.21 OH686_11840 type II secretion system protein D low > 80
Pseudomonas simiae WCS417 0.29 PS417_16245 Fis family transcriptional regulator 0.31 PS417_11295 general secretion pathway protein GspD low > 88
Pseudomonas fluorescens SBW25-INTG 0.29 PFLU_RS18275 sigma-54-dependent Fis family transcriptional regulator 0.32 PFLU_RS11890 type II secretion system secretin GspD low > 109
Pseudomonas fluorescens SBW25 0.29 PFLU_RS18275 sigma-54-dependent Fis family transcriptional regulator 0.32 PFLU_RS11890 type II secretion system secretin GspD low > 109
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_2611 sigma-54 dependent transcriptional regulator 0.16 PfGW456L13_266 General secretion pathway protein D low > 87
Pseudomonas sp. RS175 0.28 PFR28_02793 Acetoin catabolism regulatory protein 0.30 PFR28_01750 Secretin XcpQ low > 88
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_19490 Fis family transcriptional regulator 0.18 AO353_12545 type II secretion system protein GspD low > 101
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_21605 Fis family transcriptional regulator 0.31 AO356_24790 type II secretion system protein GspD low > 104
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_102 sigma-54 dependent transcriptional regulator 0.32 Pf6N2E2_651 General secretion pathway protein D low > 103
Xanthomonas campestris pv. campestris strain 8004 0.27 Xcc-8004.877.1 hypothetical protein 0.18 Xcc-8004.942.1 hypothetical protein low > 74
Variovorax sp. SCN45 0.27 GFF6444 no description 0.35 GFF5235 General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD) low > 127
Pseudomonas syringae pv. syringae B728a ΔmexB 0.27 Psyr_1736 Helix-turn-helix, Fis-type 0.08 Psyr_3141 type II and III secretion system protein:NolW-like protein low > 86
Pseudomonas syringae pv. syringae B728a 0.27 Psyr_1736 Helix-turn-helix, Fis-type 0.08 Psyr_3141 type II and III secretion system protein:NolW-like protein low > 86
Pseudomonas stutzeri RCH2 0.27 Psest_2888 Transcriptional activator of acetoin/glycerol metabolism 0.19 Psest_2577 general secretion pathway protein D low > 67
Shewanella oneidensis MR-1 0.26 SO4479 sigma-54 dependent transcriptional regulator (NCBI ptt file) 0.16 SO0166 gspD general secretion pathway protein D (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.26 CSW01_09115 sigma-54-dependent Fis family transcriptional regulator 0.16 CSW01_13790 type II secretion system protein GspD — —
Klebsiella michiganensis M5al 0.25 BWI76_RS21990 ATPase AAA 0.15 BWI76_RS05090 type II secretion system protein GspD low > 92
Marinobacter adhaerens HP15 0.25 HP15_2165 sigma-54 dependent transcriptional regulator 0.13 HP15_2355 type II and III secretion system protein low > 73
Ralstonia solanacearum PSI07 0.25 RPSI07_RS09460 sigma-54-dependent Fis family transcriptional regulator 0.79 RPSI07_RS09520 type II secretion system protein GspD low > 81
Shewanella loihica PV-4 0.25 Shew_3573 Fis family GAF modulated sigma54 specific transcriptional regulator (RefSeq) 0.17 Shew_3619 general secretion pathway protein D (RefSeq) low > 60
Ralstonia solanacearum IBSBF1503 0.24 RALBFv3_RS07820 sigma-54-dependent Fis family transcriptional regulator 0.79 RALBFv3_RS07740 type II secretion system protein GspD low > 76
Ralstonia solanacearum GMI1000 0.24 RS_RS15720 sigma-54-dependent Fis family transcriptional regulator 0.80 RS_RS15640 type II secretion system protein GspD low > 80
Shewanella amazonensis SB2B 0.23 Sama_3434 sigma-54 dependent transcriptional regulator (RefSeq) 0.17 Sama_0169 type II and III secretion system protein (RefSeq) low > 62

Not shown: 13 genomes with orthologs for ABZR87_RS15930 only; 31 genomes with orthologs for ABZR87_RS03450 only