Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS12630 | | LysR family transcriptional regulator | strong | 100 | 100 |
o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01226 | | transcriptional regulator, LysR family | no data | 90 | 99 |
o | Paraburkholderia graminis OAS925 | ABIE53_005694 | | DNA-binding transcriptional LysR family regulator | strong | 89 | 99 |
o | Burkholderia phytofirmans PsJN | BPHYT_RS28230 | | LysR family transcriptional regulator | no data | 88 | 100 |
o | Pseudomonas fluorescens FW300-N2C3 | AO356_26165 | | LysR family transcriptional regulator | insig. | 45 | 97 |
o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5691 | | Chromosome initiation inhibitor | no data | 44 | 96 |
o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1106 | | Chromosome initiation inhibitor | insig. | 45 | 95 |
o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3928 | | Chromosome initiation inhibitor | sig. | 43 | 97 |
o | Pseudomonas putida KT2440 | PP_2833 | | Transcriptional regulator, LysR family | insig. | 38 | 96 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_28750 | | LysR family transcriptional regulator | no data | 39 | 96 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_27455 | | LysR family transcriptional regulator | insig. | 37 | 96 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1666 | | Transcriptional regulator, LysR family | strong | 39 | 93 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_861 | | Transcriptional regulator, LysR family | insig. | 37 | 96 |
o | Acidovorax sp. GW101-3H11 | Ac3H11_3526 | | Transcriptional regulator, LysR family | insig. | 37 | 92 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05435 | | DNA-binding transcriptional regulator, LysR family | sig. | 35 | 97 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS26875 | | LysR family transcriptional regulator | insig. | 35 | 94 |
| Variovorax sp. SCN45 | GFF5271 | | Transcriptional regulator, LysR family | insig. | 38 | 94 |
| Burkholderia phytofirmans PsJN | BPHYT_RS22720 | | LysR family transcriptional regulator | sig. | 38 | 93 |
| Paraburkholderia graminis OAS925 | ABIE53_004070 | | DNA-binding transcriptional LysR family regulator | strong | 38 | 94 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS05215 | | LysR family transcriptional regulator | strong | 36 | 92 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03221 | | DNA-binding transcriptional regulator, LysR family | insig. | 37 | 93 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS23080 | | LysR family transcriptional regulator | insig. | 36 | 93 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS19325 | | LysR family transcriptional regulator | strong | 34 | 93 |
| Paraburkholderia graminis OAS925 | ABIE53_001916 | | DNA-binding transcriptional LysR family regulator | sig. | 34 | 95 |
o | Variovorax sp. OAS795 | ABID97_RS09990 | | LysR family transcriptional regulator | insig. | 34 | 96 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS06875 | | LysR family transcriptional regulator | strong | 35 | 93 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.3077.1 | | Galactose-binding protein regulator | insig. | 36 | 94 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS31025 | | LysR family transcriptional regulator | insig. | 36 | 92 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02334 | | DNA-binding transcriptional regulator, LysR family | insig. | 34 | 96 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3376 | | Transcriptional regulator, LysR family | insig. | 35 | 88 |
| Paraburkholderia graminis OAS925 | ABIE53_000319 | | DNA-binding transcriptional LysR family regulator | sig. | 33 | 96 |
| Burkholderia phytofirmans PsJN | BPHYT_RS19705 | | LysR family transcriptional regulator | strong | 33 | 96 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS26660 | | LysR family transcriptional regulator | insig. | 35 | 96 |
