Conservation of cofitness between Sama_0886 and Sama_2115 in Shewanella amazonensis SB2B

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_0886 hypothetical protein (RefSeq) 1.0 Sama_2115 hypothetical protein (RefSeq) 0.34 14
Shewanella sp. ANA-3 0.81 Shewana3_3020 hypothetical protein (RefSeq) 0.74 Shewana3_2553 aldose 1-epimerase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.81 SO1354 hemolysin protein, putative (NCBI ptt file) 0.74 SO2769 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.80 Shew_1060 hypothetical protein (RefSeq) 0.75 Shew_2165 aldose 1-epimerase (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.66 CSW01_02980 HlyC/CorC family transporter 0.26 CSW01_09980 D-hexose-6-phosphate mutarotase low > 62
Alteromonas macleodii MIT1002 0.65 MIT1002_01294 Hemolysin C 0.18 MIT1002_02402 Putative glucose-6-phosphate 1-epimerase low > 70
Klebsiella michiganensis M5al 0.63 BWI76_RS21540 membrane protein 0.25 BWI76_RS11500 D-hexose-6-phosphate mutarotase low > 92
Pantoea sp. MT58 0.62 IAI47_04360 HlyC/CorC family transporter 0.25 IAI47_08940 D-hexose-6-phosphate mutarotase low > 76
Enterobacter asburiae PDN3 0.61 EX28DRAFT_2715 Putative Mg2+ and Co2+ transporter CorB 0.24 EX28DRAFT_1774 Uncharacterized enzymes related to aldose 1-epimerase low > 76
Enterobacter sp. TBS_079 0.61 MPMX20_03482 hypothetical protein 0.24 MPMX20_01843 Putative glucose-6-phosphate 1-epimerase low > 85
Escherichia coli ECRC62 0.61 BNILDI_11640 yfjD UPF0053 inner membrane protein YfjD 0.25 BNILDI_16040 yeaD Putative glucose-6-phosphate 1-epimerase low > 75
Escherichia fergusonii Becca 0.61 EFB2_01280 hypothetical protein 0.23 EFB2_02214 Putative glucose-6-phosphate 1-epimerase low > 86
Escherichia coli ECOR38 0.61 HEPCGN_20280 yfjD UPF0053 inner membrane protein YfjD 0.23 HEPCGN_05115 yeaD Putative glucose-6-phosphate 1-epimerase low > 87
Rahnella sp. WP5 0.61 EX31_RS07740 HlyC/CorC family transporter 0.25 EX31_RS06275 D-hexose-6-phosphate mutarotase low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF4166 Hemolysins and related proteins containing CBS domains 0.23 GFF3477 Aldose 1-epimerase family protein YeaD low > 78
Escherichia coli ECOR27 0.61 NOLOHH_12835 yfjD UPF0053 inner membrane protein YfjD 0.24 NOLOHH_17255 yeaD Putative glucose-6-phosphate 1-epimerase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.61 OHPLBJKB_01094 hypothetical protein 0.25 OHPLBJKB_01952 Putative glucose-6-phosphate 1-epimerase low > 73
Escherichia coli ECRC98 0.61 JDDGAC_24825 yfjD UPF0053 inner membrane protein YfjD 0.23 JDDGAC_01300 yeaD Putative glucose-6-phosphate 1-epimerase low > 86
Escherichia coli ECRC100 0.61 OKFHMN_21160 yfjD UPF0053 inner membrane protein YfjD 0.23 OKFHMN_26725 yeaD Putative glucose-6-phosphate 1-epimerase low > 80
Escherichia coli ECRC99 0.61 KEDOAH_07060 yfjD UPF0053 inner membrane protein YfjD 0.23 KEDOAH_01385 yeaD Putative glucose-6-phosphate 1-epimerase — —
Escherichia coli ECRC102 0.60 NIAGMN_18930 yfjD UPF0053 inner membrane protein YfjD 0.23 NIAGMN_01340 yeaD Putative glucose-6-phosphate 1-epimerase — —
Escherichia coli Nissle 1917 0.60 ECOLIN_RS14760 HlyC/CorC family transporter 0.23 ECOLIN_RS09925 D-hexose-6-phosphate mutarotase — —
