| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Rhodospirillum rubrum S1H | 1.0 | Rru_A1748 | | ABC transporter component (NCBI) | 1.0 | Rru_A2401 | | RuBisCO transcriptional regulator cbbR, LysR family (NCBI) | 0.60 | 20 |
| Azospirillum sp. SherDot2 | 0.74 | MPMX19_06005 | | High-affinity branched-chain amino acid transport ATP-binding protein LivF | 0.41 | MPMX19_02949 | | HTH-type transcriptional activator CmpR | — | — |
| Sinorhizobium meliloti 1021 | 0.71 | SMc01948 | | high-affinity branched-chain amino acid ABC transporter ATP-binding protein | 0.35 | SM_b20203 | | transcriptional regulator | — | — |
| Rhodopseudomonas palustris CGA009 | 0.66 | TX73_019725 | | ABC transporter ATP-binding protein | 0.38 | TX73_007990 | | LysR family transcriptional regulator | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.62 | RR42_RS14405 | | leucine/isoleucine/valine transporter ATP-binding subunit | 0.40 | RR42_RS31340 | | transcriptional regulator | low | > 128 |
| Variovorax sp. OAS795 | 0.62 | ABID97_RS27565 | | ABC transporter ATP-binding protein | 0.39 | ABID97_RS24450 | | LysR family transcriptional regulator | low | > 91 |
| Castellaniella sp019104865 MT123 | 0.62 | ABCV34_RS03635 | | ABC transporter ATP-binding protein | 0.21 | ABCV34_RS05920 | | LysR substrate-binding domain-containing protein | low | > 48 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.61 | Psyr_0601 | | amino acid/amide ABC transporter ATP-binding protein 2, HAAT family | 0.32 | Psyr_5062 | | transcriptional regulator, LysR family | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.61 | Psyr_0601 | | amino acid/amide ABC transporter ATP-binding protein 2, HAAT family | 0.32 | Psyr_5062 | | transcriptional regulator, LysR family | low | > 86 |
| Pseudomonas putida KT2440 | 0.61 | PP_4863 | | high-affinity branched-chain amino acid transporter, ATP-binding | 0.34 | PP_5348 | | Transcriptional regulator, LysR family | low | > 96 |
| Klebsiella michiganensis M5al | 0.61 | BWI76_RS26330 | | ABC transporter ATP-binding protein | 0.20 | BWI76_RS19690 | | LysR family transcriptional regulator | low | > 92 |
| Pectobacterium carotovorum WPP14 | 0.61 | HER17_RS00515 | | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | 0.22 | HER17_RS12840 | | LysR family transcriptional regulator | low | > 75 |
| Herbaspirillum seropedicae SmR1 | 0.60 | HSERO_RS08290 | | leucine/isoleucine/valine transporter ATP-binding subunit | 0.18 | HSERO_RS13130 | | LysR family transcriptional regulator | low | > 78 |
| Rahnella sp. WP5 | 0.60 | EX31_RS14785 | | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | 0.21 | EX31_RS19050 | | LysR family transcriptional regulator | low | > 89 |
| Pseudomonas fluorescens FW300-N1B4 | 0.60 | Pf1N1B4_1378 | | Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) | 0.34 | Pf1N1B4_2009 | | LysR family transcriptional regulator PA5437 | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.60 | AO353_13360 | | ABC transporter ATP-binding protein | 0.35 | AO353_10035 | | LysR family transcriptional regulator | low | > 101 |
| Pseudomonas fluorescens GW456-L13 | 0.60 | PfGW456L13_120 | | Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) | 0.35 | PfGW456L13_727 | | LysR family transcriptional regulator PA5437 | 0.29 | 51 |
| Pseudomonas fluorescens FW300-N2E2 | 0.59 | Pf6N2E2_3576 | | Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) | 0.35 | Pf6N2E2_4277 | | LysR family transcriptional regulator PA5437 | low | > 103 |
| Serratia liquefaciens MT49 | 0.59 | IAI46_17065 | | ABC transporter ATP-binding protein | 0.21 | IAI46_17215 | | LysR family transcriptional regulator | low | > 86 |
