Conservation of cofitness between Sama_2221 and Sama_0811 in Shewanella amazonensis SB2B

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_2221 phhB pterin-4-alpha-carbinolamine dehydratase (RefSeq) 1.0 Sama_0811 deoxyribodipyrimidine photo-lyase (RefSeq) 0.28 5
Shewanella loihica PV-4 0.95 Shew_1436 phhB pterin-4-alpha-carbinolamine dehydratase (RefSeq) 0.43 Shew_1479 deoxyribodipyrimidine photo-lyase (RefSeq) low > 60
Shewanella sp. ANA-3 0.94 Shewana3_2780 phhB pterin-4-alpha-carbinolamine dehydratase (RefSeq) 0.56 Shewana3_1166 deoxyribodipyrimidine photo-lyase type I (RefSeq) low > 73
Shewanella oneidensis MR-1 0.93 SO1667 pterin-4-alpha-carbinolamine dehydratase (NCBI ptt file) 0.57 SO3384 phrB deoxyribodipyrimidine photolyase (NCBI ptt file) low > 76
Pseudomonas putida KT2440 0.75 PP_4491 pterin-4-alpha-carbinolamine dehydratase 0.38 PP_0739 deoxyribodipyrimidine photolyase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_3576 pterin-4-alpha-carbinolamine dehydratase 0.37 Psyr_0961 deoxyribodipyrimidine photo-lyase type I — —
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_3576 pterin-4-alpha-carbinolamine dehydratase 0.37 Psyr_0961 deoxyribodipyrimidine photo-lyase type I — —
Pseudomonas fluorescens SBW25-INTG 0.74 PFLU_RS21875 4a-hydroxytetrahydrobiopterin dehydratase 0.36 PFLU_RS03715 deoxyribodipyrimidine photo-lyase — —
Pseudomonas simiae WCS417 0.74 PS417_19905 pterin-4-alpha-carbinolamine dehydratase 0.37 PS417_03665 deoxyribodipyrimidine photolyase — —
Pseudomonas fluorescens FW300-N2E3 0.74 AO353_18580 pterin-4-alpha-carbinolamine dehydratase 0.36 AO353_14820 deoxyribodipyrimidine photolyase — —
Pseudomonas fluorescens SBW25 0.74 PFLU_RS21875 4a-hydroxytetrahydrobiopterin dehydratase 0.36 PFLU_RS03715 deoxyribodipyrimidine photo-lyase — —
Pseudomonas fluorescens FW300-N2E2 0.73 Pf6N2E2_2631 Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96) 0.37 Pf6N2E2_5228 Deoxyribodipyrimidine photolyase (EC 4.1.99.3) — —
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_03980 pterin-4-alpha-carbinolamine dehydratase 0.36 AO356_16530 deoxyribodipyrimidine photolyase — —
Pseudomonas sp. RS175 0.73 PFR28_00801 Putative pterin-4-alpha-carbinolamine dehydratase 0.37 PFR28_03648 Deoxyribodipyrimidine photo-lyase — —
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_4395 Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96) 0.36 PfGW456L13_1589 Deoxyribodipyrimidine photolyase (EC 4.1.99.3) — —
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_3565 Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96) 0.36 Pf1N1B4_2927 Deoxyribodipyrimidine photolyase (EC 4.1.99.3) — —
Pseudomonas stutzeri RCH2 0.71 Psest_0780 Pterin-4a-carbinolamine dehydratase 0.37 Psest_2397 Deoxyribodipyrimidine photolyase — —
Pseudomonas sp. S08-1 0.68 OH686_21230 Pterin-4-alpha-carbinolamine dehydratase 0.39 OH686_07850 Deoxyribodipyrimidine photolyase — —
Vibrio cholerae E7946 ATCC 55056 0.60 CSW01_18285 4a-hydroxytetrahydrobiopterin dehydratase 0.40 CSW01_14320 deoxyribodipyrimidine photo-lyase low > 62
Marinobacter adhaerens HP15 0.55 HP15_1336 pterin-4-alpha-carbinolamine dehydratase 0.41 HP15_715 deoxyribodipyrimidine photolyase low > 73
Rhodanobacter denitrificans MT42 0.34 LRK55_RS17755 4a-hydroxytetrahydrobiopterin dehydratase 0.28 LRK55_RS07250 deoxyribodipyrimidine photo-lyase — —
Rhodanobacter denitrificans FW104-10B01 0.34 LRK54_RS17900 4a-hydroxytetrahydrobiopterin dehydratase 0.28 LRK54_RS07510 DNA photolyase family protein low > 59
Xanthomonas campestris pv. campestris strain 8004 0.32 Xcc-8004.2619.1 Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96) 0.24 Xcc-8004.3484.1 Deoxyribodipyrimidine photolyase (EC 4.1.99.3) low > 74
Dechlorosoma suillum PS 0.32 Dsui_3224 pterin-4a-carbinolamine dehydratase 0.28 Dsui_0591 deoxyribodipyrimidine photolyase low > 51
Rhodanobacter sp. FW510-T8 0.29 OKGIIK_07400 4a-hydroxytetrahydrobiopterin dehydratase 0.27 OKGIIK_13930 Deoxyribodipyrimidine photolyase low > 52
Lysobacter sp. OAE881 0.29 ABIE51_RS11790 4a-hydroxytetrahydrobiopterin dehydratase 0.23 ABIE51_RS09260 deoxyribodipyrimidine photo-lyase low > 62
Dyella japonica UNC79MFTsu3.2 0.27 ABZR86_RS02735 4a-hydroxytetrahydrobiopterin dehydratase 0.29 ABZR86_RS01855 deoxyribodipyrimidine photo-lyase — —
Herbaspirillum seropedicae SmR1 0.26 HSERO_RS07200 pterin-4-alpha-carbinolamine dehydratase 0.30 HSERO_RS09280 deoxyribodipyrimidine photo-lyase — —
Acidovorax sp. GW101-3H11 0.22 Ac3H11_1679 Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96) 0.29 Ac3H11_3983 Deoxyribodipyrimidine photolyase (EC 4.1.99.3) low > 79

Not shown: 4 genomes with orthologs for Sama_2221 only; 56 genomes with orthologs for Sama_0811 only