| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Marinobacter adhaerens HP15 | HP15_685 | | phage repressor | no data | 100 | 100 |
| | Pseudomonas aeruginosa MRSN321 | PFGADD_00621 | prtR | HTH-type transcriptional regulator PrtR | no data | 57 | 47 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_22355 | | HTH-type transcriptional regulator PrtR | no data | 57 | 47 |
| | Pseudomonas aeruginosa PUPa3 | NPBIFN_00625 | prtR | HTH-type transcriptional regulator PrtR | no data | 57 | 47 |
| | Pseudomonas aeruginosa MRSN321 | PFGADD_04222 | alpR | transcriptional regulator AlpR | no data | 51 | 51 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_04055 | | transcriptional regulator AlpR | no data | 51 | 51 |
| | Pseudomonas aeruginosa PUPa3 | NPBIFN_04281 | alpR | transcriptional regulator AlpR | no data | 51 | 51 |
| | Erwinia tracheiphila SCR3 | LU632_RS15100 | | helix-turn-helix transcriptional regulator | no data | 56 | 47 |
| | Shewanella oneidensis MR-1 | SO2990 | | prophage LambdaSo, transcriptional regulator, Cro/CI family (NCBI ptt file) | no data | 59 | 48 |
| | Pseudomonas sp. RS175 | PFR28_02698 | | HTH-type transcriptional regulator PrtR | no data | 49 | 54 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01325 | | HTH-type transcriptional regulator PrtR | cofit | 52 | 45 |
| | Pseudomonas simiae WCS417 | PS417_05695 | | transcriptional regulator | strong | 51 | 45 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS05780 | | helix-turn-helix transcriptional regulator | cofit | 51 | 45 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS05780 | | helix-turn-helix transcriptional regulator | strong | 51 | 45 |
| | Pseudomonas orientalis W4I3 | QF045_RS08620 | | S24 family peptidase | cofit | 51 | 45 |
| | Pseudomonas sp. FW215-L2 | GFF2579 | | HTH-type transcriptional regulator PrtR | strong | 50 | 45 |
| | Pseudomonas protegens RBAN4 | FABNJH_19430 | prtR | HTH-type transcriptional regulator PrtR | no data | 48 | 47 |
| | Pseudomonas sp. SVBP6 | COO64_RS19810 | | XRE family transcriptional regulator | no data | 50 | 45 |
| | Pseudomonas sp. FW215-L2 | GFF6481 | | HTH-type transcriptional regulator PrtR | no data | 47 | 47 |
| | Pseudomonas sp. RS175 | PFR28_00431 | | HTH-type transcriptional regulator PrtR | no data | 50 | 45 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3031 | | Transcriptional regulator, Cro/CI family | no data | 50 | 45 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_05865 | | transcriptional regulator | no data | 50 | 45 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_21390 | | Helix-turn-helix transcriptional regulator | no data | 47 | 49 |
| | Erwinia tracheiphila SCR3 | LU632_RS14255 | | helix-turn-helix transcriptional regulator | no data | 47 | 49 |
| | Pseudomonas protegens RBAN4 | FABNJH_11075 | | Transcriptional regulator | no data | 46 | 46 |
| | Serratia liquefaciens MT49 | IAI46_15200 | | helix-turn-helix transcriptional regulator | no data | 50 | 46 |
| | Enterobacter sp. TBS_079 | MPMX20_02914 | | HTH-type transcriptional regulator PrtR | no data | 38 | 62 |
| | Pseudomonas protegens RBAN4 | FABNJH_06255 | prtR | Transcriptional regulator PrtR | no data | 49 | 46 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_16630 | | transcriptional regulator | no data | 49 | 46 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3118 | | Transcriptional regulator, Cro/CI family | no data | 49 | 46 |
| | Pseudomonas sp. DMC3 | GFF2087 | | HTH-type transcriptional regulator PrtR | no data | 49 | 46 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2665 | | Transcriptional regulator | sig. | 42 | 44 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4671 | | Transcriptional regulator, Cro/CI family | strong | 48 | 46 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_1334 | | Transcriptional regulator | sig. | 42 | 44 |