| Pseudomonas simiae WCS417 | 0.59 | PS417_02675 | | ABC transporter ATP-binding protein | 0.35 | PS417_28220 | | LysR family transcriptional regulator | low | > 88 |
| Dickeya dianthicola 67-19 | 0.59 | HGI48_RS20710 | | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | 0.21 | HGI48_RS09285 | | LysR family transcriptional regulator | low | > 71 |
| Dickeya dadantii 3937 | 0.59 | DDA3937_RS00680 | | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | 0.21 | DDA3937_RS09260 | | LysR family transcriptional regulator | low | > 74 |
| Pseudomonas fluorescens FW300-N2C3 | 0.59 | AO356_08480 | | ABC transporter ATP-binding protein | 0.35 | AO356_12015 | | LysR family transcriptional regulator | low | > 104 |
| Pseudomonas fluorescens SBW25 | 0.59 | PFLU_RS02745 | | ABC transporter ATP-binding protein | 0.34 | PFLU_RS29885 | | LysR family transcriptional regulator | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.59 | PFLU_RS02745 | | ABC transporter ATP-binding protein | 0.34 | PFLU_RS29885 | | LysR family transcriptional regulator | 0.14 | 101 |
| Pseudomonas sp. RS175 | 0.58 | PFR28_05157 | | High-affinity branched-chain amino acid transport ATP-binding protein LivF | 0.35 | PFR28_04519 | | HTH-type transcriptional activator CmpR | low | > 88 |
| Pseudomonas stutzeri RCH2 | 0.54 | Psest_1308 | | ABC-type branched-chain amino acid transport systems, ATPase component | 0.31 | Psest_4086 | | Transcriptional regulator | low | > 67 |
| Pseudomonas sp. S08-1 | 0.52 | OH686_04625 | | Branched-chain amino acid ABC transporter, ATP-binding protein LivF | 0.32 | OH686_13195 | | Transcriptional regulator, LysR family | low | > 80 |
| Fusobacterium nucleatum SB010 | 0.50 | HUW76_08095 | | ABC transporter ATP-binding protein | 0.11 | HUW76_07535 | | LysR family transcriptional regulator | low | > 35 |
| Ralstonia solanacearum IBSBF1503 | 0.50 | RALBFv3_RS04675 | | ABC transporter ATP-binding protein | 0.21 | RALBFv3_RS14705 | | LysR family transcriptional regulator | low | > 76 |
| Ralstonia solanacearum UW163 | 0.50 | UW163_RS08995 | | ABC transporter ATP-binding protein | 0.21 | UW163_RS12175 | | LysR family transcriptional regulator | — | — |
| Dechlorosoma suillum PS | 0.49 | Dsui_2057 | | ABC-type branched-chain amino acid transport systems, ATPase component | 0.32 | Dsui_2869 | | transcriptional regulator | low | > 51 |
| Variovorax sp. SCN45 | 0.49 | GFF2170 | | Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) | 0.22 | GFF1740 | | Transcriptional regulator, LysR family | low | > 127 |
| Burkholderia phytofirmans PsJN | 0.49 | BPHYT_RS31755 | | amino acid ABC transporter ATPase | 0.45 | BPHYT_RS29890 | | LysR family transcriptional regulator | low | > 109 |
| Paraburkholderia graminis OAS925 | 0.49 | ABIE53_005651 | | branched-chain amino acid transport system ATP-binding protein | 0.44 | ABIE53_005077 | | DNA-binding transcriptional LysR family regulator | low | > 113 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.49 | GFF781 | | Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) | 0.43 | GFF2192 | | Cys regulon transcriptional activator CysB | low | > 90 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.48 | H281DRAFT_04059 | | amino acid/amide ABC transporter ATP-binding protein 2, HAAT family | 0.44 | H281DRAFT_03013 | | transcriptional regulator, LysR family | low | > 103 |
| Acidovorax sp. GW101-3H11 | 0.48 | Ac3H11_1692 | | ABC transporter for glutamine/isoleucine/leucine/phenylalanine/proline/serine/tyrosine, ATPase component 2 (from data) | 0.30 | Ac3H11_3174 | | RuBisCO operon transcriptional regulator | low | > 79 |