Homologs of Rv3648c from Mycobacterium tuberculosis H37Rv

Probable cold shock protein A CspA
SEED: Cold shock protein CspA
KEGG: cold shock protein (beta-ribbon, CspA family)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Mycobacterium tuberculosis H37Rv Rv3648c Probable cold shock protein A CspA no data 100 100
o Pseudomonas simiae WCS417 PS417_19715 cold-shock protein no data 70 100
o Rhodanobacter denitrificans MT42 LRK55_RS16740 cold-shock protein no data 66 96
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS17025 cold-shock protein insig. 66 96
o Pseudomonas fluorescens SBW25 PFLU_RS21685 cold-shock protein insig. 67 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS21685 cold-shock protein sig. 67 100
o Pantoea sp. MT58 IAI47_15080 cold-shock protein strong 65 97
o Escherichia coli BL21 ECD_00992 cold shock protein-like protein, cold-inducible no data 66 96
o Escherichia fergusonii Becca EFB2_03089 Cold shock-like protein CspG insig. 66 96
o Escherichia coli ECOR27 NOLOHH_21625 cspG cold shock protein CspG no data 66 96
o Escherichia coli ECOR38 HEPCGN_23410 cspG cold shock protein CspG no data 66 96
o Escherichia coli ECRC101 OKFHMN_04730 cspG cold shock protein CspG no data 66 96
o Escherichia coli ECRC101 MCAODC_24115 cspG cold shock protein CspG no data 66 96
o Escherichia coli ECRC102 NIAGMN_23120 cspG cold shock protein CspG no data 66 96
o Escherichia coli ECRC62 BNILDI_19790 cspG cold shock protein CspG no data 66 96
o Escherichia coli ECRC98 JDDGAC_08340 cspG cold shock protein CspG no data 66 96
o Escherichia coli ECRC99 KEDOAH_23015 cspG cold shock protein CspG no data 66 96
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02677 Cold shock-like protein CspG no data 66 96
o Escherichia coli Nissle 1917 ECOLIN_RS05165 cold shock protein CspG no data 66 96
o Escherichia coli BW25113 b0990 cspG DNA-binding transcriptional regulator (NCBI) insig. 66 96
o Erwinia tracheiphila SCR3 LU632_RS19015 cspA RNA chaperone/antiterminator CspA insig. 67 96
o Paraburkholderia graminis OAS925 ABIE53_004735 CspA family cold shock protein strong 59 96
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3660.1 Cold shock protein CspD insig. 59 96
  Burkholderia phytofirmans PsJN BPHYT_RS34185 cold-shock protein sig. 58 97
o Burkholderia phytofirmans PsJN BPHYT_RS10920 cold-shock protein no data 58 100
o Cupriavidus basilensis FW507-4G11 RR42_RS37135 cold-shock protein insig. 63 100
o Ralstonia solanacearum GMI1000 RS_RS17205 cold-shock protein strong 60 97
o Ralstonia solanacearum PSI07 RPSI07_RS00010 cold-shock protein no data 60 97
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03525 cold-shock DNA-binding protein family sig. 59 96
  Cupriavidus basilensis FW507-4G11 RR42_RS20855 cold-shock protein sig. 58 97
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01154 cold-shock DNA-binding protein family no data 57 100
  Paraburkholderia graminis OAS925 ABIE53_002280 CspA family cold shock protein no data 57 100
  Pantoea sp. MT58 IAI47_14075 transcription antiterminator/RNA stability regulator CspE sig. 65 97
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3991 Cold shock protein CspG no data 64 96
  Erwinia tracheiphila SCR3 LU632_RS16440 cspE transcription antiterminator/RNA stability regulator CspE no data 62 97
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS23260 cold-shock protein no data 60 97
o Ralstonia solanacearum UW163 UW163_RS16510 cold-shock protein no data 60 97
o Enterobacter asburiae PDN3 EX28DRAFT_2340 Cold shock proteins no data 63 97
o Enterobacter sp. TBS_079 MPMX20_01283 Cold shock-like protein CspE sig. 63 97
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4536 Cold shock protein CspE no data 63 97
o Pectobacterium carotovorum WPP14 HER17_RS15290 transcription antiterminator/RNA stability regulator CspE cofit 62 97
  Escherichia coli BL21 ECD_00593 constitutive cold shock family transcription antitermination protein; negative regulator of cspA transcription; RNA melting protein; ssDNA-binding protein insig. 63 97
  Escherichia fergusonii Becca EFB2_03468 Cold shock-like protein CspE insig. 63 97
  Escherichia coli ECOR27 NOLOHH_23795 cspE transcription antiterminator/RNA stability regulator CspE insig. 63 97
  Escherichia coli ECOR38 HEPCGN_00855 cspE transcription antiterminator/RNA stability regulator CspE cofit 63 97
  Escherichia coli ECRC101 OKFHMN_07420 cspE transcription antiterminator/RNA stability regulator CspE strong 63 97
  Escherichia coli ECRC101 MCAODC_26635 cspE transcription antiterminator/RNA stability regulator CspE sig. 63 97
  Escherichia coli ECRC102 NIAGMN_05475 cspE transcription antiterminator/RNA stability regulator CspE sig. 63 97
  Escherichia coli ECRC62 BNILDI_21805 cspE transcription antiterminator/RNA stability regulator CspE insig. 63 97
  Escherichia coli ECRC98 JDDGAC_11065 cspE transcription antiterminator/RNA stability regulator CspE no data 63 97
