| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Azospirillum sp. SherDot2 | MPMX19_05238 | | Periplasmic dipeptide transport protein | insig. | 100 | 100 |
| | Azospirillum sp. SherDot2 | MPMX19_04419 | | Periplasmic dipeptide transport protein | cofit | 52 | 94 |
| | Azospirillum brasilense Sp245 | AZOBR_RS21760 | | peptide ABC transporter substrate-binding protein | strong | 52 | 94 |
| | Azospirillum brasilense Sp245 | AZOBR_RS29500 | | peptide ABC transporter substrate-binding protein | insig. | 50 | 94 |
| | Variovorax sp. SCN45 | GFF7288 | | Dipeptide ABC transporter, substrate-binding protein DppA (TC 3.A.1.5.2) | insig. | 47 | 98 |
| | Variovorax sp. OAS795 | ABID97_RS04470 | | ABC transporter substrate-binding protein | insig. | 48 | 94 |
| | Escherichia fergusonii Becca | EFB2_00263 | | Periplasmic dipeptide transport protein | insig. | 47 | 98 |
| | Escherichia coli ECOR38 | HEPCGN_14960 | dppA | dipeptide ABC transporter substrate-binding protein DppA | insig. | 47 | 98 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS20280 | | dipeptide ABC transporter substrate-binding protein DppA | insig. | 47 | 98 |
| | Escherichia coli BL21 | ECD_03395 | | dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor | insig. | 47 | 98 |
| | Escherichia coli ECOR27 | NOLOHH_08040 | dppA | dipeptide ABC transporter substrate-binding protein DppA | insig. | 47 | 98 |
| | Escherichia coli ECRC62 | BNILDI_03520 | dppA | dipeptide ABC transporter substrate-binding protein DppA | insig. | 47 | 98 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_00162 | | Periplasmic dipeptide transport protein | insig. | 47 | 98 |
| | Escherichia coli BW25113 | b3544 | dppA | dipeptide transporter (NCBI) | sig. | 47 | 98 |
| | Serratia liquefaciens MT49 | IAI46_00475 | | ABC transporter substrate-binding protein | cofit | 46 | 96 |
| | Escherichia coli ECRC100 | OKFHMN_16100 | dppA | dipeptide ABC transporter substrate-binding protein DppA | insig. | 47 | 98 |
| | Escherichia coli ECRC101 | MCAODC_06615 | dppA | dipeptide ABC transporter substrate-binding protein DppA | insig. | 47 | 98 |
| | Escherichia coli ECRC102 | NIAGMN_13860 | dppA | dipeptide ABC transporter substrate-binding protein DppA | cofit | 47 | 98 |
| | Escherichia coli ECRC98 | JDDGAC_19730 | dppA | dipeptide ABC transporter substrate-binding protein DppA | insig. | 47 | 98 |
| | Escherichia coli ECRC99 | KEDOAH_12050 | dppA | dipeptide ABC transporter substrate-binding protein DppA | no data | 47 | 98 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_07610 | | Dipeptide-binding protein | insig. | 46 | 98 |
| | Rahnella sp. WP5 | EX31_RS05515 | | ABC transporter substrate-binding protein | insig. | 46 | 98 |
| | Klebsiella michiganensis M5al | BWI76_RS26885 | | ABC transporter substrate-binding protein | sig. | 46 | 98 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF475 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | insig. | 47 | 96 |
| | Dickeya dianthicola 67-19 | HGI48_RS20925 | | ABC transporter substrate-binding protein | cofit | 46 | 96 |
| | Dickeya dadantii 3937 | DDA3937_RS00460 | | ABC transporter substrate-binding protein | cofit | 46 | 96 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_10080 | | ABC transporter substrate-binding protein | insig. | 46 | 98 |
| | Dickeya dianthicola ME23 | DZA65_RS21920 | | ABC transporter substrate-binding protein | insig. | 46 | 96 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_3804 | | ABC-type dipeptide transport system, periplasmic component | cofit | 46 | 98 |
| | Pantoea sp. MT58 | IAI47_18650 | | ABC transporter substrate-binding protein | strong | 45 | 98 |
| | Erwinia tracheiphila SCR3 | LU632_RS00265 | | ABC transporter substrate-binding protein | insig. | 45 | 98 |
| | Sinorhizobium meliloti 1021 | SMc00786 | | periplasmic dipeptide-binding protein | strong | 46 | 99 |
| | Enterobacter sp. TBS_079 | MPMX20_00190 | | Periplasmic dipeptide transport protein | sig. | 45 | 98 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS15685 | | ABC transporter substrate-binding protein | cofit | 44 | 98 |