| | Pseudomonas sp. DMC3 | GFF3850 | | HTH-type transcriptional regulator PrtR | insig. | 37 | 52 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5718 | | Transcriptional regulator, Cro/CI family | insig. | 47 | 46 |
| | Pectobacterium carotovorum WPP14 | HER17_RS11585 | | helix-turn-helix transcriptional regulator | no data | 41 | 47 |
| | Pseudomonas sp. RS175 | PFR28_03894 | | HTH-type transcriptional regulator PrtR | insig. | 42 | 43 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_06600 | | transcriptional regulator | sig. | 41 | 44 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4971 | | Transcriptional regulator | insig. | 39 | 44 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_15185 | | transcriptional regulator | insig. | 38 | 44 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_0623 | | Peptidase S24, S26A and S26B | insig. | 42 | 43 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0623 | | Peptidase S24, S26A and S26B | insig. | 42 | 43 |
| | Pseudomonas orientalis W4I3 | QF045_RS27135 | | helix-turn-helix transcriptional regulator | insig. | 45 | 34 |
| | Pseudomonas sp. FW215-L2 | GFF5771 | | HTH-type transcriptional regulator PrtR | sig. | 44 | 34 |
| | Serratia liquefaciens MT49 | IAI46_13755 | | helix-turn-helix transcriptional regulator | no data | 41 | 45 |
| | Acinetobacter radioresistens SK82 | MPMX26_01389 | | HTH-type transcriptional regulator PrtR | no data | 34 | 45 |
| | Pseudomonas simiae WCS417 | PS417_24850 | | transcriptional regulator | insig. | 43 | 34 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_05125 | | HTH-type transcriptional regulator PrtR | cofit | 43 | 34 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS26785 | | helix-turn-helix transcriptional regulator | insig. | 43 | 34 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS26785 | | helix-turn-helix transcriptional regulator | insig. | 43 | 34 |
| | Serratia liquefaciens MT49 | IAI46_17130 | | helix-turn-helix transcriptional regulator | insig. | 38 | 45 |
| | Pseudomonas sp. SVBP6 | COO64_RS15735 | | XRE family transcriptional regulator | insig. | 33 | 44 |
| | Marinobacter adhaerens HP15 | HP15_3106 | | phage repressor | no data | 32 | 44 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_21390 | | Helix-turn-helix transcriptional regulator | no data | 48 | 20 |
| | Erwinia tracheiphila SCR3 | LU632_RS14255 | | helix-turn-helix transcriptional regulator | no data | 48 | 20 |
| | Collimonas humicola GW821-FHT01A05 | MPMX01_03870 | | HTH-type transcriptional regulator PrtR | no data | 32 | 42 |
| | Pseudomonas putida KT2440 | PP_0537 | | putative transcriptional regulator | insig. | 31 | 34 |
| | Klebsiella michiganensis M5al | BWI76_RS15805 | | hypothetical protein | no data | 34 | 39 |
| | Escherichia coli ECRC101 | MCAODC_14835 | | HTH cro/C1-type domain-containing protein | no data | 40 | 25 |
| | Pseudomonas putida KT2440 | PP_3896 | | Transcriptional regulator, Cro/CI family | no data | 45 | 21 |
| | Pseudomonas aeruginosa MRSN321 | PFGADD_04222 | alpR | transcriptional regulator AlpR | no data | 44 | 22 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_04055 | | transcriptional regulator AlpR | no data | 44 | 22 |
| | Pseudomonas aeruginosa PUPa3 | NPBIFN_04281 | alpR | transcriptional regulator AlpR | no data | 44 | 22 |
| | Serratia liquefaciens MT49 | IAI46_15200 | | helix-turn-helix transcriptional regulator | no data | 45 | 22 |
| | Pseudomonas protegens RBAN4 | FABNJH_11075 | | Transcriptional regulator | no data | 40 | 27 |
