Homologs of MMP_RS07165 from Methanococcus maripaludis S2

RNA-splicing ligase RtcB
SEED: RNA-2',3'-PO4:RNA-5'-OH ligase

73 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Methanococcus maripaludis S2 MMP_RS07165 RNA-splicing ligase RtcB no data 100 100
o Methanococcus maripaludis JJ MMJJ_RS07190 RtcB family protein strong 98 100
o Mycobacterium tuberculosis H37Rv Rv2631 Conserved hypothetical protein insig. 50 91
o Bacteroides ovatus ATCC 8483 BACOVA_02429 hypothetical protein insig. 31 95
o Cupriavidus basilensis FW507-4G11 RR42_RS23340 RNA ligase insig. 33 86
o Variovorax sp. OAS795 ABID97_RS05650 RtcB family protein insig. 29 86
o Pectobacterium carotovorum WPP14 HER17_RS03350 RtcB family protein insig. 31 92
  Variovorax sp. OAS795 ABID97_RS24130 RtcB family protein insig. 32 88
o Acidovorax sp. GW101-3H11 Ac3H11_1977 Protein RtcB insig. 31 87
o Escherichia coli ECOR38 HEPCGN_15770 rtcB RNA-splicing ligase RtcB insig. 31 87
o Variovorax sp. SCN45 GFF2252 RNA-2',3'-PO4:RNA-5'-OH ligase sig. 32 87
o Escherichia coli ECOR27 NOLOHH_08745 rtcB RNA-splicing ligase RtcB insig. 31 87
o Escherichia fergusonii Becca EFB2_00408 RNA-splicing ligase RtcB insig. 31 87
o Escherichia coli BW25113 b3421 rtcB hypothetical protein (NCBI) insig. 31 87
o Escherichia coli ECRC100 OKFHMN_16950 rtcB RNA-splicing ligase RtcB cofit 31 87
o Escherichia coli ECRC101 MCAODC_07480 rtcB RNA-splicing ligase RtcB insig. 31 87
o Escherichia coli ECRC102 NIAGMN_14720 rtcB RNA-splicing ligase RtcB insig. 31 87
o Escherichia coli ECRC99 KEDOAH_11190 rtcB RNA-splicing ligase RtcB no data 31 87
o Escherichia coli ECRC62 BNILDI_02770 rtcB RNA-splicing ligase RtcB cofit 31 87
o Ralstonia solanacearum GMI1000 RS_RS01110 RtcB family protein insig. 32 87
o Ralstonia solanacearum PSI07 RPSI07_RS23040 RtcB family protein insig. 32 87
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF595 'RNA-2',3'-PO4:RNA-5'-OH ligase' transl_table=11 insig. 31 87
o Pseudomonas aeruginosa PA14 IKLFDK_00600 RNA-splicing ligase RtcB sig. 31 87
o Escherichia coli Nissle 1917 ECOLIN_RS19530 RNA-splicing ligase RtcB insig. 31 87
o Escherichia coli BL21 ECD_03272 RNA-splicing ligase insig. 31 87
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00283 RNA-splicing ligase RtcB insig. 31 87
o Pseudomonas sp. RS175 PFR28_01832 RNA-splicing ligase RtcB insig. 31 87
o Pseudomonas aeruginosa PUPa3 DQ20_RS55985 RtcB family protein strong 31 87
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5793 Protein RtcB insig. 31 87
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS10305 RtcB family protein insig. 31 87
o Ralstonia solanacearum UW163 UW163_RS03275 RtcB family protein insig. 31 87
o Pseudomonas sp. DMC3 GFF919 RNA-splicing ligase RtcB cofit 31 87
o Pseudomonas aeruginosa MRSN321 DY961_RS23520 RtcB family protein cofit 31 88
o Ralstonia sp. UNC404CL21Col ABZR87_RS05940 RtcB family protein insig. 31 87
  Pectobacterium carotovorum WPP14 HER17_RS19320 RtcB family protein insig. 29 87
o Pseudomonas sp. S08-1 OH686_16250 RNA-2',3'-PO4:RNA-5'-OH ligase insig. 31 86
o Pseudomonas sp. BP01 JOY50_RS20045 RtcB family protein insig. 31 87
o Pseudomonas sp. SVBP6 COO64_RS15780 RtcB family protein cofit 31 87
