Homologs of BBR_RS17475 from Bifidobacterium breve UCC2003

cold-shock protein
SEED: Cold shock protein CspG
KEGG: cold shock protein (beta-ribbon, CspA family)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Bifidobacterium breve UCC2003 BBR_RS17475 cold-shock protein strong 100 100
o Pseudomonas simiae WCS417 PS417_19715 cold-shock protein no data 58 90
o Mycobacterium tuberculosis H37Rv Rv3648c Probable cold shock protein A CspA no data 54 90
o Serratia liquefaciens MT49 IAI46_08680 cold-shock protein insig. 54 86
o Herbaspirillum seropedicae SmR1 HSERO_RS07020 cold-shock protein no data 50 86
o Rahnella sp. WP5 EX31_RS18215 cold-shock protein insig. 52 87
o Enterobacter asburiae PDN3 EX28DRAFT_3819 Cold shock proteins no data 51 86
  Herbaspirillum seropedicae SmR1 HSERO_RS15195 cold-shock protein no data 49 87
o Dechlorosoma suillum PS Dsui_2659 cold shock protein cofit 49 90
o Paraburkholderia sabiae LMG 24235 QEN71_RS36275 cold-shock protein no data 51 86
o Escherichia coli BL21 ECD_00593 constitutive cold shock family transcription antitermination protein; negative regulator of cspA transcription; RNA melting protein; ssDNA-binding protein insig. 49 87
o Escherichia fergusonii Becca EFB2_03468 Cold shock-like protein CspE insig. 49 87
o Escherichia coli ECOR27 NOLOHH_23795 cspE transcription antiterminator/RNA stability regulator CspE insig. 49 87
o Escherichia coli ECOR38 HEPCGN_00855 cspE transcription antiterminator/RNA stability regulator CspE cofit 49 87
o Escherichia coli ECRC101 OKFHMN_07420 cspE transcription antiterminator/RNA stability regulator CspE strong 49 87
o Escherichia coli ECRC101 MCAODC_26635 cspE transcription antiterminator/RNA stability regulator CspE sig. 49 87
o Escherichia coli ECRC102 NIAGMN_05475 cspE transcription antiterminator/RNA stability regulator CspE sig. 49 87
o Escherichia coli ECRC62 BNILDI_21805 cspE transcription antiterminator/RNA stability regulator CspE insig. 49 87
o Escherichia coli ECRC98 JDDGAC_11065 cspE transcription antiterminator/RNA stability regulator CspE no data 49 87
o Escherichia coli ECRC99 KEDOAH_20550 cspE transcription antiterminator/RNA stability regulator CspE no data 49 87
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03082 Cold shock-like protein CspE strong 49 87
o Escherichia coli Nissle 1917 ECOLIN_RS03400 transcription antiterminator/RNA stability regulator CspE cofit 49 87
o Escherichia coli BW25113 b0623 cspE cold shock protein E (NCBI) strong 49 87
  Enterobacter asburiae PDN3 EX28DRAFT_2340 Cold shock proteins no data 48 87
o Enterobacter sp. TBS_079 MPMX20_01283 Cold shock-like protein CspE sig. 48 87
  Rahnella sp. WP5 EX31_RS23030 transcription antiterminator/RNA stability regulator CspE sig. 48 87
o Dickeya dadantii 3937 DDA3937_RS06115 transcription antiterminator/RNA stability regulator CspE no data 46 87
o Dickeya dianthicola 67-19 HGI48_RS06165 transcription antiterminator/RNA stability regulator CspE no data 46 87
o Dickeya dianthicola ME23 DZA65_RS06510 transcription antiterminator/RNA stability regulator CspE insig. 46 87
o Pantoea sp. MT58 IAI47_14075 transcription antiterminator/RNA stability regulator CspE sig. 48 87
o Ralstonia sp. UNC404CL21Col ABZR87_RS19675 cold-shock protein insig. 51 87
  Serratia liquefaciens MT49 IAI46_10520 RNA chaperone/antiterminator CspA no data 53 86
o Rhodanobacter sp. FW510-T8 OKGIIK_07815 cspC cold-shock protein no data 51 86
  Dickeya dianthicola 67-19 HGI48_RS19865 cold-shock protein no data 50 86
  Dickeya dianthicola ME23 DZA65_RS20940 cold-shock protein insig. 50 86
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4536 Cold shock protein CspE no data 49 87
  Escherichia coli BL21 ECD_03406 RNA chaperone and antiterminator, cold-inducible no data 50 86
  Dickeya dadantii 3937 DDA3937_RS19755 cold-shock protein insig. 50 86
  Escherichia fergusonii Becca EFB2_00251 Cold shock protein CspA insig. 50 86
  Escherichia coli ECOR27 NOLOHH_07950 cspA Major cold shock protein insig. 50 86
  Escherichia coli ECOR38 HEPCGN_14895 cspA Major cold shock protein cofit 50 86
  Escherichia coli ECRC101 OKFHMN_16005 cspA Major cold shock protein no data 50 86
  Escherichia coli ECRC101 MCAODC_06520 cspA Major cold shock protein insig. 50 86
  Escherichia coli ECRC102 NIAGMN_13765 cspA Major cold shock protein no data 50 86
  Escherichia coli ECRC62 BNILDI_03595 cspA Major cold shock protein no data 50 86
  Escherichia coli ECRC98 JDDGAC_19635 cspA Major cold shock protein no data 50 86
