Conservation of cofitness between Shewana3_1206 and Shewana3_1746 in Shewanella sp. ANA-3

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella sp. ANA-3 1.0 Shewana3_1206 MscS mechanosensitive ion channel (RefSeq) 1.0 Shewana3_1746 hypothetical protein (RefSeq) 0.64 15
Shewanella oneidensis MR-1 0.97 SO3340 hypothetical Small-conductance mechanosensitive channel (NCBI ptt file) 0.96 SO2634 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.85 Sama_2465 putative small-conductance mechanosensitive channel (RefSeq) 0.80 Sama_2063 hypothetical protein (RefSeq) — —
Shewanella loihica PV-4 0.80 Shew_1152 MscS mechanosensitive ion channel (RefSeq) 0.81 Shew_1559 hypothetical protein (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.54 CSW01_02550 mechanosensitive ion channel protein 0.48 CSW01_05720 lysogenization protein HflD — —
Serratia liquefaciens MT49 0.48 IAI46_20995 small-conductance mechanosensitive channel MscS 0.38 IAI46_10435 high frequency lysogenization protein HflD low > 86
Alteromonas macleodii MIT1002 0.48 MIT1002_03053 Small-conductance mechanosensitive channel 0.50 MIT1002_01827 High frequency lysogenization protein HflD — —
Escherichia coli Nissle 1917 0.46 ECOLIN_RS16250 small-conductance mechanosensitive channel MscS 0.39 ECOLIN_RS06620 high frequency lysogenization protein HflD — —
Escherichia fergusonii Becca 0.46 EFB2_00982 Small-conductance mechanosensitive channel 0.39 EFB2_02843 High frequency lysogenization protein HflD low > 86
Escherichia coli ECRC101 0.46 MCAODC_09925 mscS small-conductance mechanosensitive channel MscS 0.39 MCAODC_22345 hflD high frequency lysogenization protein HflD — —
Escherichia coli ECRC99 0.46 KEDOAH_08735 mscS small-conductance mechanosensitive channel MscS 0.39 KEDOAH_24825 hflD high frequency lysogenization protein HflD — —
Escherichia coli ECOR27 0.46 NOLOHH_11315 mscS small-conductance mechanosensitive channel MscS 0.39 NOLOHH_20905 hflD high frequency lysogenization protein HflD low > 75
Escherichia coli BW25113 0.46 b2924 mscS mechanosensitive channel (NCBI) 0.39 b1132 hflD hypothetical protein (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_00792 Small-conductance mechanosensitive channel 0.39 OHPLBJKB_02536 High frequency lysogenization protein HflD low > 73
Escherichia coli ECOR38 0.46 HEPCGN_18710 mscS small-conductance mechanosensitive channel MscS 0.39 HEPCGN_24215 hflD high frequency lysogenization protein HflD low > 87
Escherichia coli ECRC100 0.46 OKFHMN_19405 mscS small-conductance mechanosensitive channel MscS 0.39 OKFHMN_00740 hflD high frequency lysogenization protein HflD — —
Escherichia coli ECRC98 0.46 JDDGAC_23035 mscS small-conductance mechanosensitive channel MscS 0.39 JDDGAC_06625 hflD high frequency lysogenization protein HflD low > 86
Escherichia coli ECRC62 0.46 BNILDI_09850 mscS small-conductance mechanosensitive channel MscS 0.39 BNILDI_19070 hflD high frequency lysogenization protein HflD low > 75
Escherichia coli ECRC102 0.46 NIAGMN_17170 mscS small-conductance mechanosensitive channel MscS 0.39 NIAGMN_24885 hflD high frequency lysogenization protein HflD — —
Escherichia coli BL21 0.46 ECD_02755 mechanosensitive channel protein, small conductance 0.39 ECD_01130 putative lysogenization regulator low > 61
Rahnella sp. WP5 0.46 EX31_RS21435 small-conductance mechanosensitive channel MscS 0.39 EX31_RS24570 high frequency lysogenization protein HflD low > 89
Klebsiella michiganensis M5al 0.46 BWI76_RS23970 mechanosensitive ion channel protein MscS 0.40 BWI76_RS11310 lysogenization protein HflD — —
Erwinia tracheiphila SCR3 0.44 LU632_RS05550 mscS small-conductance mechanosensitive channel MscS 0.36 LU632_RS14580 hflD high frequency lysogenization protein HflD — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF3019 Protein involved in stability of MscS mechanosensitive channel 0.38 GFF3417 FIG002903: a protein of unknown function perhaps involved in purine metabolism low > 78
Pectobacterium carotovorum WPP14 0.43 HER17_RS02700 small-conductance mechanosensitive channel MscS 0.37 HER17_RS11630 high frequency lysogenization protein HflD 0.58 4
Dickeya dadantii 3937 0.43 DDA3937_RS18505 small-conductance mechanosensitive channel MscS 0.35 DDA3937_RS11490 high frequency lysogenization protein HflD low > 74
