Conservation of cofitness between BT1336 and BT3361 in Bacteroides thetaiotaomicron VPI-5482

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT1336 putative translation initiation inhibitor (NCBI ptt file) 1.0 BT3361 erythronate-4-phosphate dehydrogenase (NCBI ptt file) 0.69 13
Bacteroides ovatus ATCC 8483 0.96 BACOVA_00589 putative endoribonuclease L-PSP 0.84 BACOVA_01953 4-phosphoerythronate dehydrogenase 0.62 30
Bacteroides stercoris CC31F 0.88 HMPREF1181_RS10885 RidA family protein 0.76 HMPREF1181_RS02440 4-phosphoerythronate dehydrogenase PdxB — —
Phocaeicola vulgatus CL09T03C04 0.71 HMPREF1058_RS18400 RidA family protein 0.62 HMPREF1058_RS10820 4-phosphoerythronate dehydrogenase PdxB 0.65 5
Phocaeicola dorei CL03T12C01 0.70 ABI39_RS14715 RidA family protein 0.62 ABI39_RS06250 4-phosphoerythronate dehydrogenase PdxB low > 72
Parabacteroides merdae CL09T00C40 0.63 HMPREF1078_RS02020 RidA family protein 0.51 HMPREF1078_RS19150 4-phosphoerythronate dehydrogenase PdxB low > 61
Pantoea sp. MT58 0.55 IAI47_16870 2-iminobutanoate/2-iminopropanoate deaminase 0.29 IAI47_06235 4-phosphoerythronate dehydrogenase PdxB low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF928 Endoribonuclease L-PSP 0.34 GFF1936 Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290) 0.69 34
Klebsiella michiganensis M5al 0.54 BWI76_RS02985 reactive intermediate/imine deaminase 0.31 BWI76_RS20390 erythronate-4-phosphate dehydrogenase low > 92
Enterobacter sp. TBS_079 0.54 MPMX20_00542 2-iminobutanoate/2-iminopropanoate deaminase 0.31 MPMX20_03255 Erythronate-4-phosphate dehydrogenase low > 85
Dickeya dianthicola 67-19 0.54 HGI48_RS01890 2-iminobutanoate/2-iminopropanoate deaminase 0.28 HGI48_RS14445 4-phosphoerythronate dehydrogenase PdxB — —
Dickeya dianthicola ME23 0.54 DZA65_RS01960 2-iminobutanoate/2-iminopropanoate deaminase 0.32 DZA65_RS15380 4-phosphoerythronate dehydrogenase PdxB low > 75
Dickeya dadantii 3937 0.53 DDA3937_RS01915 2-iminobutanoate/2-iminopropanoate deaminase 0.33 DDA3937_RS14475 4-phosphoerythronate dehydrogenase PdxB 0.36 56
Enterobacter asburiae PDN3 0.53 EX28DRAFT_3444 reactive intermediate/imine deaminase 0.31 EX28DRAFT_0284 Phosphoglycerate dehydrogenase and related dehydrogenases low > 76
Rahnella sp. WP5 0.53 EX31_RS12775 2-iminobutanoate/2-iminopropanoate deaminase 0.34 EX31_RS19610 4-phosphoerythronate dehydrogenase PdxB low > 89
Escherichia coli ECOR38 0.52 HEPCGN_10070 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.31 HEPCGN_21865 pdxB 4-phosphoerythronate dehydrogenase PdxB low > 85
Escherichia coli BL21 0.52 ECD_04111 enamine/imine deaminase, reaction intermediate detoxification 0.32 ECD_02245 erythronate-4-phosphate dehydrogenase low > 60
Escherichia coli Nissle 1917 0.52 ECOLIN_RS24615 2-iminobutanoate/2-iminopropanoate deaminase 0.32 ECOLIN_RS13445 4-phosphoerythronate dehydrogenase PdxB low > 52
Vibrio cholerae E7946 ATCC 55056 0.52 CSW01_12735 RidA family protein 0.32 CSW01_10525 DUF3410 domain-containing protein — —
Escherichia coli ECOR27 0.52 NOLOHH_04135 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.31 NOLOHH_14295 pdxB 4-phosphoerythronate dehydrogenase PdxB low > 57
Escherichia coli ECRC102 0.52 NIAGMN_09725 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.32 NIAGMN_20435 pdxB 4-phosphoerythronate dehydrogenase PdxB — —
Escherichia coli ECRC101 0.52 OKFHMN_11875 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.32 OKFHMN_22660 pdxB 4-phosphoerythronate dehydrogenase PdxB — —
Escherichia coli BW25113 0.52 b4243 yjgF orf, hypothetical protein (VIMSS) 0.31 b2320 pdxB erythronate-4-phosphate dehydrogenase (NCBI) 0.23 51
Escherichia coli ECRC101 0.52 MCAODC_02380 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.32 MCAODC_13700 pdxB 4-phosphoerythronate dehydrogenase PdxB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_03791 2-iminobutanoate/2-iminopropanoate deaminase 0.32 OHPLBJKB_01385 Erythronate-4-phosphate dehydrogenase low > 73
Escherichia coli ECRC98 0.52 JDDGAC_15515 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.32 JDDGAC_26620 pdxB 4-phosphoerythronate dehydrogenase PdxB — —
Escherichia coli ECRC62 0.52 BNILDI_07375 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.31 BNILDI_13215 pdxB 4-phosphoerythronate dehydrogenase PdxB — —
