Conservation of cofitness between b0651 and b0472 in Escherichia coli BW25113

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0651 rihA ribonucleoside hydrolase 1 (NCBI) 1.0 b0472 recR recombination protein RecR (NCBI) 0.14 17
Escherichia coli BL21 1.00 ECD_00617 ribonucleoside hydrolase 1 1.00 ECD_00423 gap repair protein low > 60
Escherichia coli ECRC99 1.00 KEDOAH_20695 rihA pyrimidine-specific ribonucleoside hydrolase RihA 1.00 KEDOAH_19810 recR recombination mediator RecR — —
Escherichia coli ECRC98 1.00 JDDGAC_10920 rihA pyrimidine-specific ribonucleoside hydrolase RihA 1.00 JDDGAC_11805 recR recombination mediator RecR — —
Escherichia coli ECRC101 1.00 MCAODC_26490 rihA pyrimidine-specific ribonucleoside hydrolase RihA 1.00 MCAODC_27380 recR recombination mediator RecR — —
Escherichia coli ECRC101 1.00 OKFHMN_07275 rihA pyrimidine-specific ribonucleoside hydrolase RihA 1.00 OKFHMN_08155 recR recombination mediator RecR — —
Escherichia coli ECRC102 1.00 NIAGMN_05330 rihA pyrimidine-specific ribonucleoside hydrolase RihA 1.00 NIAGMN_06210 recR recombination mediator RecR — —
Escherichia coli ECOR27 0.99 NOLOHH_23660 rihA pyrimidine-specific ribonucleoside hydrolase RihA 1.00 NOLOHH_01085 recR recombination mediator RecR low > 57
Escherichia coli ECRC62 0.99 BNILDI_21670 rihA pyrimidine-specific ribonucleoside hydrolase RihA 1.00 BNILDI_22505 recR recombination mediator RecR — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_03062 Pyrimidine-specific ribonucleoside hydrolase RihA 1.00 OHPLBJKB_03202 Recombination protein RecR 0.40 27
Escherichia coli ECOR38 0.99 HEPCGN_00955 rihA pyrimidine-specific ribonucleoside hydrolase RihA 1.00 HEPCGN_06770 recR recombination mediator RecR low > 85
Escherichia coli Nissle 1917 0.99 ECOLIN_RS03505 pyrimidine-specific ribonucleoside hydrolase RihA 1.00 ECOLIN_RS02805 recombination mediator RecR — —
Escherichia fergusonii Becca 0.99 EFB2_03448 Pyrimidine-specific ribonucleoside hydrolase RihA 1.00 EFB2_03586 Recombination protein RecR low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF4569 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) 0.96 GFF4390 Recombination protein RecR low > 78
Klebsiella michiganensis M5al 0.90 BWI76_RS13490 pyrimidine-specific ribonucleoside hydrolase RihA 0.96 BWI76_RS06830 recombination protein RecR low > 92
Enterobacter sp. TBS_079 0.89 MPMX20_01302 Pyrimidine-specific ribonucleoside hydrolase RihA 0.96 MPMX20_01074 Recombination protein RecR low > 85
Enterobacter asburiae PDN3 0.89 EX28DRAFT_2320 Inosine-uridine nucleoside N-ribohydrolase 0.95 EX28DRAFT_2485 DNA replication and repair protein RecR low > 76
Shewanella loihica PV-4 0.74 Shew_0697 rihA ribonucleoside hydrolase 1 (RefSeq) 0.67 Shew_2233 recombination protein RecR (RefSeq) low > 60
Shewanella sp. ANA-3 0.73 Shewana3_3476 rihA ribonucleoside hydrolase 1 (RefSeq) 0.65 Shewana3_2444 recR recombination protein RecR (RefSeq) low > 73
Shewanella oneidensis MR-1 0.73 SO0811 inosine-uridine preferring nucleoside hydrolase family protein (NCBI ptt file) 0.64 SO2015 recR recombination protein RecR (NCBI ptt file) low > 76
Serratia liquefaciens MT49 0.62 IAI46_05975 pyrimidine-specific ribonucleoside hydrolase RihA 0.91 IAI46_05240 recombination protein RecR low > 86
Sinorhizobium meliloti 1021 0.43 SMc01105 uridine nucleosidase (EC 3.2.2.3) (from data) 0.36 SMc02908 recombination protein RecR 0.23 54
Dinoroseobacter shibae DFL-12 0.42 Dshi_1158 Inosine/uridine-preferring nucleoside hydrolase (RefSeq) 0.36 Dshi_0648 recombination protein RecR (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.40 PGA1_c11490 pyrimidine-specific ribonucleoside hydrolase RihA 0.34 PGA1_c30290 recombination protein RecR low > 62
