Homologs of LRK53_RS01980 from Rhodanobacter sp000427505 FW510-R12

very short patch repair endonuclease
SEED: Very-short-patch mismatch repair endonuclease (G-T specific)
KEGG: DNA mismatch endonuclease, patch repair protein

53 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS01980 very short patch repair endonuclease insig. 100 100
o Sinorhizobium meliloti 1021 SMc03764 DNA mismatch endonuclease, patch repair protein insig. 40 91
o Ralstonia solanacearum GMI1000 RS_RS25190 very short patch repair endonuclease insig. 38 97
  Bacteroides ovatus ATCC 8483 BACOVA_01559 DNA mismatch endonuclease Vsr insig. 42 79
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS00270 very short patch repair endonuclease cofit 41 88
  Paraburkholderia sabiae LMG 24235 QEN71_RS24755 very short patch repair endonuclease insig. 42 79
  Variovorax sp. OAS795 ABID97_RS21815 very short patch repair endonuclease insig. 44 79
  Paraburkholderia sabiae LMG 24235 QEN71_RS35525 very short patch repair endonuclease insig. 41 80
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00247 T/G mismatch-specific endonuclease no data 42 79
  Ralstonia solanacearum PSI07 RPSI07_RS24830 very short patch repair endonuclease insig. 37 86
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS20205 very short patch repair endonuclease insig. 37 80
  Paraburkholderia graminis OAS925 ABIE53_001371 DNA mismatch endonuclease (patch repair protein) sig. 41 79
o Rhizobium sp. OAE497 ABIE40_RS00720 very short patch repair endonuclease insig. 35 90
o Lysobacter sp. OAE881 ABIE51_RS12405 very short patch repair endonuclease insig. 38 95
  Shewanella amazonensis SB2B Sama_0282 putative DNA mismatch endonuclease protein (RefSeq) insig. 37 79
  Burkholderia phytofirmans PsJN BPHYT_RS05605 DNA glycosylase no data 42 79
  Dickeya dianthicola 67-19 HGI48_RS13990 DNA mismatch endonuclease Vsr insig. 41 80
  Lysobacter sp. OAE881 ABIE51_RS18765 DNA mismatch endonuclease Vsr insig. 39 89
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1027 DNA mismatch endonuclease Vsr insig. 40 80
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_18475 very short patch repair endonuclease insig. 40 79
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2598 T/G mismatch-specific endonuclease (EC 3.1.-.-) insig. 40 81
  Bifidobacterium breve UCC2003 BBR_RS17975 very short patch repair endonuclease insig. 38 80
  Castellaniella sp019104865 MT123 ABCV34_RS12345 very short patch repair endonuclease insig. 40 79
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS01815 DNA mismatch endonuclease Vsr cofit 41 83
  Desulfovibrio vulgaris Hildenborough JW710 DVU2843 vsr DNA mismatch endonuclease Vsr, putative (TIGR) insig. 35 79
  Rhodanobacter denitrificans MT42 LRK55_RS09040 very short patch repair endonuclease insig. 39 79
  Rhodopseudomonas palustris CGA009 TX73_001815 very short patch repair endonuclease insig. 39 81
o Caulobacter crescentus NA1000 CCNA_03739 very short patch repair endonuclease insig. 33 98
o Caulobacter crescentus NA1000 Δfur CCNA_03739 very short patch repair endonuclease insig. 33 98
o Erwinia amylovora T8 OLJFJH_12490 very short patch repair endonuclease insig. 33 100
  Dickeya dianthicola ME23 DZA65_RS02215 DNA mismatch endonuclease Vsr no data 32 79
o Escherichia fergusonii Becca EFB2_01987 Very short patch repair protein insig. 31 98
o Escherichia coli ECOR38 HEPCGN_03965 vsr VSPR family DNA mismatch endonuclease insig. 31 98
o Escherichia coli ECRC62 BNILDI_15025 vsr VSPR family DNA mismatch endonuclease cofit 31 98
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01768 Very short patch repair protein insig. 30 98
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS01825 DNA mismatch endonuclease Vsr cofit 33 79
  Pantoea sp. MT58 IAI47_07915 DNA mismatch endonuclease Vsr insig. 33 79
  Klebsiella pneumoniae MKP103 KDGMDA_25680 very short patch repair endonuclease insig. 31 70
o Escherichia coli ECOR27 NOLOHH_16235 vsr VSPR family DNA mismatch endonuclease insig. 30 98
o Escherichia coli BW25113 b1960 vsr DNA mismatch endonuclease of very short patch repair (NCBI) sig. 30 98
  Escherichia coli ECRC102 NIAGMN_02450 vsr VSPR family DNA mismatch endonuclease no data 33 79
  Escherichia coli ECRC100 OKFHMN_25605 vsr VSPR family DNA mismatch endonuclease cofit 33 79
  Escherichia coli ECRC101 MCAODC_19790 vsr VSPR family DNA mismatch endonuclease insig. 33 79
  Escherichia coli ECRC98 JDDGAC_00190 vsr VSPR family DNA mismatch endonuclease insig. 33 79
  Escherichia coli ECRC99 KEDOAH_02490 vsr VSPR family DNA mismatch endonuclease no data 33 79
o Escherichia coli Nissle 1917 ECOLIN_RS11145 VSPR family DNA mismatch endonuclease no data 30 98
  Erwinia tracheiphila SCR3 LU632_RS14130 vsr DNA mismatch endonuclease Vsr insig. 31 79
  Klebsiella michiganensis M5al BWI76_RS18415 very short patch repair endonuclease insig. 32 79
  Enterobacter sp. TBS_079 MPMX20_02956 Very short patch repair protein sig. 30 79
  Rhodanobacter denitrificans MT42 LRK55_RS09000 hypothetical protein insig. 38 39
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_21550 vsr very short patch repair endonuclease cofit 30 79
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3997 Very-short-patch mismatch repair endonuclease (G-T specific) insig. 29 100
  Enterobacter asburiae PDN3 EX28DRAFT_0594 T/G mismatch-specific endonuclease (EC 3.1.-.-) insig. 30 79