Escherichia coli ECRC99 0.52 KEDOAH_16280 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.32 KEDOAH_05535 pdxB 4-phosphoerythronate dehydrogenase PdxB — —
Escherichia fergusonii Becca 0.52 EFB2_04290 2-iminobutanoate/2-iminopropanoate deaminase 0.32 EFB2_01538 Erythronate-4-phosphate dehydrogenase low > 86
Erwinia tracheiphila SCR3 0.51 LU632_RS20960 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.30 LU632_RS07815 DUF3410 domain-containing protein — —
Pectobacterium carotovorum WPP14 0.50 HER17_RS19520 2-iminobutanoate/2-iminopropanoate deaminase 0.29 HER17_RS06980 4-phosphoerythronate dehydrogenase PdxB low > 75
Pseudomonas syringae pv. syringae B728a ΔmexB 0.49 Psyr_0208 endoribonuclease L-PSP 0.33 Psyr_1828 4-phosphoerythronate dehydrogenase — —
Pseudomonas syringae pv. syringae B728a 0.49 Psyr_0208 endoribonuclease L-PSP 0.33 Psyr_1828 4-phosphoerythronate dehydrogenase — —
Serratia liquefaciens MT49 0.48 IAI46_02265 2-iminobutanoate/2-iminopropanoate deaminase 0.30 IAI46_17850 4-phosphoerythronate dehydrogenase PdxB low > 86
Pseudomonas fluorescens FW300-N2C3 0.48 AO356_12475 reactive intermediate/imine deaminase 0.29 AO356_02365 erythronate-4-phosphate dehydrogenase — —
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_4360 Bona fide RidA/YjgF/TdcF/RutC subgroup 0.29 Pf6N2E2_2297 Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290) — —
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_09285 reactive intermediate/imine deaminase 0.30 AO353_00545 erythronate-4-phosphate dehydrogenase — —
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_779 Bona fide RidA/YjgF/TdcF/RutC subgroup 0.31 PfGW456L13_4048 Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290) — —
Pseudomonas fluorescens SBW25 0.47 PFLU_RS29515 RidA family protein 0.29 PFLU_RS07615 4-phosphoerythronate dehydrogenase PdxB — —
Pseudomonas sp. RS175 0.47 PFR28_04425 2-iminobutanoate/2-iminopropanoate deaminase 0.29 PFR28_01103 Erythronate-4-phosphate dehydrogenase — —
Pseudomonas putida KT2440 0.47 PP_5303 aminoacrylate/iminopropionate hydrolase/deaminase 0.29 PP_2117 Erythronate-4-phosphate dehydrogenase — —
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_2112 Bona fide RidA/YjgF/TdcF/RutC subgroup 0.31 Pf1N1B4_3893 Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290) — —
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS29515 RidA family protein 0.29 PFLU_RS07615 4-phosphoerythronate dehydrogenase PdxB — —
Pseudomonas simiae WCS417 0.47 PS417_27835 endoribonuclease 0.30 PS417_07535 erythronate-4-phosphate dehydrogenase — —
Pseudomonas sp. S08-1 0.46 OH686_13545 RidA/YER057c/UK114 superfamily protein 0.27 OH686_02070 Erythronate-4-phosphate dehydrogenase — —
Shewanella sp. ANA-3 0.45 Shewana3_2971 putative endoribonuclease L-PSP (RefSeq) 0.30 Shewana3_1476 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region (RefSeq) — —
Shewanella oneidensis MR-1 0.45 SO1404 endoribonuclease L-PSP, putative (NCBI ptt file) 0.30 SO3071 pdxB erythronate-4-phosphate dehydrogenase (NCBI ptt file) — —
Pseudomonas stutzeri RCH2 0.44 Psest_3818 endoribonuclease L-PSP, putative 0.29 Psest_2548 Phosphoglycerate dehydrogenase and related dehydrogenases — —
Alteromonas macleodii MIT1002 0.42 MIT1002_00109 Putative reactive intermediate deaminase TdcF 0.27 MIT1002_02532 Erythronate-4-phosphate dehydrogenase — —
Kangiella aquimarina DSM 16071 0.41 B158DRAFT_0573 endoribonuclease L-PSP, putative 0.33 B158DRAFT_1308 4-phosphoerythronate dehydrogenase (EC 1.1.1.290) — —
Shewanella amazonensis SB2B 0.40 Sama_0263 YjgF-like protein (RefSeq) 0.26 Sama_2153 erythronate-4-phosphate dehydrogenase (RefSeq) — —
Shewanella loihica PV-4 0.40 Shew_3500 putative endoribonuclease L-PSP (RefSeq) 0.28 Shew_2309 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (RefSeq) — —
Acinetobacter radioresistens SK82 0.40 MPMX26_02797 2-iminobutanoate/2-iminopropanoate deaminase 0.29 MPMX26_02238 Erythronate-4-phosphate dehydrogenase low > 36
Marinobacter adhaerens HP15 0.39 HP15_306 YjgF-like protein 0.29 HP15_2098 erythronate-4-phosphate dehydrogenase — —

Not shown: 46 genomes with orthologs for BT1336 only; 0 genomes with orthologs for BT3361 only