  Escherichia coli ECOR38 HEPCGN_01325 RNA-splicing ligase RtcB insig. 28 92
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4930.1 RNA-2',3'-PO4:RNA-5'-OH ligase insig. 30 87
o Acinetobacter baumannii LAC-4 RR41_RS03285 RtcB family protein insig. 29 88
o Lysobacter sp. OAE881 ABIE51_RS18530 RtcB family protein insig. 29 87
o Pseudomonas lactucae CFBP13502 GEMAOFIL_02524 RNA-splicing ligase RtcB cofit 29 87
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS08805 RtcB family protein no data 30 87
o Escherichia coli ECRC98 JDDGAC_20580 rtcB RNA-splicing ligase RtcB insig. 29 87
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS05315 RtcB family protein insig. 31 89
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS09560 RtcB family protein insig. 31 87
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS20225 RNA ligase RtcB family protein sig. 28 91
  Ralstonia solanacearum UW163 UW163_RS18950 RNA ligase RtcB family protein insig. 28 91
o Desulfovibrio vulgaris Hildenborough JW710 DVU0853 conserved hypothetical protein (TIGR) insig. 30 93
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS11270 RtcB family protein insig. 31 85
  Escherichia coli Nissle 1917 ECOLIN_RS01790 RNA ligase RtcB family protein insig. 29 93
  Pectobacterium carotovorum WPP14 HER17_RS03875 RNA ligase RtcB family protein insig. 27 92
  Bacteroides ovatus ATCC 8483 BACOVA_04144 hypothetical protein insig. 29 87
  Escherichia coli ECOR27 NOLOHH_02085 rtcB RNA ligase RtcB family protein insig. 29 93
  Ralstonia sp. UNC404CL21Col ABZR87_RS20790 RNA ligase RtcB family protein insig. 29 91
  Escherichia coli ECRC62 BNILDI_00280 rtcB RNA ligase RtcB family protein cofit 29 93
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03405 RNA-splicing ligase RtcB insig. 29 93
  Bacteroides thetaiotaomicron VPI-5482 BT1455 protein rtcB (NCBI ptt file) sig. 29 87
  Pseudomonas aeruginosa PA14 IKLFDK_26060 RNA ligase RtcB family protein no data 29 90
  Escherichia fergusonii Becca EFB2_03785 RNA-splicing ligase RtcB insig. 28 93
  Escherichia coli ECOR38 HEPCGN_07815 rtcB RNA ligase RtcB family protein insig. 28 93
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS18465 RNA-splicing ligase RtcB insig. 30 86
  Pseudomonas aeruginosa MRSN321 DY961_RS25645 RNA ligase RtcB family protein no data 29 90
  Pseudomonas aeruginosa PUPa3 DQ20_RS58090 RNA ligase RtcB family protein no data 29 90
  Ralstonia solanacearum GMI1000 RS_RS20480 RNA ligase RtcB family protein insig. 27 91
  Ralstonia solanacearum PSI07 RPSI07_RS02635 RNA ligase RtcB family protein strong 28 91
o Desulfovibrio vulgaris Miyazaki F DvMF_2898 protein of unknown function UPF0027 (RefSeq) insig. 25 93
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4105 Protein with similarity to RtcB insig. 29 78
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS10275 RNA-splicing ligase RtcB strong 23 90
o Phocaeicola dorei CL03T12C01 ABI39_RS19560 RNA-splicing ligase RtcB insig. 24 83
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS07935 hypothetical protein insig. 26 40
  Ralstonia solanacearum UW163 UW163_RS05690 hypothetical protein insig. 26 40