Agrobacterium fabrum C58 0.40 Atu0374 inosine-uridine preferring nucleoside hydrolase 0.35 Atu0093 Recombination protein low > 89
Rahnella sp. WP5 0.40 EX31_RS20270 nucleoside hydrolase 0.90 EX31_RS22525 recombination protein RecR low > 89
Bifidobacterium breve UCC2003 0.39 BBR_RS17815 nucleoside hydrolase 0.37 BBR_RS10990 recombination protein RecR low > 34
Rhizobium sp. OAE497 0.39 ABIE40_RS01655 nucleoside hydrolase 0.35 ABIE40_RS00300 recombination mediator RecR low > 107
Pectobacterium carotovorum WPP14 0.37 HER17_RS00105 nucleoside hydrolase 0.89 HER17_RS15695 recombination mediator RecR low > 75
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF2248 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) 0.51 GFF4253 Recombination protein RecR low > 90
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_20845 uridine/adenosine nucleosidase (EC 3.2.2.3; EC 3.2.2.7) (from data) 0.61 AO353_00675 recombination protein RecR low > 101
Variovorax sp. SCN45 0.34 GFF2986 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) 0.49 GFF1110 Recombination protein RecR low > 127
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_167 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) 0.61 Pf6N2E2_2325 Recombination protein RecR low > 103
Ralstonia solanacearum GMI1000 0.34 RS_RS12775 nucleoside hydrolase 0.48 RS_RS05980 recombination protein RecR low > 80
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_6029 uridine nucleosidase (EC 3.2.2.3) (from data) 0.61 Pf1N1B4_3864 Recombination protein RecR low > 87
Ralstonia solanacearum PSI07 0.34 RPSI07_RS12145 nucleoside hydrolase 0.48 RPSI07_RS18205 recombination protein RecR low > 81
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_00940 uridine/adenosine nucleosidase (EC 3.2.2.3; EC 3.2.2.7) (from data) 0.61 AO356_02495 recombination protein RecR low > 104
Pseudomonas fluorescens SBW25 0.33 PFLU_RS20350 nucleoside hydrolase 0.62 PFLU_RS22415 recombination protein RecR low > 109
Pseudomonas simiae WCS417 0.33 PS417_18375 hypothetical protein 0.62 PS417_20800 recombination protein RecR low > 88
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS20350 nucleoside hydrolase 0.62 PFLU_RS22415 recombination protein RecR low > 109
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_3906 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) 0.60 PfGW456L13_4074 Recombination protein RecR low > 87
Pseudomonas putida KT2440 0.33 PP_2460 ribonucleoside hydrolase 0.64 PP_4267 Recombination protein RecR low > 96
Bosea sp. OAE506 0.29 ABIE41_RS05160 nucleoside hydrolase 0.36 ABIE41_RS04035 recombination mediator RecR — —
Brevundimonas sp. GW460-12-10-14-LB2 0.26 A4249_RS15760 nucleoside hydrolase 0.33 A4249_RS15115 recombination mediator RecR — —
Xanthomonas campestris pv. campestris strain 8004 0.23 Xcc-8004.1203.1 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) 0.54 Xcc-8004.4012.1 Recombination protein RecR low > 74
Mycobacterium tuberculosis H37Rv 0.21 Rv3393 Probable nucleoside hydrolase IunH (purine nucleosidase) 0.38 Rv3715c Probable recombination protein RecR low > 58
Rhodanobacter denitrificans FW104-10B01 0.19 LRK54_RS11810 nucleoside hydrolase 0.57 LRK54_RS01250 recombination mediator RecR low > 59
Rhodanobacter denitrificans MT42 0.19 LRK55_RS11535 nucleoside hydrolase 0.57 LRK55_RS01020 recombination mediator RecR low > 63

Not shown: 0 genomes with orthologs for b0651 only; 53 genomes with orthologs for b0472 only