| Burkholderia phytofirmans PsJN | BPHYT_RS28500 | | LysR family transcriptional regulator | no data | 35 | 92 |
| Pseudomonas putida KT2440 | PP_2649 | | Transcriptional regulator, LysR family | insig. | 35 | 93 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02950 | | DNA-binding transcriptional regulator, LysR family | insig. | 35 | 92 |
| Acidovorax sp. GW101-3H11 | Ac3H11_613 | | Galactose-binding protein regulator | strong | 32 | 92 |
| Variovorax sp. SCN45 | GFF5191 | | Galactose-binding protein regulator | insig. | 34 | 93 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS33955 | | LysR family transcriptional regulator | insig. | 35 | 93 |
| Castellaniella sp019104865 MT123 | ABCV34_RS07795 | | LysR family transcriptional regulator | insig. | 33 | 94 |
| Variovorax sp. OAS795 | ABID97_RS06825 | | LysR family transcriptional regulator | insig. | 34 | 93 |
| Azospirillum sp. SherDot2 | MPMX19_06223 | | HTH-type transcriptional regulator GbpR | insig. | 30 | 93 |
| Azospirillum brasilense Sp245 | AZOBR_RS31235 | | transcriptional regulator | insig. | 31 | 89 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS30525 | | LysR family transcriptional regulator | strong | 33 | 87 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF270 | | Transcriptional regulator, LysR family | insig. | 35 | 96 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1529 | | Putative transcriptional regulator | insig. | 33 | 88 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS04085 | | LysR family transcriptional regulator | insig. | 33 | 92 |
| Pseudomonas putida KT2440 | PP_2832 | | galactose-binding protein regulator | insig. | 34 | 87 |
| Variovorax sp. SCN45 | GFF2367 | | Transcriptional regulator, LysR family | cofit | 32 | 93 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS01515 | | LysR family transcriptional regulator | insig. | 33 | 92 |
| Escherichia coli ECRC101 | OKFHMN_23585 | lysR | transcriptional regulator | insig. | 29 | 92 |
| Escherichia coli ECRC101 | MCAODC_14635 | lysR | transcriptional regulator | insig. | 29 | 92 |
| Escherichia coli ECRC102 | NIAGMN_21350 | lysR | transcriptional regulator | insig. | 29 | 92 |
| Escherichia coli ECRC98 | JDDGAC_27540 | lysR | transcriptional regulator | no data | 29 | 92 |
| Escherichia coli ECRC99 | KEDOAH_04600 | lysR | transcriptional regulator | no data | 29 | 92 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS30410 | | LysR family transcriptional regulator | strong | 32 | 89 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS00725 | | LysR family transcriptional regulator | strong | 34 | 88 |
| Castellaniella sp019104865 MT123 | ABCV34_RS03730 | | LysR substrate-binding domain-containing protein | insig. | 33 | 87 |
| Variovorax sp. OAS795 | ABID97_RS01380 | | LysR substrate-binding domain-containing protein | insig. | 33 | 86 |
| Escherichia coli ECRC62 | BNILDI_14075 | lysR | transcriptional regulator | insig. | 28 | 92 |
| Rhizobium sp. OAE497 | ABIE40_RS26220 | | LysR family transcriptional regulator | insig. | 31 | 93 |
| Variovorax sp. SCN45 | GFF4149 | | hypothetical protein | insig. | 30 | 92 |
| Klebsiella michiganensis M5al | BWI76_RS19595 | | hypothetical protein | insig. | 28 | 94 |
| Pseudomonas putida KT2440 | PP_2539 | | Transcriptional regulator, LysR family | insig. | 33 | 89 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2615 | | LysR family transcriptional regulator YdcI | insig. | 30 | 92 |
| Serratia liquefaciens MT49 | IAI46_05785 | | LysR family transcriptional regulator | insig. | 29 | 93 |
| Klebsiella michiganensis M5al | BWI76_RS13280 | | LysR family transcriptional regulator | strong | 29 | 92 |
