Homologs of IAI46_05830 from Serratia liquefaciens MT49

cold shock domain-containing protein
SEED: Putative cold-shock protein

65 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Serratia liquefaciens MT49 IAI46_05830 cold shock domain-containing protein insig. 100 100
o Rahnella sp. WP5 EX31_RS03135 cold shock domain-containing protein insig. 72 100
o Pantoea sp. MT58 IAI47_04615 cold shock domain-containing protein insig. 69 100
o Pectobacterium carotovorum WPP14 HER17_RS13810 cold shock domain-containing protein insig. 66 99
o Klebsiella michiganensis M5al BWI76_RS15460 cold-shock protein insig. 67 99
o Enterobacter sp. TBS_079 MPMX20_01226 hypothetical protein insig. 65 99
o Enterobacter asburiae PDN3 EX28DRAFT_2400 Cold shock proteins insig. 65 99
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS15105 cold-shock protein insig. 46 36
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS11580 cold-shock protein no data 43 40
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3498.1 hypothetical protein strong 39 39
  Bifidobacterium breve UCC2003 BBR_RS17445 cold shock domain-containing protein no data 31 44
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4536 Cold shock protein CspE no data 39 40
  Escherichia coli BL21 ECD_00593 constitutive cold shock family transcription antitermination protein; negative regulator of cspA transcription; RNA melting protein; ssDNA-binding protein insig. 39 40
  Escherichia fergusonii Becca EFB2_03468 Cold shock-like protein CspE insig. 39 40
  Escherichia coli ECOR27 NOLOHH_23795 cspE transcription antiterminator/RNA stability regulator CspE insig. 39 40
  Escherichia coli ECOR38 HEPCGN_00855 cspE transcription antiterminator/RNA stability regulator CspE cofit 39 40
  Escherichia coli ECRC101 OKFHMN_07420 cspE transcription antiterminator/RNA stability regulator CspE strong 39 40
  Escherichia coli ECRC101 MCAODC_26635 cspE transcription antiterminator/RNA stability regulator CspE sig. 39 40
  Escherichia coli ECRC102 NIAGMN_05475 cspE transcription antiterminator/RNA stability regulator CspE sig. 39 40
  Escherichia coli ECRC62 BNILDI_21805 cspE transcription antiterminator/RNA stability regulator CspE insig. 39 40
  Escherichia coli ECRC98 JDDGAC_11065 cspE transcription antiterminator/RNA stability regulator CspE no data 39 40
  Escherichia coli ECRC99 KEDOAH_20550 cspE transcription antiterminator/RNA stability regulator CspE no data 39 40
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03082 Cold shock-like protein CspE strong 39 40
  Escherichia coli Nissle 1917 ECOLIN_RS03400 transcription antiterminator/RNA stability regulator CspE cofit 39 40
  Escherichia coli BW25113 b0623 cspE cold shock protein E (NCBI) strong 39 40
  Erwinia tracheiphila SCR3 LU632_RS16440 cspE transcription antiterminator/RNA stability regulator CspE no data 38 40
  Lysobacter sp. OAE881 ABIE51_RS12600 cold-shock protein insig. 40 38
  Enterobacter asburiae PDN3 EX28DRAFT_2340 Cold shock proteins no data 39 40
  Enterobacter sp. TBS_079 MPMX20_01283 Cold shock-like protein CspE sig. 39 40
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5429 hypothetical protein insig. 35 35
  Serratia liquefaciens MT49 IAI46_05870 transcription antiterminator/RNA stability regulator CspE insig. 40 36
  Rahnella sp. WP5 EX31_RS23030 transcription antiterminator/RNA stability regulator CspE sig. 40 36
  Pseudomonas sp. S08-1 OH686_17410 Cold shock protein of CSP family no data 36 39
  Klebsiella michiganensis M5al BWI76_RS07980 cold-shock protein no data 40 36
  Fusobacterium nucleatum SB010 HUW76_07435 cold-shock protein strong 37 36
  Vibrio cholerae E7946 ATCC 55056 CSW01_14910 cold-shock protein insig. 37 40
  Dickeya dadantii 3937 DDA3937_RS06115 transcription antiterminator/RNA stability regulator CspE no data 38 36
  Dickeya dianthicola 67-19 HGI48_RS06165 transcription antiterminator/RNA stability regulator CspE no data 38 36
  Dickeya dianthicola ME23 DZA65_RS06510 transcription antiterminator/RNA stability regulator CspE insig. 38 36
  Pantoea sp. MT58 IAI47_14075 transcription antiterminator/RNA stability regulator CspE sig. 38 36
  Pectobacterium carotovorum WPP14 HER17_RS15290 transcription antiterminator/RNA stability regulator CspE cofit 36 40
  Lysobacter sp. OAE881 ABIE51_RS18590 cold-shock protein no data 35 38
  Rhizobium sp. OAE497 ABIE40_RS29240 cold-shock protein insig. 37 32
  Enterobacter asburiae PDN3 EX28DRAFT_2409 Cold shock proteins no data 36 40
  Rahnella sp. WP5 EX31_RS10935 transcription antiterminator/RNA stability regulator CspE cofit 38 36
  Pseudomonas putida KT2440 PP_0636 Cold shock DNA-binding domain protein insig. 35 38
  Pseudomonas putida KT2440 PP_1099 Cold shock protein CapB strong 33 38
  Pseudomonas stutzeri RCH2 Psest_3045 Cold shock proteins sig. 33 38
  Pseudomonas fluorescens SBW25 PFLU_RS06435 cold-shock protein no data 33 38
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06435 cold-shock protein no data 33 38
  Pseudomonas syringae pv. syringae B728a Psyr_3884 cold-shock DNA-binding protein family no data 33 38
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3884 cold-shock DNA-binding protein family no data 33 38
  Pseudomonas simiae WCS417 PS417_06370 cold-shock protein strong 33 38
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4642 Cold shock protein CspA insig. 33 38
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3171 Cold shock protein CspA no data 33 38
  Pseudomonas fluorescens FW300-N2E3 AO353_16935 cold-shock protein no data 33 38
  Pseudomonas fluorescens FW300-N2C3 AO356_05540 cold-shock protein sig. 33 38
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2967 Cold shock protein CspA strong 33 38
  Herbaspirillum seropedicae SmR1 HSERO_RS15195 cold-shock protein no data 41 35
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS18735 cold-shock protein insig. 41 35
  Ralstonia solanacearum GMI1000 RS_RS22215 cold-shock protein sig. 41 35
  Ralstonia solanacearum PSI07 RPSI07_RS04860 cold-shock protein no data 41 35
  Ralstonia solanacearum UW163 UW163_RS20395 cold-shock protein insig. 41 35
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_04475 cold-shock protein insig. 40 37
  Alteromonas macleodii MIT1002 MIT1002_01248 Cold shock-like protein CspG insig. 38 36