Conservation of cofitness between b3034 and b0051 in Escherichia coli BW25113

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3034 nudF ADP-ribose pyrophosphatase (NCBI) 1.0 b0051 ksgA dimethyladenosine transferase (NCBI) 0.27 7
Escherichia coli ECRC99 1.00 KEDOAH_09335 nudF ADP-ribose diphosphatase 1.00 KEDOAH_17320 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS17510 ADP-ribose diphosphatase 1.00 ECOLIN_RS00285 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Escherichia coli ECRC102 1.00 NIAGMN_16575 nudF ADP-ribose diphosphatase 1.00 NIAGMN_08685 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA — —
Escherichia coli ECRC101 1.00 MCAODC_09325 nudF ADP-ribose diphosphatase 1.00 MCAODC_01350 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA — —
Escherichia coli ECRC62 1.00 BNILDI_00900 nudF ADP-ribose diphosphatase 1.00 BNILDI_08425 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA — —
Escherichia coli ECOR38 1.00 HEPCGN_17685 nudF ADP-ribose diphosphatase 1.00 HEPCGN_08825 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA 0.86 13
Escherichia coli ECRC101 1.00 OKFHMN_18810 nudF ADP-ribose diphosphatase 1.00 OKFHMN_10835 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA — —
Escherichia coli BL21 1.00 ECD_02906 ADP-ribose pyrophosphatase 1.00 ECD_00055 16S rRNA m(6)A1518, m(6)A1519 dimethyltransferase, SAM-dependent — —
Escherichia fergusonii Becca 1.00 EFB2_00774 ADP-ribose pyrophosphatase 1.00 EFB2_03992 Ribosomal RNA small subunit methyltransferase A low > 86
Escherichia coli ECOR27 1.00 NOLOHH_10615 nudF ADP-ribose diphosphatase 1.00 NOLOHH_03180 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA — —
Escherichia coli ECRC98 1.00 JDDGAC_22445 nudF ADP-ribose diphosphatase 1.00 JDDGAC_14430 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00669 ADP-ribose pyrophosphatase 1.00 OHPLBJKB_03605 Ribosomal RNA small subunit methyltransferase A low > 73
Enterobacter sp. TBS_079 0.91 MPMX20_03881 ADP-ribose pyrophosphatase 0.94 MPMX20_00747 Ribosomal RNA small subunit methyltransferase A low > 85
Enterobacter asburiae PDN3 0.91 EX28DRAFT_3072 nudix-type nucleoside diphosphatase, YffH/AdpP family 0.93 EX28DRAFT_3645 ribosomal RNA small subunit methyltransferase A low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.89 GFF3148 ADP-ribose pyrophosphatase (EC 3.6.1.13) 0.96 GFF190 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) low > 78
Klebsiella michiganensis M5al 0.86 BWI76_RS24395 ADP-ribose diphosphatase 0.95 BWI76_RS04520 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase — —
Serratia liquefaciens MT49 0.82 IAI46_21940 ADP-ribose diphosphatase 0.81 IAI46_03245 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Rahnella sp. WP5 0.80 EX31_RS08095 ADP-ribose diphosphatase 0.77 EX31_RS03780 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Dickeya dianthicola ME23 0.77 DZA65_RS01715 ADP-ribose diphosphatase 0.78 DZA65_RS19340 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Pantoea sp. MT58 0.77 IAI47_03140 ADP-ribose diphosphatase 0.80 IAI47_16085 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA low > 76
Dickeya dadantii 3937 0.77 DDA3937_RS01745 ADP-ribose diphosphatase 0.79 DDA3937_RS18265 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA low > 74
Dickeya dianthicola 67-19 0.77 HGI48_RS01640 ADP-ribose diphosphatase 0.78 HGI48_RS18200 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Erwinia tracheiphila SCR3 0.74 LU632_RS20630 nudF ADP-ribose diphosphatase 0.83 LU632_RS02730 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA low > 74
Pectobacterium carotovorum WPP14 0.72 HER17_RS19820 ADP-ribose diphosphatase 0.80 HER17_RS02960 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA low > 75
Shewanella amazonensis SB2B 0.58 Sama_3047 ADP-ribose diphosphatase (RefSeq) 0.61 Sama_2819 ksgA dimethyladenosine transferase (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.57 CSW01_12330 ADP-ribose diphosphatase 0.65 CSW01_02325 ribosomal RNA small subunit methyltransferase A — —