Pantoea sp. MT58 0.42 IAI47_03700 small-conductance mechanosensitive channel MscS 0.38 IAI47_11920 high frequency lysogenization protein HflD low > 76
Dickeya dianthicola ME23 0.42 DZA65_RS19565 small-conductance mechanosensitive channel MscS 0.35 DZA65_RS11870 high frequency lysogenization protein HflD low > 75
Enterobacter asburiae PDN3 0.42 EX28DRAFT_2970 Small-conductance mechanosensitive channel 0.37 EX28DRAFT_1798 Uncharacterized protein involved in purine metabolism — —
Dickeya dianthicola 67-19 0.42 HGI48_RS18430 small-conductance mechanosensitive channel MscS 0.35 HGI48_RS11535 high frequency lysogenization protein HflD low > 71
Enterobacter sp. TBS_079 0.42 MPMX20_03776 Small-conductance mechanosensitive channel 0.38 MPMX20_01816 High frequency lysogenization protein HflD low > 85
Pseudomonas stutzeri RCH2 0.42 Psest_1143 Small-conductance mechanosensitive channel 0.31 Psest_2020 Uncharacterized protein involved in purine metabolism low > 67
Kangiella aquimarina DSM 16071 0.42 B158DRAFT_2270 Small-conductance mechanosensitive channel 0.37 B158DRAFT_1840 Uncharacterized protein involved in purine metabolism low > 40
Pseudomonas sp. RS175 0.40 PFR28_03424 Small-conductance mechanosensitive channel 0.29 PFR28_02620 High frequency lysogenization protein HflD low > 88
Marinobacter adhaerens HP15 0.39 HP15_3381 MscS mechanosensitive ion channel 0.38 HP15_2087 protein belonging to uncharacterized protein family UPF0274 low > 73
Pseudomonas simiae WCS417 0.39 PS417_22505 mechanosensitive ion channel protein MscS 0.29 PS417_16545 DNA repair protein — —
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS24145 mechanosensitive ion channel 0.29 PFLU_RS18585 high frequency lysogenization protein HflD low > 109
Pseudomonas fluorescens SBW25 0.37 PFLU_RS24145 mechanosensitive ion channel 0.29 PFLU_RS18585 high frequency lysogenization protein HflD low > 109
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_17965 mechanosensitive ion channel protein MscS 0.30 AO356_22105 DNA repair protein — —
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_649 Small-conductance mechanosensitive channel 0.30 Pf1N1B4_4047 FIG002903: a protein of unknown function perhaps involved in purine metabolism low > 87
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_5523 Small-conductance mechanosensitive channel 0.30 Pf6N2E2_285 FIG002903: a protein of unknown function perhaps involved in purine metabolism low > 103
Dyella japonica UNC79MFTsu3.2 0.35 ABZR86_RS12290 mechanosensitive ion channel domain-containing protein 0.28 ABZR86_RS02180 high frequency lysogenization protein HflD low > 74
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_03635 mechanosensitive ion channel protein MscS 0.29 AO353_27710 DNA repair protein low > 101
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_1841 Small-conductance mechanosensitive channel 0.30 PfGW456L13_2638 FIG002903: a protein of unknown function perhaps involved in purine metabolism low > 87
Pseudomonas putida KT2440 0.31 PP_1353 conserved membrane protein of unknown function 0.30 PP_4015 HflD-like high frequency lysogenization protein low > 96
Rhodanobacter sp. FW510-T8 0.31 OKGIIK_12610 Small-conductance mechanosensitive channel 0.32 OKGIIK_06870 hflD high frequency lysogenization protein HflD low > 52
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_4086 MscS Mechanosensitive ion channel 0.31 Psyr_3191 Protein of unknown function DUF489 low > 86
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_4086 MscS Mechanosensitive ion channel 0.31 Psyr_3191 Protein of unknown function DUF489 low > 86
Rhodanobacter denitrificans FW104-10B01 0.30 LRK54_RS11275 mechanosensitive ion channel 0.31 LRK54_RS00440 high frequency lysogenization protein HflD low > 59
Rhodanobacter denitrificans MT42 0.29 LRK55_RS10980 mechanosensitive ion channel 0.31 LRK55_RS00180 high frequency lysogenization protein HflD low > 63
Pseudomonas sp. S08-1 0.28 OH686_08205 Small-conductance mechanosensitive channel 0.31 OH686_00205 High frequency lysogenization protein HflD low > 80

Not shown: 28 genomes with orthologs for Shewana3_1206 only; 2 genomes with orthologs for Shewana3_1746 only