Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Escherichia coli BW25113 | 1.0 | b0756 | galM | galactose-1-epimerase (mutarotase) (NCBI) | 1.0 | b3750 | rbsC | ribose ABC transporter permease protein (NCBI) | 0.17 | 19 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_02957 | | Aldose 1-epimerase | 1.00 | OHPLBJKB_04303 | | Ribose import permease protein RbsC | low | > 73 |
Escherichia coli ECRC62 | 1.00 | BNILDI_21155 | galM | galactose-1-epimerase | 1.00 | BNILDI_04650 | rbsC | ribose ABC transporter permease | — | — |
Escherichia coli ECOR27 | 1.00 | NOLOHH_23160 | galM | galactose-1-epimerase | 1.00 | NOLOHH_06875 | rbsC | ribose ABC transporter permease | low | > 57 |
Escherichia coli ECOR38 | 1.00 | HEPCGN_01545 | galM | galactose-1-epimerase | 1.00 | HEPCGN_13450 | rbsC | ribose ABC transporter permease | low | > 85 |
Escherichia coli Nissle 1917 | 0.99 | ECOLIN_RS04025 | | galactose-1-epimerase | 1.00 | ECOLIN_RS21560 | | ribose ABC transporter permease | low | > 52 |
Escherichia fergusonii Becca | 0.99 | EFB2_03350 | | Aldose 1-epimerase | 1.00 | EFB2_04883 | | Ribose import permease protein RbsC | low | > 86 |
Escherichia coli ECRC99 | 0.99 | KEDOAH_21235 | galM | galactose-1-epimerase | 1.00 | KEDOAH_13410 | rbsC | ribose ABC transporter permease | — | — |
Escherichia coli ECRC101 | 0.99 | MCAODC_25950 | galM | galactose-1-epimerase | 1.00 | MCAODC_05245 | rbsC | ribose ABC transporter permease | — | — |
Escherichia coli ECRC101 | 0.99 | OKFHMN_06730 | galM | galactose-1-epimerase | 1.00 | OKFHMN_14740 | rbsC | ribose ABC transporter permease | — | — |
Escherichia coli ECRC98 | 0.99 | JDDGAC_10385 | galM | galactose-1-epimerase | 1.00 | JDDGAC_18360 | rbsC | ribose ABC transporter permease | — | — |
Escherichia coli ECRC102 | 0.99 | NIAGMN_04780 | galM | galactose-1-epimerase | 1.00 | NIAGMN_12495 | rbsC | ribose ABC transporter permease | — | — |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.88 | GFF649 | | Aldose 1-epimerase (EC 5.1.3.3) | 0.92 | GFF1707 | | Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) | low | > 78 |
Enterobacter asburiae PDN3 | 0.80 | EX28DRAFT_2239 | | galactose mutarotase | 0.93 | EX28DRAFT_4026 | | Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components | low | > 76 |
Enterobacter sp. TBS_079 | 0.80 | MPMX20_01383 | | Aldose 1-epimerase | 0.93 | MPMX20_04617 | | Ribose import permease protein RbsC | low | > 85 |
Klebsiella michiganensis M5al | 0.77 | BWI76_RS08610 | | galactose-1-epimerase | 0.92 | BWI76_RS00280 | | ribose ABC transporter permease | low | > 92 |
Pantoea sp. MT58 | 0.63 | IAI47_13595 | | galactose-1-epimerase | 0.85 | IAI47_00360 | | ribose ABC transporter permease | low | > 76 |
Dickeya dadantii 3937 | 0.61 | DDA3937_RS06600 | | galactose-1-epimerase | 0.87 | DDA3937_RS00040 | | ribose ABC transporter permease | low | > 74 |
Dickeya dianthicola ME23 | 0.60 | DZA65_RS06975 | | galactose-1-epimerase | 0.87 | DZA65_RS22305 | | ribose ABC transporter permease | low | > 75 |
Serratia liquefaciens MT49 | 0.59 | IAI46_06420 | | galactose-1-epimerase | 0.87 | IAI46_25065 | | ribose ABC transporter permease | low | > 86 |
Rahnella sp. WP5 | 0.59 | EX31_RS23565 | | galactose-1-epimerase | 0.85 | EX31_RS06180 | | ribose ABC transporter permease | low | > 89 |
Dickeya dianthicola 67-19 | 0.59 | HGI48_RS06620 | | galactose-1-epimerase | 0.87 | HGI48_RS21325 | | ribose ABC transporter permease | low | > 71 |
Pectobacterium carotovorum WPP14 | 0.58 | HER17_RS14770 | | galactose-1-epimerase | 0.90 | HER17_RS21540 | | ribose ABC transporter permease | low | > 75 |
Vibrio cholerae E7946 ATCC 55056 | 0.47 | CSW01_07995 | | galactose-1-epimerase | 0.73 | CSW01_14655 | | ribose ABC transporter permease | low | > 62 |
Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.34 | ABZR88_RS04930 | | aldose epimerase family protein | 0.45 | ABZR88_RS15230 | | ABC transporter permease | — | — |
Ralstonia sp. UNC404CL21Col | 0.32 | ABZR87_RS18210 | | aldose epimerase family protein | 0.33 | ABZR87_RS12030 | | ABC transporter permease | low | > 80 |
Paraburkholderia sabiae LMG 24235 | 0.32 | QEN71_RS25885 | | aldose epimerase family protein | 0.39 | QEN71_RS02650 | | ABC transporter permease | low | > 153 |
