Conservation of cofitness between b0726 and b3368 in Escherichia coli BW25113

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0726 sucA alpha-ketoglutarate decarboxylase (NCBI) 1.0 b3368 cysG fused siroheme synthase 1,3-dimethyluroporphyriongen III dehydrogenase and siroheme ferrochelatase/uroporphyrinogen methyltransferase (NCBI) 0.69 15
Escherichia coli ECRC62 1.00 BNILDI_21310 sucA 2-oxoglutarate dehydrogenase E1 component 1.00 BNILDI_02540 cysG siroheme synthase CysG — —
Escherichia coli ECRC102 1.00 NIAGMN_04975 sucA 2-oxoglutarate dehydrogenase E1 component 1.00 NIAGMN_14950 cysG siroheme synthase CysG — —
Escherichia coli ECRC101 1.00 MCAODC_26145 sucA 2-oxoglutarate dehydrogenase E1 component 1.00 MCAODC_07710 cysG siroheme synthase CysG — —
Escherichia coli ECRC101 1.00 OKFHMN_06925 sucA 2-oxoglutarate dehydrogenase E1 component 1.00 OKFHMN_17180 cysG siroheme synthase CysG — —
Escherichia fergusonii Becca 1.00 EFB2_03380 2-oxoglutarate dehydrogenase E1 component 1.00 EFB2_00454 Siroheme synthase — —
Escherichia coli ECRC99 1.00 KEDOAH_21040 sucA 2-oxoglutarate dehydrogenase E1 component 1.00 KEDOAH_10960 cysG siroheme synthase CysG — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02991 2-oxoglutarate dehydrogenase E1 component 1.00 OHPLBJKB_00334 Siroheme synthase low > 73
Escherichia coli BL21 1.00 ECD_00685 2-oxoglutarate decarboxylase, thiamine triphosphate-binding 1.00 ECD_03219 fused siroheme synthase 1,3-dimethyluroporphyriongen III dehydrogenase and siroheme ferrochelatase/uroporphyrinogen methyltransferase — —
Escherichia coli ECRC98 1.00 JDDGAC_10580 sucA 2-oxoglutarate dehydrogenase E1 component 1.00 JDDGAC_20810 cysG siroheme synthase CysG — —
Escherichia coli ECOR38 1.00 HEPCGN_01305 sucA 2-oxoglutarate dehydrogenase E1 component 1.00 HEPCGN_16010 cysG siroheme synthase CysG low > 85
Escherichia coli ECOR27 1.00 NOLOHH_23315 sucA 2-oxoglutarate dehydrogenase E1 component 1.00 NOLOHH_08980 cysG siroheme synthase CysG — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS03870 2-oxoglutarate dehydrogenase E1 component 1.00 ECOLIN_RS19285 siroheme synthase CysG — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.96 GFF4639 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) 0.92 GFF3700 Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) low > 78
Enterobacter asburiae PDN3 0.95 EX28DRAFT_2266 2-oxoglutarate dehydrogenase, E1 component 0.89 EX28DRAFT_4160 uroporphyrin-III C-methyltransferase — —
Enterobacter sp. TBS_079 0.94 MPMX20_01354 2-oxoglutarate dehydrogenase E1 component 0.89 MPMX20_04271 Siroheme synthase low > 85
Klebsiella michiganensis M5al 0.94 BWI76_RS08415 2-oxoglutarate dehydrogenase subunit E1 0.88 BWI76_RS26055 siroheme synthase — —
Pantoea sp. MT58 0.90 IAI47_13745 2-oxoglutarate dehydrogenase E1 component 0.50 IAI47_04175 uroporphyrinogen-III C-methyltransferase 0.72 7
Serratia liquefaciens MT49 0.90 IAI46_06275 2-oxoglutarate dehydrogenase E1 component 0.71 IAI46_23670 uroporphyrinogen-III C-methyltransferase low > 86
Rahnella sp. WP5 0.89 EX31_RS23440 2-oxoglutarate dehydrogenase E1 component 0.71 EX31_RS04680 uroporphyrinogen-III C-methyltransferase low > 89
Dickeya dadantii 3937 0.89 DDA3937_RS06460 2-oxoglutarate dehydrogenase E1 component 0.51 DDA3937_RS16930 uroporphyrinogen-III C-methyltransferase — —
Dickeya dianthicola ME23 0.89 DZA65_RS06845 2-oxoglutarate dehydrogenase E1 component 0.50 DZA65_RS18075 uroporphyrinogen-III C-methyltransferase — —
Dickeya dianthicola 67-19 0.88 HGI48_RS06500 2-oxoglutarate dehydrogenase E1 component 0.51 HGI48_RS17000 uroporphyrinogen-III C-methyltransferase — —
Erwinia tracheiphila SCR3 0.88 LU632_RS16095 sucA 2-oxoglutarate dehydrogenase E1 component 0.53 LU632_RS06420 cysG siroheme synthase CysG low > 74
Pectobacterium carotovorum WPP14 0.86 HER17_RS14930 2-oxoglutarate dehydrogenase E1 component 0.72 HER17_RS01835 siroheme synthase CysG — —
Alteromonas macleodii MIT1002 0.70 MIT1002_01948 2-oxoglutarate dehydrogenase E1 component 0.45 MIT1002_00665 Siroheme synthase — —
Kangiella aquimarina DSM 16071 0.61 B158DRAFT_1424 2-oxoglutarate dehydrogenase, E1 component 0.49 B158DRAFT_2163 uroporphyrin-III C-methyltransferase — —
Pseudomonas sp. RS175 0.60 PFR28_03096 2-oxoglutarate dehydrogenase E1 component 0.49 PFR28_02603 Siroheme synthase — —
