Conservation of cofitness between b2221 and b3271 in Escherichia coli BW25113

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2221 atoD acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (NCBI) 1.0 b3271 yhdZ predicted amino-acid transporter subunit (NCBI) 0.24 12
Escherichia coli BL21 1.00 ECD_02148 acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit 1.00 ECD_03129 putative amino acid ABC transporter ATPase low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01489 Acetate CoA-transferase subunit alpha 1.00 OHPLBJKB_00432 Glutamine transport ATP-binding protein GlnQ low > 73
Escherichia coli ECOR38 0.99 HEPCGN_22425 atoD acetate CoA-transferase subunit alpha 0.99 HEPCGN_16440 ABC transporter ATP-binding protein low > 85
Escherichia coli Nissle 1917 0.99 ECOLIN_RS12970 acetate CoA-transferase subunit alpha 0.98 ECOLIN_RS18790 amino acid ABC transporter ATP-binding protein
Escherichia fergusonii Becca 0.99 EFB2_01634 Acetate CoA-transferase subunit alpha 0.98 EFB2_00552 Glutamine transport ATP-binding protein GlnQ low > 86
Fusobacterium nucleatum SB010 0.59 HUW76_01850 CoA transferase subunit A 0.56 HUW76_06925 amino acid ABC transporter ATP-binding protein low > 35
Azospirillum sp. SherDot2 0.55 MPMX19_03462 Acetate CoA-transferase subunit alpha 0.79 MPMX19_01335 Glutamine transport ATP-binding protein GlnQ low > 112
Rhodospirillum rubrum S1H 0.53 Rru_A1472 Acetate CoA-transferase (NCBI) 0.76 Rru_A1001 ABC transporter component (NCBI) low > 58
Shewanella loihica PV-4 0.45 Shew_2575 3-oxoacid CoA-transferase, A subunit (RefSeq) 0.53 Shew_3164 ABC transporter-related protein (RefSeq)
Shewanella oneidensis MR-1 0.45 SO1892 atoD acetate CoA-transferase, subunit A (NCBI ptt file) 0.53 SO1042 amino acid ABC transporter, ATP-binding protein (NCBI ptt file) low > 76
Cupriavidus basilensis FW507-4G11 0.44 RR42_RS06555 3-oxoacid CoA-transferase (EC 2.8.3.5), subunit A (from data) 0.70 RR42_RS16370 glutamine ABC transporter ATP-binding protein low > 128
Ralstonia solanacearum GMI1000 0.44 RS_RS07905 CoA transferase subunit A 0.58 RS_RS11345 amino acid ABC transporter ATP-binding protein
Shewanella sp. ANA-3 0.44 Shewana3_1667 3-oxoacid CoA-transferase, A subunit (RefSeq) 0.53 Shewana3_0880 ABC transporter related (RefSeq)
Pseudomonas putida KT2440 0.43 PP_3951 3-oxoadipate CoA-transferase subunit A 0.82 PP_1300 putative amino acid ABC transporter - ATP-binding subunit low > 96
Rhodopseudomonas palustris CGA009 0.43 TX73_021545 CoA transferase subunit A 0.70 TX73_013255 amino acid ABC transporter ATP-binding protein low > 86
Bosea sp. OAE506 0.43 ABIE41_RS01850 CoA transferase subunit A 0.74 ABIE41_RS16010 amino acid ABC transporter ATP-binding protein low > 77
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS18090 3-oxoacid CoA-transferase subunit A 0.68 QEN71_RS40280 amino acid ABC transporter ATP-binding protein
Castellaniella sp019104865 MT123 0.42 ABCV34_RS01360 3-oxoacid CoA-transferase subunit A 0.72 ABCV34_RS08630 amino acid ABC transporter ATP-binding protein low > 48
Variovorax sp. OAS795 0.42 ABID97_RS19440 CoA transferase subunit A 0.71 ABID97_RS13305 amino acid ABC transporter ATP-binding protein
Ralstonia sp. UNC404CL21Col 0.42 ABZR87_RS15800 3-oxoacid CoA-transferase subunit A 0.58 ABZR87_RS15830 amino acid ABC transporter ATP-binding protein low > 80
Ralstonia solanacearum IBSBF1503 0.41 RALBFv3_RS03870 3-oxoadipate CoA-transferase subunit A 0.57 RALBFv3_RS03900 amino acid ABC transporter ATP-binding protein low > 76
Ralstonia solanacearum UW163 0.41 UW163_RS09800 3-oxoadipate CoA-transferase subunit A 0.58 UW163_RS09770 amino acid ABC transporter ATP-binding protein
Variovorax sp. SCN45 0.41 GFF7371 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) 0.74 GFF4213 ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines)