Pseudomonas fluorescens FW300-N1B4 | 0.32 | Pf1N1B4_84 | | Aldose 1-epimerase (EC 5.1.3.3) | 0.31 | Pf1N1B4_4287 | | Inositol transport system permease protein | low | > 87 |
Echinicola vietnamensis KMM 6221, DSM 17526 | 0.32 | Echvi_0697 | | Aldose 1-epimerase (EC 5.1.3.3) (from data) | 0.44 | Echvi_1280 | | Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components | low | > 79 |
Pseudomonas syringae pv. syringae B728a | 0.32 | Psyr_2369 | | aldose 1-epimerase | 0.37 | Psyr_2570 | | monosaccharide ABC transporter membrane protein, CUT2 family | low | > 86 |
Pseudomonas simiae WCS417 | 0.32 | PS417_11040 | | aldose epimerase | 0.41 | PS417_17725 | | ribose ABC transporter permease | low | > 88 |
Herbaspirillum seropedicae SmR1 | 0.32 | HSERO_RS22450 | | aldose 1-epimerase | 0.41 | HSERO_RS05325 | | ribose ABC transporter permease | low | > 78 |
Paraburkholderia bryophila 376MFSha3.1 | 0.32 | H281DRAFT_03874 | | aldose 1-epimerase (EC 5.1.3.3) | 0.38 | H281DRAFT_04148 | | monosaccharide ABC transporter membrane protein, CUT2 family | low | > 103 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.32 | Psyr_2369 | | aldose 1-epimerase | 0.37 | Psyr_2570 | | monosaccharide ABC transporter membrane protein, CUT2 family | low | > 86 |
Pseudomonas fluorescens SBW25-INTG | 0.32 | PFLU_RS11665 | | galactose mutarotase | 0.41 | PFLU_RS19510 | | sugar ABC transporter permease | low | > 109 |
Pseudomonas fluorescens SBW25 | 0.32 | PFLU_RS11665 | | galactose mutarotase | 0.41 | PFLU_RS19510 | | sugar ABC transporter permease | low | > 109 |
Pseudomonas fluorescens FW300-N2C3 | 0.31 | AO356_01315 | | aldose epimerase | 0.31 | AO356_23210 | | ABC transporter | low | > 104 |
Caulobacter crescentus NA1000 Δfur | 0.31 | CCNA_01485 | | aldose 1-epimerase | 0.29 | CCNA_00904 | | inositol ABC transport system, permease protein IatP | low | > 67 |
Caulobacter crescentus NA1000 | 0.31 | CCNA_01485 | | aldose 1-epimerase | 0.29 | CCNA_00904 | | inositol ABC transport system, permease protein IatP | low | > 66 |
Variovorax sp. OAS795 | 0.31 | ABID97_RS06780 | | aldose epimerase family protein | 0.27 | ABID97_RS00430 | | ABC transporter permease | low | > 91 |
Pseudomonas fluorescens FW300-N2E2 | 0.31 | Pf6N2E2_2135 | | Aldose 1-epimerase (EC 5.1.3.3) | 0.31 | Pf6N2E2_524 | | Inositol transport system permease protein | low | > 103 |
Burkholderia phytofirmans PsJN | 0.30 | BPHYT_RS32835 | | aldose 1-epimerase | 0.40 | BPHYT_RS16055 | | sugar ABC transporter permease | — | — |
Variovorax sp. SCN45 | 0.29 | GFF5187 | | Aldose 1-epimerase (EC 5.1.3.3) | 0.27 | GFF3691 | | ABC transporter, permease protein (cluster 2, ribose/xylose/arabinose/galactose) | low | > 127 |
Azospirillum sp. SherDot2 | 0.27 | MPMX19_06214 | | Aldose 1-epimerase | 0.46 | MPMX19_03759 | | Ribose import permease protein RbsC | low | > 112 |
Rhizobium sp. OAE497 | 0.26 | ABIE40_RS18585 | | aldose epimerase family protein | 0.37 | ABIE40_RS24750 | | ABC transporter permease | low | > 107 |
Agrobacterium fabrum C58 | 0.26 | Atu2719 | | aldose epimerase | 0.39 | Atu4322 | | ribose ABC transporter permease | low | > 89 |
Sinorhizobium meliloti 1021 | 0.26 | SMc03798 | | aldose 1-epimerase | 0.37 | SM_b21375 | | sugar uptake ABC transporter permease | low | > 103 |
Azospirillum brasilense Sp245 | 0.22 | AZOBR_RS31270 | | aldose 1-epimerase | 0.27 | AZOBR_RS27940 | | ABC transporter permease | low | > 97 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.21 | GFF791 | | Aldose 1-epimerase (EC 5.1.3.3) | 0.27 | GFF198 | | Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) | low | > 90 |
Acidovorax sp. GW101-3H11 | 0.20 | Ac3H11_3951 | | Aldose 1-epimerase (EC 5.1.3.3) | 0.30 | Ac3H11_3036 | | Fructose ABC transporter, permease component FrcC | low | > 79 |
Phaeobacter inhibens DSM 17395 | 0.19 | PGA1_262p00390 | | aldose 1-epimerase | 0.24 | PGA1_c28050 | | putative sugar transport system, permease protein | low | > 62 |
Dinoroseobacter shibae DFL-12 | 0.16 | Dshi_2683 | | Aldose 1-epimerase (RefSeq) | 0.25 | Dshi_0389 | | Monosaccharide-transporting ATPase (RefSeq) | low | > 64 |
Not shown: 20 genomes with orthologs for b0756 only; 10 genomes with orthologs for b3750 only