Conservation of cofitness between Shewana3_3019 and Shewana3_3905 in Shewanella sp. ANA-3

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella sp. ANA-3 1.0 Shewana3_3019 cytochrome c assembly protein (RefSeq) 1.0 Shewana3_3905 argC N-acetyl-gamma-glutamyl-phosphate reductase (RefSeq) 0.62 6
Shewanella oneidensis MR-1 0.99 SO1355 membrane protein, putative (NCBI ptt file) 0.99 SO0275 argC N-acetyl-gamma-glutamyl-phosphate reductase (NCBI ptt file) 0.41 62
Shewanella amazonensis SB2B 0.85 Sama_0887 hypothetical protein (RefSeq) 0.87 Sama_0256 argC N-acetyl-gamma-glutamyl-phosphate reductase (RefSeq) low > 62
Shewanella loihica PV-4 0.84 Shew_1061 cytochrome c assembly protein (RefSeq) 0.84 Shew_0202 argC N-acetyl-gamma-glutamyl-phosphate reductase (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.37 CSW01_02985 inner membrane protein YpjD 0.53 CSW01_13380 N-acetyl-gamma-glutamyl-phosphate reductase low > 62
Pantoea sp. MT58 0.37 IAI47_04365 inner membrane protein YpjD 0.45 IAI47_00905 N-acetyl-gamma-glutamyl-phosphate reductase low > 76
Serratia liquefaciens MT49 0.37 IAI46_03910 inner membrane protein YpjD 0.48 IAI46_24515 N-acetyl-gamma-glutamyl-phosphate reductase low > 86
Rahnella sp. WP5 0.36 EX31_RS07735 inner membrane protein YpjD 0.47 EX31_RS14190 N-acetyl-gamma-glutamyl-phosphate reductase low > 89
Escherichia coli ECRC99 0.36 KEDOAH_07055 ypjD Inner membrane protein YpjD 0.45 KEDOAH_14575 argC N-acetyl-gamma-glutamyl-phosphate reductase — —
Escherichia coli ECRC101 0.36 OKFHMN_21165 ypjD Inner membrane protein YpjD 0.45 OKFHMN_13585 argC N-acetyl-gamma-glutamyl-phosphate reductase — —
Escherichia coli ECOR27 0.36 NOLOHH_12840 ypjD Inner membrane protein YpjD 0.45 NOLOHH_05730 argC N-acetyl-gamma-glutamyl-phosphate reductase low > 57
Escherichia coli ECRC101 0.36 MCAODC_11695 ypjD Inner membrane protein YpjD 0.45 MCAODC_04085 argC N-acetyl-gamma-glutamyl-phosphate reductase — —
Escherichia coli ECRC98 0.36 JDDGAC_24830 ypjD Inner membrane protein YpjD 0.45 JDDGAC_17210 argC N-acetyl-gamma-glutamyl-phosphate reductase — —
Escherichia coli BW25113 0.36 b2611 ypjD predicted inner membrane protein (RefSeq) 0.45 b3958 argC N-acetyl-gamma-glutamyl-phosphate reductase (NCBI) low > 76
Escherichia coli ECRC62 0.36 BNILDI_11645 ypjD Inner membrane protein YpjD 0.45 BNILDI_05795 argC N-acetyl-gamma-glutamyl-phosphate reductase — —
Escherichia coli Nissle 1917 0.36 ECOLIN_RS14755 inner membrane protein YpjD 0.46 ECOLIN_RS22845 N-acetyl-gamma-glutamyl-phosphate reductase low > 52
Escherichia coli HS(pFamp)R (ATCC 700891) 0.36 OHPLBJKB_01095 Inner membrane protein YpjD 0.45 OHPLBJKB_04092 N-acetyl-gamma-glutamyl-phosphate reductase low > 73
Klebsiella michiganensis M5al 0.36 BWI76_RS21535 inner membrane protein YpjD 0.47 BWI76_RS00845 N-acetyl-gamma-glutamyl-phosphate reductase low > 92
Escherichia coli ECRC102 0.36 NIAGMN_18935 ypjD Inner membrane protein YpjD 0.45 NIAGMN_11335 argC N-acetyl-gamma-glutamyl-phosphate reductase — —
Escherichia coli ECOR38 0.36 HEPCGN_20285 ypjD Inner membrane protein YpjD 0.45 HEPCGN_12230 argC N-acetyl-gamma-glutamyl-phosphate reductase low > 85
Escherichia coli BL21 0.36 ECD_02500 cytochrome c assembly protein family inner membrane protein 0.45 ECD_03843 N-acetyl-gamma-glutamylphosphate reductase, NAD(P)-binding low > 60
Escherichia fergusonii Becca 0.36 EFB2_01281 Inner membrane protein YpjD 0.46 EFB2_04656 N-acetyl-gamma-glutamyl-phosphate reductase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.35 GFF4167 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) 0.47 GFF2344 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) low > 78
Enterobacter sp. TBS_079 0.34 MPMX20_03481 Inner membrane protein YpjD 0.45 MPMX20_04522 N-acetyl-gamma-glutamyl-phosphate reductase low > 85
Enterobacter asburiae PDN3 0.34 EX28DRAFT_2714 ABC-type uncharacterized transport system, permease component 0.47 EX28DRAFT_4420 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) low > 76
Pectobacterium carotovorum WPP14 0.34 HER17_RS05105 inner membrane protein YpjD 0.49 HER17_RS20630 N-acetyl-gamma-glutamyl-phosphate reductase low > 75