Escherichia coli BW25113 0.60 b4461 yfjD predicted inner membrane protein (RefSeq) 0.25 b1780 yeaD orf, hypothetical protein (VIMSS) low > 76
Serratia liquefaciens MT49 0.60 IAI46_03905 HlyC/CorC family transporter 0.24 IAI46_14360 D-hexose-6-phosphate mutarotase low > 86
Escherichia coli BL21 0.58 ECD_02501 UPF0053 family inner membrane protein 0.24 ECD_01749 D-hexose-6-phosphate epimerase-like protein low > 61
Marinobacter adhaerens HP15 0.57 HP15_755 Mg2+ and Co2+ transporter CorB 0.27 HP15_1887 aldose 1-epimerase family protein low > 73
Pseudomonas stutzeri RCH2 0.52 Psest_3136 Putative Mg2+ and Co2+ transporter CorB 0.32 Psest_0135 Uncharacterized enzymes related to aldose 1-epimerase low > 67
Herbaspirillum seropedicae SmR1 0.39 HSERO_RS01775 hypothetical protein 0.33 HSERO_RS07395 aldose 1-epimerase low > 78
Methylophilus sp. DMC18 0.39 GFF1740 hypothetical protein 0.23 GFF1638 Putative glucose-6-phosphate 1-epimerase low > 43
Pseudomonas aeruginosa PA14 0.35 IKLFDK_19135 magnesium/cobalt efflux protein 0.29 IKLFDK_26315 D-hexose-6-phosphate mutarotase low > 101
Pseudomonas fluorescens FW300-N1B4 0.27 Pf1N1B4_876 Magnesium and cobalt efflux protein CorC 0.30 Pf1N1B4_2031 Aldose 1-epimerase 0.32 70
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_1713 Magnesium and cobalt efflux protein CorC 0.31 PfGW456L13_750 Aldose 1-epimerase low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.27 Psyr_1279 CBS:Transporter-associated region 0.28 Psyr_5044 Aldose 1-epimerase low > 86
Pseudomonas syringae pv. syringae B728a 0.27 Psyr_1279 CBS:Transporter-associated region 0.28 Psyr_5044 Aldose 1-epimerase low > 86
Pseudomonas fluorescens FW300-N2C3 0.26 AO356_06420 transporter 0.30 AO356_11060 aldose epimerase low > 104
Pseudomonas sp. SVBP6 0.26 COO64_RS04865 transporter associated domain-containing protein 0.31 COO64_RS01730 D-hexose-6-phosphate mutarotase low > 93
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_04400 transporter 0.29 AO353_09920 aldose epimerase low > 101
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_3152 Magnesium and cobalt efflux protein CorC 0.29 Pf6N2E2_4078 Aldose 1-epimerase low > 103
Pseudomonas putida KT2440 0.26 PP_1459 CBS domain protein 0.33 PP_5332 conserved protein of unknown function low > 96
Pseudomonas sp. DMC3 0.25 GFF1979 hypothetical protein 0.30 GFF482 Putative glucose-6-phosphate 1-epimerase low > 89
Pseudomonas sp. BP01 0.25 JOY50_RS11660 transporter associated domain-containing protein 0.32 JOY50_RS08840 D-hexose-6-phosphate mutarotase low > 84
Pseudomonas simiae WCS417 0.25 PS417_22935 hypothetical protein 0.28 PS417_28100 glucose-6-phosphate 1-epimerase [EC: 5.1.3.15] (from data) low > 88
Pseudomonas sp. RS175 0.25 PFR28_00324 hypothetical protein 0.29 PFR28_04492 Putative glucose-6-phosphate 1-epimerase low > 88
Pseudomonas fluorescens SBW25-INTG 0.24 PFLU_RS24595 DUF21 domain-containing protein 0.27 PFLU_RS29785 D-hexose-6-phosphate mutarotase low > 109
Pseudomonas fluorescens SBW25 0.24 PFLU_RS24595 DUF21 domain-containing protein 0.27 PFLU_RS29785 D-hexose-6-phosphate mutarotase low > 109

Not shown: 28 genomes with orthologs for Sama_0886 only; 12 genomes with orthologs for Sama_2115 only