| | Pectobacterium carotovorum WPP14 | HER17_RS00220 | | ABC transporter substrate-binding protein | cofit | 45 | 96 |
| | Serratia liquefaciens MT49 | IAI46_18375 | | ABC transporter substrate-binding protein | insig. | 47 | 99 |
| | Erwinia amylovora T8 | OLJFJH_04875 | | ABC transporter substrate-binding protein | insig. | 45 | 98 |
| | Rhodospirillum rubrum S1H | Rru_A2356 | | extracellular solute-binding protein, family 5 (NCBI) | cofit | 47 | 98 |
| | Agrobacterium fabrum C58 | Atu4113 | | dipeptide ABC transporter substrate-binding protein | sig. | 46 | 99 |
| | Erwinia amylovora T8 | OLJFJH_13985 | | ABC transporter substrate-binding protein | insig. | 46 | 96 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS06520 | | ABC transporter substrate-binding protein | cofit | 46 | 99 |
| | Dickeya dadantii 3937 | DDA3937_RS08710 | | ABC transporter substrate-binding protein | insig. | 47 | 94 |
| | Enterobacter sp. TBS_079 | MPMX20_02238 | | Periplasmic dipeptide transport protein | insig. | 45 | 95 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_1228 | | ABC-type dipeptide transport system, periplasmic component | insig. | 45 | 94 |
| | Pantoea sp. MT58 | IAI47_09645 | | ABC transporter substrate-binding protein | insig. | 46 | 99 |
| | Pectobacterium carotovorum WPP14 | HER17_RS13305 | | ABC transporter substrate-binding protein | cofit | 46 | 94 |
| | Rhizobium sp. OAE497 | ABIE40_RS03345 | | ABC transporter substrate-binding protein | insig. | 44 | 96 |
| | Rahnella sp. WP5 | EX31_RS19535 | | ABC transporter substrate-binding protein | insig. | 45 | 96 |
| | Rhizobium sp. OAE497 | ABIE40_RS22525 | | ABC transporter substrate-binding protein | insig. | 46 | 92 |
| | Pseudomonas simiae WCS417 | PS417_04085 | | peptide ABC transporter substrate-binding protein | insig. | 45 | 94 |
| | Dickeya dianthicola 67-19 | HGI48_RS08805 | | ABC transporter substrate-binding protein | insig. | 45 | 93 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_05370 | | peptide ABC transporter substrate-binding protein | insig. | 45 | 94 |
| | Dickeya dianthicola ME23 | DZA65_RS09110 | | ABC transporter substrate-binding protein | insig. | 45 | 93 |
| | Pseudomonas orientalis W4I3 | QF045_RS07080 | | ABC transporter substrate-binding protein | cofit | 44 | 94 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01021 | | Periplasmic dipeptide transport protein | cofit | 44 | 96 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS04125 | | ABC transporter substrate-binding protein | insig. | 45 | 96 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS04125 | | ABC transporter substrate-binding protein | insig. | 45 | 96 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3306 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | strong | 45 | 95 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_07235 | | peptide ABC transporter substrate-binding protein | sig. | 45 | 94 |
| | Klebsiella michiganensis M5al | BWI76_RS13340 | | peptide ABC transporter substrate-binding protein | insig. | 44 | 94 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1119 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | insig. | 46 | 93 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_1036 | | ABC-type dipeptide transport system, periplasmic component | cofit | 44 | 93 |
| | Pseudomonas sp. RS175 | PFR28_00132 | | Periplasmic dipeptide transport protein | insig. | 45 | 93 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS56455 | | ABC transporter substrate-binding protein | insig. | 44 | 94 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS23995 | | ABC transporter substrate-binding protein | insig. | 45 | 91 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_01600 | | Di/tripeptide-binding protein 1 | insig. | 44 | 94 |
