Homologs of GFF2252 from Variovorax sp. SCN45

RNA-2',3'-PO4:RNA-5'-OH ligase
SEED: Protein RtcB
KEGG: protein RtcB

62 hits from BLASTp (E < 0.01)

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Orth	Species	Gene	Name	Description	Fitness	%Id	Cov
	Variovorax sp. SCN45	GFF2252		RNA-2',3'-PO4:RNA-5'-OH ligase	sig.	100	100
o	Variovorax sp. OAS795	ABID97_RS24130		RtcB family protein	insig.	94	98
o	Acidovorax sp. GW101-3H11	Ac3H11_1977		Protein RtcB	insig.	83	98
o	Ralstonia solanacearum PSI07	RPSI07_RS23040		RtcB family protein	insig.	72	98
o	Ralstonia solanacearum GMI1000	RS_RS01110		RtcB family protein	insig.	72	98
o	Pseudomonas fluorescens FW300-N1B4	Pf1N1B4_5793		Protein RtcB	insig.	72	99
o	Ralstonia solanacearum IBSBF1503	RALBFv3_RS10305		RtcB family protein	insig.	72	98
o	Ralstonia solanacearum UW163	UW163_RS03275		RtcB family protein	insig.	72	98
o	Ralstonia sp. UNC404CL21Col	ABZR87_RS05940		RtcB family protein	insig.	72	98
o	Pseudomonas sp. RS175	PFR28_01832		RNA-splicing ligase RtcB	insig.	69	99
o	Cupriavidus basilensis FW507-4G11	RR42_RS23340		RNA ligase	insig.	70	99
o	Pseudomonas sp. S08-1	OH686_16250		RNA-2',3'-PO4:RNA-5'-OH ligase	insig.	71	98
o	Pectobacterium carotovorum WPP14	HER17_RS19320		RtcB family protein	insig.	67	98
o	Escherichia coli Nissle 1917	ECOLIN_RS19530		RNA-splicing ligase RtcB	insig.	67	99
o	Escherichia coli BW25113	b3421	rtcB	hypothetical protein (NCBI)	insig.	66	99
o	Escherichia fergusonii Becca	EFB2_00408		RNA-splicing ligase RtcB	insig.	67	99
o	Escherichia coli ECRC100	OKFHMN_16950	rtcB	RNA-splicing ligase RtcB	cofit	66	99
o	Escherichia coli ECRC101	MCAODC_07480	rtcB	RNA-splicing ligase RtcB	insig.	66	99
o	Escherichia coli ECRC102	NIAGMN_14720	rtcB	RNA-splicing ligase RtcB	insig.	66	99
o	Escherichia coli ECRC99	KEDOAH_11190	rtcB	RNA-splicing ligase RtcB	no data	66	99
o	Escherichia coli ECOR27	NOLOHH_08745	rtcB	RNA-splicing ligase RtcB	insig.	66	99
o	Escherichia coli ECRC62	BNILDI_02770	rtcB	RNA-splicing ligase RtcB	cofit	66	99
o	Escherichia coli HS(pFamp)R (ATCC 700891)	OHPLBJKB_00283		RNA-splicing ligase RtcB	insig.	66	99
o	Escherichia coli BL21	ECD_03272		RNA-splicing ligase	insig.	66	99
o	Escherichia coli ECOR38	HEPCGN_15770	rtcB	RNA-splicing ligase RtcB	insig.	66	99
o	Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868	GFF595		'RNA-2',3'-PO4:RNA-5'-OH ligase' transl_table=11	insig.	65	99
o	Escherichia coli ECRC98	JDDGAC_20580	rtcB	RNA-splicing ligase RtcB	cofit	65	99
o	Dyella japonica UNC79MFTsu3.2	ABZR86_RS09560		RtcB family protein	insig.	58	99
o	Xanthomonas campestris pv. campestris strain 8004	Xcc-8004.4930.1		RNA-2',3'-PO4:RNA-5'-OH ligase	insig.	58	98
o	Lysobacter sp. OAE881	ABIE51_RS18530		RtcB family protein	insig.	59	100
o	Bacteroides ovatus ATCC 8483	BACOVA_02429		hypothetical protein	insig.	41	96