  Escherichia coli ECRC99 KEDOAH_20550 cspE transcription antiterminator/RNA stability regulator CspE no data 63 97
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03082 Cold shock-like protein CspE strong 63 97
  Escherichia coli Nissle 1917 ECOLIN_RS03400 transcription antiterminator/RNA stability regulator CspE cofit 63 97
  Escherichia coli BW25113 b0623 cspE cold shock protein E (NCBI) strong 63 97
o Lysobacter sp. OAE881 ABIE51_RS13800 cold-shock protein strong 58 97
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS07090 cold-shock protein no data 64 96
o Dickeya dadantii 3937 DDA3937_RS06115 transcription antiterminator/RNA stability regulator CspE no data 62 97
o Dickeya dianthicola 67-19 HGI48_RS06165 transcription antiterminator/RNA stability regulator CspE no data 62 97
o Dickeya dianthicola ME23 DZA65_RS06510 transcription antiterminator/RNA stability regulator CspE insig. 62 97
o Rhodanobacter sp. FW510-T8 OKGIIK_07815 cspC cold-shock protein no data 61 99
o Klebsiella michiganensis M5al BWI76_RS07980 cold-shock protein no data 62 97
o Ralstonia sp. UNC404CL21Col ABZR87_RS16270 cold-shock protein strong 58 97
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02159 Cold shock-like protein CspJ no data 64 96
o Rahnella sp. WP5 EX31_RS23030 transcription antiterminator/RNA stability regulator CspE sig. 60 97
  Pectobacterium carotovorum WPP14 HER17_RS11355 transcription antiterminator/RNA stability regulator CspE cofit 63 97
o Castellaniella sp019104865 MT123 ABCV34_RS11730 cold-shock protein cofit 59 96
  Dickeya dianthicola 67-19 HGI48_RS19865 cold-shock protein no data 64 96
  Dickeya dianthicola ME23 DZA65_RS20940 cold-shock protein insig. 64 96
  Escherichia coli ECOR27 NOLOHH_18465 cspI cold shock protein CspI no data 64 96
  Escherichia coli ECOR38 HEPCGN_06365 cspI cold shock protein CspI no data 64 96
  Escherichia coli BW25113 b1552 cspI Qin prophage; cold shock protein (NCBI) no data 64 96
o Serratia liquefaciens MT49 IAI46_05870 transcription antiterminator/RNA stability regulator CspE insig. 60 97
  Dickeya dadantii 3937 DDA3937_RS19755 cold-shock protein insig. 64 96
  Dickeya dadantii 3937 DDA3937_RS11310 transcription antiterminator/RNA stability regulator CspE no data 63 97
  Dickeya dianthicola 67-19 HGI48_RS11345 transcription antiterminator/RNA stability regulator CspE no data 63 97
  Dickeya dianthicola ME23 DZA65_RS11690 transcription antiterminator/RNA stability regulator CspE insig. 63 97
o Paraburkholderia sabiae LMG 24235 QEN71_RS36275 cold-shock protein no data 55 100
  Burkholderia phytofirmans PsJN BPHYT_RS33480 cold-shock protein no data 58 100
  Serratia liquefaciens MT49 IAI46_14845 transcription antiterminator/RNA stability regulator CspE no data 62 97
  Rahnella sp. WP5 EX31_RS24665 transcription antiterminator/RNA stability regulator CspE insig. 62 97
  Escherichia coli BL21 ECD_01793 stress protein, member of the CspA-family cofit 62 97
  Escherichia fergusonii Becca EFB2_02177 Cold shock-like protein CspC insig. 62 97
  Escherichia coli ECOR27 NOLOHH_17020 cspE transcription antiterminator/RNA stability regulator CspE no data 62 97
  Escherichia coli ECOR38 HEPCGN_04895 cspE transcription antiterminator/RNA stability regulator CspE no data 62 97
  Escherichia coli ECRC101 OKFHMN_26495 cspE transcription antiterminator/RNA stability regulator CspE insig. 62 97
  Escherichia coli ECRC101 MCAODC_18910 cspE transcription antiterminator/RNA stability regulator CspE insig. 62 97
  Escherichia coli ECRC102 NIAGMN_01565 cspE transcription antiterminator/RNA stability regulator CspE no data 62 97
  Escherichia coli ECRC62 BNILDI_15800 cspE transcription antiterminator/RNA stability regulator CspE insig. 62 97
  Escherichia coli ECRC98 JDDGAC_01070 cspE transcription antiterminator/RNA stability regulator CspE no data 62 97
  Escherichia coli ECRC99 KEDOAH_01610 cspE transcription antiterminator/RNA stability regulator CspE no data 62 97
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01907 Cold shock-like protein CspC insig. 62 97
  Escherichia coli Nissle 1917 ECOLIN_RS10145 transcription antiterminator/RNA stability regulator CspE no data 62 97
  Enterobacter asburiae PDN3 EX28DRAFT_0735 Cold shock proteins no data 62 97
  Enterobacter sp. TBS_079 MPMX20_02729 Cold shock-like protein CspC strong 62 97
  Erwinia tracheiphila SCR3 LU632_RS13210 cspE transcription antiterminator/RNA stability regulator CspE strong 62 97
  Escherichia coli BW25113 b1823 cspC stress protein, member of the CspA-family (NCBI) strong 62 97
  Klebsiella michiganensis M5al BWI76_RS17930 cold-shock protein CspC sig. 62 97
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2838 Cold shock protein CspC insig. 62 97
  Pantoea sp. MT58 IAI47_08745 transcription antiterminator/RNA stability regulator CspE insig. 62 97
  Escherichia coli BL21 ECD_03406 RNA chaperone and antiterminator, cold-inducible no data 61 96