Shewanella loihica PV-4 0.56 Shew_0545 ADP-ribose diphosphatase (RefSeq) 0.63 Shew_0879 ksgA dimethyladenosine transferase (RefSeq) — —
Alteromonas macleodii MIT1002 0.55 MIT1002_00671 ADP-ribose pyrophosphatase 0.62 MIT1002_00781 Ribosomal RNA small subunit methyltransferase A low > 70
Shewanella sp. ANA-3 0.54 Shewana3_0726 nucleoside diphosphate pyrophosphatase (RefSeq) 0.60 Shewana3_3209 ksgA dimethyladenosine transferase (RefSeq) — —
Shewanella oneidensis MR-1 0.53 SO3903 MutT/nudix family protein (NCBI ptt file) 0.60 SO3639 ksgA dimethyladenosine transferase (NCBI ptt file) low > 76
Pseudomonas stutzeri RCH2 0.48 Psest_0479 nudix-type nucleoside diphosphatase, YffH/AdpP family 0.45 Psest_3668 dimethyladenosine transferase — —
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_08795 ADP-ribose pyrophosphatase 0.47 AO356_14335 rRNA methyltransferase low > 104
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_3641 ADP-ribose pyrophosphatase (EC 3.6.1.13) 0.47 Pf6N2E2_4805 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) — —
Pseudomonas sp. S08-1 0.46 OH686_15835 ADP-ribose pyrophosphatase 0.47 OH686_15040 ribosomal RNA small subunit methyltransferase A low > 80
Pseudomonas sp. RS175 0.46 PFR28_05094 ADP-ribose pyrophosphatase 0.47 PFR28_04064 Ribosomal RNA small subunit methyltransferase A low > 88
Pseudomonas fluorescens SBW25 0.46 PFLU_RS02445 NUDIX domain-containing protein 0.47 PFLU_RS27465 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA low > 109
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS02445 NUDIX domain-containing protein 0.47 PFLU_RS27465 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA low > 109
Pseudomonas fluorescens FW300-N2E3 0.45 AO353_13025 ADP-ribose pyrophosphatase 0.47 AO353_07315 rRNA methyltransferase low > 101
Pseudomonas simiae WCS417 0.45 PS417_02370 ADP-ribose pyrophosphatase 0.47 PS417_25810 ribosomal RNA small subunit methyltransferase A — —
Pseudomonas putida KT2440 0.44 PP_4919 ADP-ribose/sugar pyrophosphatase 0.47 PP_0401 Ribosomal RNA small subunit methyltransferase A low > 96
Pseudomonas fluorescens GW456-L13 0.44 PfGW456L13_182 ADP-ribose pyrophosphatase (EC 3.6.1.13) 0.47 PfGW456L13_1200 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) — —
Marinobacter adhaerens HP15 0.44 HP15_454 nucleoside diphosphate pyrophosphatase 0.50 HP15_3278 dimethyladenosine transferase low > 73
Magnetospirillum magneticum AMB-1 0.44 AMB_RS06645 NUDIX domain-containing protein 0.30 AMB_RS18820 dimethyladenosine transferase — —
Pseudomonas fluorescens FW300-N1B4 0.44 Pf1N1B4_1444 ADP-ribose pyrophosphatase (EC 3.6.1.13) 0.47 Pf1N1B4_2528 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) — —
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_0547 Conserved hypothetical protein 52 0.48 Psyr_4627 dimethyladenosine transferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_0547 Conserved hypothetical protein 52 0.48 Psyr_4627 dimethyladenosine transferase low > 86
Kangiella aquimarina DSM 16071 0.42 B158DRAFT_0975 nudix-type nucleoside diphosphatase, YffH/AdpP family 0.50 B158DRAFT_0788 dimethyladenosine transferase low > 40
Rhodospirillum rubrum S1H 0.37 Rru_A1525 Nucleoside diphosphate pyrophosphatase (NCBI) 0.29 Rru_A0431 16S rRNA dimethylase (NCBI) — —
Azospirillum sp. SherDot2 0.37 MPMX19_01327 ADP-ribose pyrophosphatase 0.30 MPMX19_01514 Ribosomal RNA small subunit methyltransferase A — —
Azospirillum brasilense Sp245 0.37 AZOBR_RS08710 ADP-ribose pyrophosphatase 0.29 AZOBR_RS16340 16S rRNA methyltransferase low > 97
Acinetobacter radioresistens SK82 0.31 MPMX26_00179 ADP-ribose pyrophosphatase 0.49 MPMX26_00596 Ribosomal RNA small subunit methyltransferase A — —
Rhodopseudomonas palustris CGA009 0.24 TX73_019105 NUDIX hydrolase 0.27 TX73_015860 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA low > 86

Not shown: 0 genomes with orthologs for b3034 only; 49 genomes with orthologs for b0051 only