| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Dickeya dadantii 3937 | DDA3937_RS04650 | | LysR family transcriptional regulator | insig. | 100 | 100 |
| o | Dickeya dianthicola 67-19 | HGI48_RS04610 | | LysR family transcriptional regulator | insig. | 95 | 100 |
| o | Dickeya dianthicola ME23 | DZA65_RS04530 | | LysR family transcriptional regulator | insig. | 95 | 100 |
| o | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS09585 | | LysR family transcriptional regulator | cofit | 60 | 92 |
| o | Pantoea sp. MT58 | IAI47_17520 | | LysR family transcriptional regulator | insig. | 60 | 92 |
| o | Pseudomonas sp. BP01 | JOY50_RS26935 | | LysR substrate-binding domain-containing protein | insig. | 49 | 93 |
| o | Variovorax sp. SCN45 | GFF7171 | | Transcriptional regulator DmlR, LysR family | insig. | 50 | 92 |
| o | Dechlorosoma suillum PS | Dsui_1892 | | transcriptional regulator | insig. | 49 | 91 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS33760 | | hypothetical protein | insig. | 49 | 91 |
| o | Ralstonia solanacearum PSI07 | RPSI07_RS15095 | | LysR family transcriptional regulator | insig. | 47 | 91 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS25045 | | LysR family transcriptional regulator | insig. | 50 | 91 |
| o | Ralstonia solanacearum GMI1000 | RS_RS21935 | | LysR family transcriptional regulator | insig. | 50 | 89 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS04415 | | LysR family transcriptional regulator | insig. | 49 | 89 |
| o | Acidovorax sp. GW101-3H11 | Ac3H11_636 | | Positive regulator of Tartrate dehydrogenase/decarboxylase/D-malic enzyme | insig. | 47 | 97 |
| o | Variovorax sp. OAS795 | ABID97_RS29215 | | LysR family transcriptional regulator | insig. | 47 | 92 |
| o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS17035 | | LysR family transcriptional regulator | insig. | 47 | 91 |
| o | Ralstonia solanacearum UW163 | UW163_RS18425 | | LysR family transcriptional regulator | insig. | 47 | 91 |
| o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2674 | | Positive regulator of Tartrate dehydrogenase/decarboxylase/D-malic enzyme | insig. | 49 | 91 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS13530 | | LysR family transcriptional regulator | no data | 47 | 92 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01533 | | transcriptional regulator, LysR family | insig. | 49 | 92 |
| o | Paraburkholderia graminis OAS925 | ABIE53_000975 | | LysR family transcriptional activator of dmlA | insig. | 47 | 92 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS10340 | | LysR family transcriptional regulator | insig. | 48 | 91 |
| | Paraburkholderia graminis OAS925 | ABIE53_005151 | | LysR family transcriptional activator of dmlA | insig. | 49 | 91 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4411 | | Transcriptional regulator, LysR family | no data | 46 | 92 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS37825 | | LysR substrate-binding domain-containing protein | insig. | 50 | 92 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS23170 | | LysR family transcriptional regulator | insig. | 46 | 89 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS01520 | | LysR family transcriptional regulator | insig. | 44 | 99 |
| | Paraburkholderia graminis OAS925 | ABIE53_005448 | | LysR family transcriptional activator of dmlA | sig. | 44 | 89 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS33490 | | LysR substrate-binding domain-containing protein | insig. | 43 | 89 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_641 | | Positive regulator of Tartrate dehydrogenase/decarboxylase/D-malic enzyme | insig. | 47 | 88 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS15205 | | LysR family transcriptional regulator | insig. | 40 | 93 |
| | Paraburkholderia graminis OAS925 | ABIE53_002538 | | DNA-binding transcriptional LysR family regulator | sig. | 39 | 89 |
| | Dechlorosoma suillum PS | Dsui_0016 | | transcriptional regulator | strong | 41 | 92 |
| o | Pseudomonas simiae WCS417 | PS417_09420 | | LysR family transcriptional regulator | insig. | 40 | 91 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS06260 | | LysR family transcriptional regulator | insig. | 41 | 89 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_3258 | | Positive regulator of Tartrate dehydrogenase/decarboxylase/D-malic enzyme | insig. | 41 | 96 |
| | Agrobacterium fabrum C58 | Atu3951 | | LysR family transcriptional regulator | insig. | 44 | 92 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS07400 | | LysR family transcriptional regulator | strong | 41 | 91 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03261 | | transcriptional regulator, LysR family | no data | 41 | 91 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS10075 | | LysR family transcriptional regulator | insig. | 39 | 90 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS10075 | | LysR family transcriptional regulator | insig. | 39 | 90 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS04600 | | LysR family transcriptional regulator | insig. | 44 | 88 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00578 | | transcriptional regulator, LysR family | insig. | 38 | 89 |
| o | Pseudomonas sp. RS175 | PFR28_01512 | | HTH-type transcriptional regulator DmlR | insig. | 39 | 91 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS28855 | | LysR family transcriptional regulator | no data | 39 | 92 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS09225 | | LysR family transcriptional regulator | insig. | 44 | 91 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS12295 | | LysR family transcriptional regulator | sig. | 38 | 89 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS10025 | | LysR family transcriptional regulator | insig. | 42 | 91 |
| o | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4227 | | Putative LysR family transcriptional regulator | insig. | 38 | 96 |