| | Variovorax sp. SCN45 | GFF3233 | | hypothetical protein | no data | 29 | 43 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_1261 | | putative phage repressor (RefSeq) | no data | 27 | 70 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU1519 | | transcriptional regulator, putative (TIGR) | no data | 33 | 39 |
| | Pectobacterium carotovorum WPP14 | HER17_RS11585 | | helix-turn-helix transcriptional regulator | no data | 34 | 27 |
| | Collimonas humicola GW821-FHT01A05 | MPMX01_03429 | | hypothetical protein | no data | 35 | 30 |
| | Pseudomonas sp. RS175 | PFR28_02698 | | HTH-type transcriptional regulator PrtR | no data | 43 | 20 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS22040 | | S24 family peptidase | no data | 31 | 39 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU1144 | | transcriptional regulator, Cro/CI family (TIGR) | no data | 30 | 40 |
| | Acinetobacter baumannii LAC-4 | RR41_RS10280 | | LexA family transcriptional regulator | no data | 28 | 39 |
| | Shewanella oneidensis MR-1 | SO0641 | | prophage MuSo1, transcriptional regulator, Cro/CI family (NCBI ptt file) | no data | 30 | 36 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU2686 | | peptidase, S24 family (TIGR) | no data | 30 | 42 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_15100 | | 26 kDa repressor protein | no data | 40 | 21 |
| | Methylophilus sp. DMC18 | GFF2350 | | putative HTH-type transcriptional regulator | no data | 31 | 39 |
| | Rahnella sp. WP5 | EX31_RS01745 | | helix-turn-helix transcriptional regulator | no data | 30 | 39 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0710 | | putative phage repressor (RefSeq) | no data | 28 | 39 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0352 | | putative phage repressor (RefSeq) | no data | 32 | 38 |
| | Variovorax sp. SCN45 | GFF262 | | Phage repressor protein cI | insig. | 32 | 26 |
| | Pantoea sp. MT58 | IAI47_08085 | | helix-turn-helix domain-containing protein | strong | 36 | 22 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13516_RS08265 | | helix-turn-helix domain-containing protein | no data | 36 | 22 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS07035 | | S24 family peptidase | no data | 30 | 42 |
| | Pseudomonas sp. SVBP6 | COO64_RS27100 | | helix-turn-helix domain-containing protein | insig. | 40 | 19 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS10820 | | helix-turn-helix transcriptional regulator | insig. | 37 | 19 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_03065 | | DNA-binding helix-turn-helix protein | insig. | 33 | 17 |
| | Acinetobacter baumannii LAC-4 | RR41_RS10280 | | LexA family transcriptional regulator | no data | 39 | 20 |
| | Erwinia tracheiphila SCR3 | LU632_RS15100 | | helix-turn-helix transcriptional regulator | no data | 37 | 18 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT2360 | | transcriptional regulator (NCBI ptt file) | sig. | 39 | 17 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_3368 | | Predicted transcriptional regulator | strong | 29 | 41 |
| | Escherichia coli ECRC100 | OKFHMN_25250 | lexA | XRE family transcriptional regulator | no data | 41 | 19 |
| | Escherichia coli ECRC101 | MCAODC_20140 | lexA | XRE family transcriptional regulator | no data | 41 | 19 |
| | Escherichia coli ECRC102 | NIAGMN_22755 | lexA | XRE family transcriptional regulator | no data | 41 | 19 |
| | Escherichia coli ECRC98 | JDDGAC_29380 | lexA | XRE family transcriptional regulator | no data | 41 | 19 |
| | Escherichia coli ECRC99 | KEDOAH_02845 | lexA | XRE family transcriptional regulator | no data | 41 | 19 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_05321 | | DNA-binding helix-turn-helix protein | insig. | 32 | 17 |
| | Sphingobium sp. HT1-2 | GFF612 | | putative phage repressor | no data | 30 | 38 |