Ralstonia solanacearum PSI07 0.41 RPSI07_RS13360 3-oxoadipate CoA-transferase subunit A 0.58 RPSI07_RS13330 amino acid ABC transporter ATP-binding protein
Agrobacterium fabrum C58 0.40 Atu4547 3-oxoadipate CoA-transferase subunit A 0.77 Atu1580 ABC transporter, nucleotide binding/ATPase protein (amino acid) low > 89
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF5197 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) 0.68 GFF1640 amino acid ABC transporter, ATP-binding protein
Enterobacter asburiae PDN3 0.40 EX28DRAFT_1708 3-oxoacid CoA-transferase, A subunit 0.95 EX28DRAFT_3324 ABC-type polar amino acid transport system, ATPase component low > 76
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_5833 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) 0.83 Pf1N1B4_914 ABC-type polar amino acid transport system, ATPase component low > 87
Pseudomonas simiae WCS417 0.40 PS417_10525 succinyl-CoA:3-ketoacid-CoA transferase 0.83 PS417_04915 glutamine ABC transporter ATP-binding protein
Pseudomonas fluorescens SBW25 0.40 PFLU_RS10585 CoA transferase subunit A 0.83 PFLU_RS04975 amino acid ABC transporter ATP-binding protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS10585 CoA transferase subunit A 0.83 PFLU_RS04975 amino acid ABC transporter ATP-binding protein low > 109
Pseudomonas stutzeri RCH2 0.40 Psest_1078 acetyl-CoA:acetoacetate CoA transferase, A subunit (EC 2.8.3.8) (from data) 0.80 Psest_3160 ABC-type polar amino acid transport system, ATPase component
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_21650 succinyl-CoA--3-ketoacid-CoA transferase 0.82 AO356_17395 glutamine ABC transporter ATP-binding protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.40 Pf6N2E2_2111 Dehydrocarnitine CoA-transferase and acetoacetate CoA-transferase, subunit A (from data) 0.82 Pf6N2E2_5405 ABC transporter for D-Alanine, ATPase component (from data) low > 103
Escherichia coli ECOR27 0.39 NOLOHH_18990 atoD succinyl-CoA--3-ketoacid-CoA transferase 0.99 NOLOHH_09410 yhdZ Uncharacterized amino-acid ABC transporter ATP-binding protein YhdZ
Escherichia coli ECRC62 0.39 BNILDI_17475 atoD succinyl-CoA--3-ketoacid-CoA transferase 0.99 BNILDI_02110 yhdZ Uncharacterized amino-acid ABC transporter ATP-binding protein YhdZ
Pseudomonas sp. RS175 0.39 PFR28_01325 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A 0.82 PFR28_03539 Glutamine transport ATP-binding protein GlnQ low > 88
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_27935 succinyl-CoA--3-ketoacid-CoA transferase 0.83 AO353_04600 glutamine ABC transporter ATP-binding protein low > 101
Enterobacter sp. TBS_079 0.39 MPMX20_01912 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A 0.95 MPMX20_04180 Glutamine transport ATP-binding protein GlnQ low > 85
Rhizobium sp. OAE497 0.38 ABIE40_RS19560 3-oxoacid CoA-transferase subunit A 0.76 ABIE40_RS08800 amino acid ABC transporter ATP-binding protein low > 107
Dinoroseobacter shibae DFL-12 0.38 Dshi_1136 3-oxoacid CoA-transferase, A subunit (RefSeq) 0.74 Dshi_0321 ABC transporter related (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.38 PGA1_c06210 probable succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A 0.76 PGA1_c02010 glutamate/glutamine/aspartate/asparagine transport ATP-binding protein BztD low > 62
Pseudomonas syringae pv. syringae B728a ΔmexB 0.36 Psyr_3237 3-oxoacid CoA-transferase 0.83 Psyr_1075 amino acid ABC transporter ATP-binding protein, PAAT family low > 86
Pseudomonas syringae pv. syringae B728a 0.36 Psyr_3237 3-oxoacid CoA-transferase 0.83 Psyr_1075 amino acid ABC transporter ATP-binding protein, PAAT family low > 86

Not shown: 22 genomes with orthologs for b2221 only; 22 genomes with orthologs for b3271 only