| | Enterobacter sp. TBS_079 | MPMX20_02415 | | Periplasmic dipeptide transport protein | insig. | 43 | 95 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_4234 | | extracellular solute-binding protein, family 5 | insig. | 44 | 94 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_4234 | | extracellular solute-binding protein, family 5 | insig. | 44 | 94 |
| | Pseudomonas sp. S08-1 | OH686_08695 | | Dipeptide ABC transporter, substrate-binding protein DppA | cofit | 43 | 93 |
| | Pseudomonas segetis P6 | MPMX49_03884 | | Periplasmic dipeptide transport protein | cofit | 43 | 96 |
| | Serratia liquefaciens MT49 | IAI46_04450 | | ABC transporter substrate-binding protein | insig. | 44 | 95 |
| | Pseudomonas putida KT2440 | PP_0885 | | dipeptide ABC transporter - periplasmic binding protein | insig. | 42 | 96 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS23960 | | ABC transporter substrate-binding protein | insig. | 44 | 94 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_01570 | | Di/tripeptide-binding protein 4 | insig. | 44 | 94 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS56425 | | ABC transporter substrate-binding protein | insig. | 44 | 94 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_01580 | | Di/tripeptide-binding protein 3 | strong | 43 | 94 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS28710 | | ABC transporter substrate-binding protein | cofit | 43 | 93 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS23975 | | ABC transporter substrate-binding protein | insig. | 43 | 94 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS56435 | | ABC transporter substrate-binding protein | insig. | 43 | 94 |
| | Pseudomonas sp. BP01 | JOY50_RS10980 | | ABC transporter substrate-binding protein | insig. | 42 | 96 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS11780 | | ABC transporter substrate-binding protein | insig. | 43 | 94 |
| | Klebsiella michiganensis M5al | BWI76_RS13460 | | ABC transporter substrate-binding protein | insig. | 43 | 94 |
| | Pseudomonas sp. SVBP6 | COO64_RS04120 | | ABC transporter substrate-binding protein | insig. | 42 | 96 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_23050 | | ABC transporter substrate-binding protein | insig. | 42 | 94 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05802 | | dipeptide transport system substrate-binding protein | cofit | 42 | 91 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS28705 | | ABC transporter substrate-binding protein | cofit | 42 | 95 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02084 | | dipeptide transport system substrate-binding protein | insig. | 41 | 96 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS04115 | | ABC transporter substrate-binding protein | insig. | 43 | 97 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS04115 | | ABC transporter substrate-binding protein | insig. | 43 | 97 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS18690 | | ABC transporter | insig. | 42 | 92 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_4238 | | extracellular solute-binding protein, family 5 | insig. | 43 | 92 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_4238 | | extracellular solute-binding protein, family 5 | insig. | 43 | 92 |
| | Paraburkholderia graminis OAS925 | ABIE53_000595 | | dipeptide transport system substrate-binding protein | insig. | 41 | 97 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS18695 | | ABC transporter | insig. | 41 | 94 |
| | Pseudomonas simiae WCS417 | PS417_04075 | | peptide ABC transporter substrate-binding protein | strong | 42 | 96 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS02265 | | peptide ABC transporter substrate-binding protein | insig. | 41 | 97 |
| | Paraburkholderia graminis OAS925 | ABIE53_003951 | | dipeptide transport system substrate-binding protein | insig. | 42 | 99 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_01595 | | Di/tripeptide-binding protein 2 | insig. | 42 | 94 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_4236 | | extracellular solute-binding protein, family 5 | insig. | 42 | 98 |