| o | Lysobacter sp. OAE881 | ABIE51_RS06090 | | LysR family transcriptional regulator | insig. | 41 | 92 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_06344 | | transcriptional regulator, LysR family | insig. | 39 | 92 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS05530 | | LysR family transcriptional regulator | insig. | 44 | 91 |
| | Paraburkholderia graminis OAS925 | ABIE53_002082 | | DNA-binding transcriptional LysR family regulator | insig. | 43 | 91 |
| | Paraburkholderia graminis OAS925 | ABIE53_005024 | | LysR family transcriptional activator of dmlA | insig. | 39 | 91 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS28830 | | LysR family transcriptional regulator | insig. | 36 | 93 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS22135 | | LysR family transcriptional regulator | insig. | 42 | 91 |
| o | Pseudomonas sp. SVBP6 | COO64_RS24670 | | LysR family transcriptional regulator | insig. | 39 | 92 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS19825 | | LysR family transcriptional regulator | insig. | 38 | 91 |
| o | Pseudomonas stutzeri RCH2 | Psest_1182 | | Transcriptional regulator | strong | 39 | 88 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS30230 | | LysR family transcriptional regulator | insig. | 38 | 92 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00866 | | transcriptional regulator, LysR family | no data | 42 | 91 |
| o | Rhizobium sp. OAE497 | ABIE40_RS06595 | | LysR family transcriptional regulator | insig. | 40 | 91 |
| o | Klebsiella michiganensis M5al | BWI76_RS10685 | | LysR family transcriptional regulator | strong | 37 | 96 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS32010 | | LysR substrate-binding domain-containing protein | insig. | 39 | 96 |
| o | Serratia liquefaciens MT49 | IAI46_21020 | | LysR family transcriptional regulator | insig. | 38 | 92 |
| o | Klebsiella pneumoniae MKP103 | KDGMDA_18325 | | LysR family transcriptional regulator | insig. | 39 | 91 |
| o | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS18110 | | LysR family transcriptional regulator | insig. | 38 | 94 |
| | Paraburkholderia graminis OAS925 | ABIE53_002133 | | molybdate transport repressor ModE-like protein | no data | 38 | 91 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS03880 | | LysR family transcriptional regulator | insig. | 37 | 91 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS00160 | | LysR family transcriptional regulator | no data | 39 | 92 |
| | Ralstonia solanacearum UW163 | UW163_RS13490 | | LysR family transcriptional regulator | no data | 39 | 92 |
| | Pseudomonas sp. BP01 | JOY50_RS08035 | | LysR substrate-binding domain-containing protein | insig. | 38 | 96 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_715 | | Transcriptional regulator, LysR family, in glycolate utilization operon | sig. | 38 | 93 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS08655 | | LysR family transcriptional regulator | sig. | 38 | 91 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3594 | | Putative transcriptional regulator LYSR-type | insig. | 36 | 90 |
| o | Sphingobium sp. HT1-2 | GFF2551 | | Transcriptional regulator, LysR family | cofit | 41 | 92 |
| | Ralstonia solanacearum GMI1000 | RS_RS16435 | | LysR family transcriptional regulator | insig. | 38 | 91 |
| o | Escherichia coli BL21 | ECD_01769 | | transcriptional activator of dmlA | no data | 37 | 91 |
| o | Escherichia coli ECOR27 | NOLOHH_17150 | dmlR | DNA-binding transcriptional regulator DmlR | no data | 37 | 91 |
| o | Escherichia coli ECOR38 | HEPCGN_05020 | dmlR | DNA-binding transcriptional regulator DmlR | insig. | 37 | 91 |
| o | Escherichia coli ECRC100 | OKFHMN_26630 | dmlR | DNA-binding transcriptional regulator DmlR | insig. | 37 | 91 |
| o | Escherichia coli ECRC101 | MCAODC_18780 | dmlR | DNA-binding transcriptional regulator DmlR | insig. | 37 | 91 |
| o | Escherichia coli ECRC102 | NIAGMN_01435 | dmlR | DNA-binding transcriptional regulator DmlR | cofit | 37 | 91 |
| o | Escherichia coli ECRC62 | BNILDI_15935 | dmlR | DNA-binding transcriptional regulator DmlR | insig. | 37 | 91 |
| o | Escherichia coli ECRC98 | JDDGAC_01205 | dmlR | DNA-binding transcriptional regulator DmlR | insig. | 37 | 91 |
| o | Escherichia coli ECRC99 | KEDOAH_01480 | dmlR | DNA-binding transcriptional regulator DmlR | no data | 37 | 91 |
| o | Shewanella loihica PV-4 | Shew_2292 | | LysR family transcriptional regulator (RefSeq) | insig. | 40 | 92 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS16400 | | LysR family transcriptional regulator | insig. | 39 | 92 |
| o | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01934 | | HTH-type transcriptional regulator DmlR | insig. | 37 | 91 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS37260 | | LysR family transcriptional regulator | insig. | 35 | 92 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS32460 | | LysR family transcriptional regulator | insig. | 39 | 92 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS08570 | | LysR family transcriptional regulator | insig. | 37 | 91 |
| | Ralstonia solanacearum UW163 | UW163_RS05040 | | LysR family transcriptional regulator | insig. | 37 | 91 |
| o | Acinetobacter baumannii LAC-4 | RR41_RS15030 | | LysR family transcriptional regulator | insig. | 34 | 92 |
| | Ralstonia solanacearum GMI1000 | RS_RS06820 | | LysR family transcriptional regulator | insig. | 38 | 92 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS12185 | | LysR family transcriptional regulator | insig. | 38 | 92 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS17325 | | LysR family transcriptional regulator | insig. | 38 | 92 |
| | Paraburkholderia graminis OAS925 | ABIE53_002002 | | DNA-binding transcriptional LysR family regulator | strong | 38 | 92 |
| o | Pseudomonas syringae pv. syringae B728a | Psyr_2397 | | transcriptional regulator, LysR family | insig. | 38 | 92 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2397 | | transcriptional regulator, LysR family | insig. | 38 | 92 |