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS18465		RNA-splicing ligase RtcB	insig.	36	91
o	Bacteroides thetaiotaomicron VPI-5482	BT1455		protein rtcB (NCBI ptt file)	sig.	35	97
	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS05315		RtcB family protein	insig.	36	97
	Bacteroides ovatus ATCC 8483	BACOVA_04144		hypothetical protein	insig.	34	91
	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS11270		RtcB family protein	insig.	34	91
o	Methanococcus maripaludis JJ	MMJJ_RS07190		RtcB family protein	strong	32	89
o	Methanococcus maripaludis S2	MMP_RS07165		RNA-splicing ligase RtcB	no data	32	88
o	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS10275		RNA-splicing ligase RtcB	strong	31	96
o	Desulfovibrio vulgaris Hildenborough JW710	DVU0853		conserved hypothetical protein (TIGR)	insig.	33	93
	Pectobacterium carotovorum WPP14	HER17_RS03350		RtcB family protein	insig.	31	94
o	Phocaeicola dorei CL03T12C01	ABI39_RS19560		RNA-splicing ligase RtcB	insig.	27	93
	Pectobacterium carotovorum WPP14	HER17_RS03875		RNA ligase RtcB family protein	insig.	30	93
	Escherichia coli ECOR38	HEPCGN_01325		RNA-splicing ligase RtcB	insig.	30	90
	Ralstonia solanacearum GMI1000	RS_RS20480		RNA ligase RtcB family protein	insig.	30	93
	Ralstonia solanacearum IBSBF1503	RALBFv3_RS20225		RNA ligase RtcB family protein	sig.	31	93
	Ralstonia solanacearum UW163	UW163_RS18950		RNA ligase RtcB family protein	insig.	31	93
o	Mycobacterium tuberculosis H37Rv	Rv2631		Conserved hypothetical protein	insig.	29	91
	Ralstonia sp. UNC404CL21Col	ABZR87_RS20790		RNA ligase RtcB family protein	insig.	30	93
	Ralstonia solanacearum PSI07	RPSI07_RS02635		RNA ligase RtcB family protein	strong	30	93
	Variovorax sp. OAS795	ABID97_RS05650		RtcB family protein	insig.	31	98
	Escherichia coli ECOR38	HEPCGN_07815	rtcB	RNA ligase RtcB family protein	insig.	28	93
	Escherichia coli Nissle 1917	ECOLIN_RS01790		RNA ligase RtcB family protein	insig.	28	93
	Escherichia fergusonii Becca	EFB2_03785		RNA-splicing ligase RtcB	insig.	28	93
	Escherichia coli ECOR27	NOLOHH_02085	rtcB	RNA ligase RtcB family protein	cofit	28	93
	Escherichia coli ECRC62	BNILDI_00280	rtcB	RNA ligase RtcB family protein	cofit	28	93
	Escherichia coli HS(pFamp)R (ATCC 700891)	OHPLBJKB_03405		RNA-splicing ligase RtcB	insig.	28	93
	Desulfovibrio vulgaris Miyazaki F	DvMF_2898		protein of unknown function UPF0027 (RefSeq)	insig.	38	32
	Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868	GFF4105		Protein with similarity to RtcB	insig.	27	76
	Ralstonia solanacearum IBSBF1503	RALBFv3_RS07935		hypothetical protein	insig.	36	36
	Ralstonia solanacearum UW163	UW163_RS05690		hypothetical protein	insig.	36	36
	Desulfovibrio vulgaris Miyazaki F	DvMF_2898		protein of unknown function UPF0027 (RefSeq)	insig.	28	58