Pseudomonas fluorescens GW456-L13 0.60 PfGW456L13_4269 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) 0.49 PfGW456L13_2656 Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) — —
Pseudomonas fluorescens FW300-N1B4 0.60 Pf1N1B4_3681 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) 0.49 Pf1N1B4_4065 Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) — —
Pseudomonas fluorescens FW300-N2E2 0.60 Pf6N2E2_5855 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) 0.49 Pf6N2E2_302 Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) — —
Pseudomonas sp. S08-1 0.60 OH686_01970 oxoglutarate dehydrogenase (succinyl-transferring), E1 component 0.45 OH686_00285 Precorrin-2 oxidase or Sirohydrochlorin ferrochelatase activity of CysG / Uroporphyrinogen-III methyltransferase — —
Pseudomonas fluorescens FW300-N2C3 0.60 AO356_19695 2-oxoglutarate dehydrogenase subunit E1 0.49 AO356_22200 sirohydrochlorin ferrochelatase — —
Pseudomonas fluorescens FW300-N2E3 0.59 AO353_01835 2-oxoglutarate dehydrogenase subunit E1 0.49 AO353_27625 sirohydrochlorin ferrochelatase — —
Pseudomonas stutzeri RCH2 0.59 Psest_2494 2-oxoglutarate dehydrogenase, E1 component 0.51 Psest_2037 uroporphyrin-III C-methyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.59 Psyr_2009 2-oxoglutarate dehydrogenase E1 component 0.49 Psyr_3174 uroporphyrinogen-III C-methyltransferase / precorrin-2 dehydrogenase — —
Pseudomonas syringae pv. syringae B728a 0.59 Psyr_2009 2-oxoglutarate dehydrogenase E1 component 0.49 Psyr_3174 uroporphyrinogen-III C-methyltransferase / precorrin-2 dehydrogenase — —
Pseudomonas simiae WCS417 0.58 PS417_08895 2-oxoglutarate dehydrogenase 0.48 PS417_16465 sirohydrochlorin ferrochelatase — —
Pseudomonas fluorescens SBW25 0.58 PFLU_RS08955 2-oxoglutarate dehydrogenase E1 component 0.48 PFLU_RS18505 uroporphyrinogen-III C-methyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.58 PFLU_RS08955 2-oxoglutarate dehydrogenase E1 component 0.48 PFLU_RS18505 uroporphyrinogen-III C-methyltransferase — —
Pseudomonas putida KT2440 0.58 PP_4189 2-oxoglutarate decarboxylase, thiamine-requiring E1 subunit 0.47 PP_3999 Uroporphyrinogen-III C-methyltransferase/Precorrin-2 dehydrogenase/Sirohydrochlorin ferrochelatase — —
Acinetobacter radioresistens SK82 0.56 MPMX26_00751 2-oxoglutarate dehydrogenase E1 component 0.45 MPMX26_00706 Siroheme synthase — —
Lysobacter sp. OAE881 0.53 ABIE51_RS08990 2-oxoglutarate dehydrogenase E1 component 0.43 ABIE51_RS15855 siroheme synthase CysG — —
Rhodanobacter denitrificans MT42 0.53 LRK55_RS00725 2-oxoglutarate dehydrogenase E1 component 0.37 LRK55_RS00685 siroheme synthase CysG — —
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS00950 2-oxoglutarate dehydrogenase E1 component 0.38 LRK54_RS00910 siroheme synthase CysG — —
Rhodanobacter sp. FW510-T8 0.53 OKGIIK_05940 sucA 2-oxoglutarate dehydrogenase E1 component 0.40 OKGIIK_05980 cysG siroheme synthase CysG — —
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS05920 2-oxoglutarate dehydrogenase E1 component 0.44 ABZR86_RS05880 siroheme synthase CysG — —
Castellaniella sp019104865 MT123 0.52 ABCV34_RS01720 2-oxoglutarate dehydrogenase E1 component 0.40 ABCV34_RS00210 siroheme synthase CysG — —
Agrobacterium fabrum C58 0.42 Atu2636 oxoglutarate dehydrogenase E1 component 0.33 Atu3899 siroheme synthase — —
Bosea sp. OAE506 0.41 ABIE41_RS08975 2-oxoglutarate dehydrogenase E1 component 0.26 ABIE41_RS15910 siroheme synthase CysG — —
Dinoroseobacter shibae DFL-12 0.41 Dshi_2883 2-oxoglutarate dehydrogenase, E1 subunit (RefSeq) 0.27 Dshi_1155 uroporphyrin-III C-methyltransferase (RefSeq) — —
Rhodopseudomonas palustris CGA009 0.41 TX73_000980 2-oxoglutarate dehydrogenase E1 component 0.30 TX73_021850 siroheme synthase CysG low > 86
Sinorhizobium meliloti 1021 0.41 SMc02482 2-oxoglutarate dehydrogenase E1 component 0.32 SMc01053 siroheme synthase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.41 A4249_RS14430 2-oxoglutarate dehydrogenase E1 component 0.31 A4249_RS09675 siroheme synthase CysG — —
Rhodospirillum rubrum S1H 0.41 Rru_A1213 kgd alpha-ketoglutarate decarboxylase (RefSeq) 0.27 Rru_A1933 Uroporphyrin-III C-methyltransferase (NCBI) — —

Not shown: 34 genomes with orthologs for b0726 only; 2 genomes with orthologs for b3368 only