| Enterobacter sp. TBS_079 | MPMX20_02212 | | HTH-type transcriptional regulator GbpR | strong | 32 | 92 |
| Escherichia fergusonii Becca | EFB2_02558 | | HTH-type transcriptional regulator CatM | insig. | 29 | 92 |
| Escherichia coli Nissle 1917 | ECOLIN_RS08220 | | LysR substrate-binding domain-containing protein | no data | 29 | 92 |
| Enterobacter asburiae PDN3 | EX28DRAFT_1254 | | Transcriptional regulator | cofit | 31 | 92 |
| Escherichia coli ECRC101 | OKFHMN_01655 | ydcI | Uncharacterized HTH-type transcriptional regulator YdcI | insig. | 28 | 92 |
| Escherichia coli ECRC101 | MCAODC_16280 | ydcI | Uncharacterized HTH-type transcriptional regulator YdcI | insig. | 28 | 92 |
| Escherichia coli ECRC102 | NIAGMN_25790 | ydcI | Uncharacterized HTH-type transcriptional regulator YdcI | insig. | 28 | 92 |
| Escherichia coli ECRC98 | JDDGAC_04145 | ydcI | Uncharacterized HTH-type transcriptional regulator YdcI | no data | 28 | 92 |
| Escherichia coli ECRC99 | KEDOAH_26785 | ydcI | Uncharacterized HTH-type transcriptional regulator YdcI | no data | 28 | 92 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3798 | | Putative transcriptional regulator | insig. | 28 | 92 |
| Rhizobium sp. OAE497 | ABIE40_RS13945 | | LysR family transcriptional regulator | sig. | 28 | 92 |
| Escherichia coli ECOR27 | NOLOHH_19335 | ydcI | Uncharacterized HTH-type transcriptional regulator YdcI | no data | 28 | 92 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_02293 | | HTH-type transcriptional regulator CatM | insig. | 29 | 92 |
| Escherichia coli ECOR38 | HEPCGN_26160 | ydcI | Uncharacterized HTH-type transcriptional regulator YdcI | cofit | 28 | 92 |
| Escherichia coli ECRC62 | BNILDI_17790 | ydcI | Uncharacterized HTH-type transcriptional regulator YdcI | insig. | 28 | 92 |
| Escherichia coli BL21 | ECD_01379 | | putative DNA-binding transcriptional regulator | insig. | 28 | 92 |
| Escherichia coli BW25113 | b1422 | ydcI | putative transcriptional regulator LYSR-type (VIMSS) | strong | 28 | 92 |
| Azospirillum brasilense Sp245 | AZOBR_RS28155 | | transcriptional regulator LysR family protein | no data | 31 | 89 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS31295 | | LysR substrate-binding domain-containing protein | insig. | 30 | 94 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS05115 | | LysR family transcriptional regulator | insig. | 31 | 87 |
| Sinorhizobium meliloti 1021 | SM_b20896 | | LysR family transcriptional regulator | strong | 29 | 92 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS31320 | | LysR substrate-binding domain-containing protein | insig. | 32 | 76 |
| Burkholderia phytofirmans PsJN | BPHYT_RS07230 | | LysR family transcriptional regulator | insig. | 29 | 94 |
| Variovorax sp. SCN45 | GFF750 | | Transcriptional regulator LigR, LysR family | insig. | 30 | 90 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS00565 | | pca operon transcription factor PcaQ | insig. | 32 | 94 |
| Ralstonia solanacearum UW163 | UW163_RS13895 | | pca operon transcription factor PcaQ | insig. | 32 | 94 |
| Ralstonia solanacearum PSI07 | RPSI07_RS16935 | | LysR family transcriptional regulator | insig. | 33 | 94 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS12080 | | pca operon transcription factor PcaQ | strong | 32 | 95 |
| Sinorhizobium meliloti 1021 | SM_b20580 | | LysR family transcriptional regulator | insig. | 28 | 92 |
| Ralstonia solanacearum GMI1000 | RS_RS07250 | | pca operon transcription factor PcaQ | insig. | 33 | 94 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.4253.1 | | Transcriptional regulator, LysR family | insig. | 30 | 93 |
| Acidovorax sp. GW101-3H11 | Ac3H11_3294 | | Chromosome initiation inhibitor | insig. | 31 | 92 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS32070 | | LysR family transcriptional regulator | cofit | 30 | 94 |