Alteromonas macleodii MIT1002 0.34 MIT1002_01295 Inner membrane protein YpjD 0.51 MIT1002_00471 N-acetyl-gamma-glutamyl-phosphate reductase low > 70
Erwinia tracheiphila SCR3 0.33 LU632_RS15675 inner membrane protein YpjD 0.46 LU632_RS19615 argC N-acetyl-gamma-glutamyl-phosphate reductase low > 74
Dickeya dianthicola ME23 0.32 DZA65_RS17390 inner membrane protein YpjD 0.48 DZA65_RS00935 N-acetyl-gamma-glutamyl-phosphate reductase 0.48 64
Dickeya dianthicola 67-19 0.32 HGI48_RS16295 inner membrane protein YpjD 0.48 HGI48_RS00875 N-acetyl-gamma-glutamyl-phosphate reductase 0.62 25
Dickeya dadantii 3937 0.32 DDA3937_RS16185 inner membrane protein YpjD 0.48 DDA3937_RS20350 N-acetyl-gamma-glutamyl-phosphate reductase low > 74
Pseudomonas putida KT2440 0.21 PP_1460 putative Membrane protein 0.27 PP_0432 N-acetyl-gamma-glutamyl-phosphate reductase 1 low > 96
Pseudomonas fluorescens FW300-N2E3 0.21 AO353_04395 cytochrome C assembly protein 0.26 AO353_07155 N-acetyl-gamma-glutamyl-phosphate reductase — —
Marinobacter adhaerens HP15 0.21 HP15_756 cytochrome c assembly protein 0.27 HP15_352 N-acetyl-gamma-glutamyl-phosphate reductase low > 73
Pseudomonas sp. RS175 0.21 PFR28_00325 Inner membrane protein YpjD 0.26 PFR28_04033 N-acetyl-gamma-glutamyl-phosphate reductase low > 88
Pseudomonas stutzeri RCH2 0.20 Psest_3135 ABC-type uncharacterized transport system, permease component 0.26 Psest_3639 N-acetyl-gamma-glutamyl-phosphate reductase, common form — —
Pseudomonas sp. S08-1 0.20 OH686_17715 Inner membrane protein YpjD 0.27 OH686_15195 N-acetyl-gamma-glutamyl-phosphate reductase 0.50 75
Acinetobacter radioresistens SK82 0.20 MPMX26_02469 Inner membrane protein YpjD 0.27 MPMX26_01281 N-acetyl-gamma-glutamyl-phosphate reductase low > 36
Pseudomonas fluorescens SBW25-INTG 0.20 PFLU_RS24590 cytochrome c assembly protein 0.25 PFLU_RS27315 N-acetyl-gamma-glutamyl-phosphate reductase — —
Pseudomonas fluorescens SBW25 0.20 PFLU_RS24590 cytochrome c assembly protein 0.25 PFLU_RS27315 N-acetyl-gamma-glutamyl-phosphate reductase — —
Pseudomonas fluorescens GW456-L13 0.20 PfGW456L13_1714 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) 0.26 PfGW456L13_1233 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) low > 87
Pseudomonas simiae WCS417 0.20 PS417_22930 cytochrome C assembly protein 0.26 PS417_25660 N-acetyl-gamma-glutamyl-phosphate reductase — —
Pseudomonas fluorescens FW300-N2E2 0.19 Pf6N2E2_3151 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) 0.26 Pf6N2E2_4836 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) low > 103
Pseudomonas fluorescens FW300-N2C3 0.19 AO356_06415 cytochrome C assembly protein 0.26 AO356_14490 N-acetyl-gamma-glutamyl-phosphate reductase low > 104
Pseudomonas fluorescens FW300-N1B4 0.18 Pf1N1B4_875 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) 0.26 Pf1N1B4_2559 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.17 Psyr_1280 Cytochrome c assembly protein 0.24 Psyr_4569 N-acetyl-gamma-glutamyl-phosphate reductase — —
Pseudomonas syringae pv. syringae B728a 0.17 Psyr_1280 Cytochrome c assembly protein 0.24 Psyr_4569 N-acetyl-gamma-glutamyl-phosphate reductase — —
Kangiella aquimarina DSM 16071 0.16 B158DRAFT_2259 ABC-type uncharacterized transport system, permease component 0.17 B158DRAFT_1979 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) low > 40
Herbaspirillum seropedicae SmR1 0.16 HSERO_RS01870 ABC transporter permease 0.25 HSERO_RS19210 N-acetyl-gamma-glutamyl-phosphate reductase low > 78
Variovorax sp. OAS795 0.14 ABID97_RS06430 cytochrome c biogenesis protein CcsA 0.12 ABID97_RS02250 N-acetyl-gamma-glutamyl-phosphate reductase — —
Castellaniella sp019104865 MT123 0.13 ABCV34_RS09015 cytochrome c biogenesis protein CcsA 0.26 ABCV34_RS10590 N-acetyl-gamma-glutamyl-phosphate reductase — —
Acidovorax sp. GW101-3H11 0.13 Ac3H11_4016 CcsA-related protein 0.12 Ac3H11_1253 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) 0.47 20
Variovorax sp. SCN45 0.13 GFF4429 Inner membrane protein YpjD 0.14 GFF4146 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) low > 127

Not shown: 2 genomes with orthologs for Shewana3_3019 only; 45 genomes with orthologs for Shewana3_3905 only