  Escherichia coli ECRC99 KEDOAH_12145 cspA Major cold shock protein no data 50 86
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00150 Cold shock protein CspA insig. 50 86
  Escherichia coli Nissle 1917 ECOLIN_RS20345 RNA chaperone/antiterminator CspA cofit 50 86
  Escherichia coli BW25113 b3556 cspA major cold shock protein (NCBI) no data 50 86
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF454 Cold shock protein CspA insig. 50 86
  Paraburkholderia sabiae LMG 24235 QEN71_RS41860 cold-shock protein no data 49 90
  Dechlorosoma suillum PS Dsui_0007 cold shock protein insig. 49 89
  Serratia liquefaciens MT49 IAI46_05870 transcription antiterminator/RNA stability regulator CspE insig. 46 87
  Enterobacter sp. TBS_079 MPMX20_00176 Cold shock protein CspA sig. 50 86
  Paraburkholderia sabiae LMG 24235 QEN71_RS43010 cold-shock protein insig. 50 86
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS18735 cold-shock protein insig. 50 86
o Ralstonia solanacearum GMI1000 RS_RS22215 cold-shock protein sig. 50 86
o Ralstonia solanacearum PSI07 RPSI07_RS04860 cold-shock protein no data 50 86
o Ralstonia solanacearum UW163 UW163_RS20395 cold-shock protein insig. 50 86
o Vibrio cholerae E7946 ATCC 55056 CSW01_14830 cold-shock protein CspA no data 50 86
o Pectobacterium carotovorum WPP14 HER17_RS11745 RNA chaperone/antiterminator CspA no data 51 86
o Burkholderia phytofirmans PsJN BPHYT_RS10920 cold-shock protein no data 49 86
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01154 cold-shock DNA-binding protein family no data 49 86
o Paraburkholderia graminis OAS925 ABIE53_002280 CspA family cold shock protein no data 49 86
  Paraburkholderia sabiae LMG 24235 QEN71_RS02995 cold shock domain-containing protein CspD sig. 49 86
  Ralstonia solanacearum GMI1000 RS_RS12380 cold-shock protein no data 49 86
o Erwinia tracheiphila SCR3 LU632_RS16440 cspE transcription antiterminator/RNA stability regulator CspE no data 46 87
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS07090 cold-shock protein no data 51 86
  Erwinia tracheiphila SCR3 LU632_RS19015 cspA RNA chaperone/antiterminator CspA insig. 50 86
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03525 cold-shock DNA-binding protein family sig. 48 87
  Paraburkholderia graminis OAS925 ABIE53_004735 CspA family cold shock protein strong 48 87
o Klebsiella michiganensis M5al BWI76_RS07980 cold-shock protein no data 46 87
o Pseudomonas syringae pv. syringae B728a Psyr_2160 cold-shock DNA-binding protein family insig. 52 82
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2160 cold-shock DNA-binding protein family no data 52 82
o Shewanella amazonensis SB2B Sama_2963 cold-shock DNA-binding domain-containing protein (RefSeq) insig. 50 86
  Burkholderia phytofirmans PsJN BPHYT_RS15720 cold-shock protein no data 49 86
  Burkholderia phytofirmans PsJN BPHYT_RS34185 cold-shock protein sig. 49 86
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04084 cold-shock DNA-binding protein family no data 49 86
  Paraburkholderia graminis OAS925 ABIE53_003308 CspA family cold shock protein no data 49 86
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS04820 cold-shock protein no data 49 86
  Ralstonia solanacearum UW163 UW163_RS08850 cold-shock protein no data 49 86
  Vibrio cholerae E7946 ATCC 55056 CSW01_18795 cold-shock protein CspV insig. 49 86
  Escherichia coli BL21 ECD_00992 cold shock protein-like protein, cold-inducible no data 47 86
  Escherichia fergusonii Becca EFB2_03089 Cold shock-like protein CspG insig. 47 86
  Escherichia coli ECOR27 NOLOHH_21625 cspG cold shock protein CspG no data 47 86
  Escherichia coli ECOR38 HEPCGN_23410 cspG cold shock protein CspG no data 47 86
  Escherichia coli ECRC101 OKFHMN_04730 cspG cold shock protein CspG no data 47 86
  Escherichia coli ECRC101 MCAODC_24115 cspG cold shock protein CspG no data 47 86
  Escherichia coli ECRC102 NIAGMN_23120 cspG cold shock protein CspG no data 47 86
  Escherichia coli ECRC62 BNILDI_19790 cspG cold shock protein CspG no data 47 86
  Escherichia coli ECRC98 JDDGAC_08340 cspG cold shock protein CspG no data 47 86
  Escherichia coli ECRC99 KEDOAH_23015 cspG cold shock protein CspG no data 47 86
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02677 Cold shock-like protein CspG no data 47 86
  Escherichia coli Nissle 1917 ECOLIN_RS05165 cold shock protein CspG no data 47 86
  Escherichia coli BW25113 b0990 cspG DNA-binding transcriptional regulator (NCBI) insig. 47 86
  Cupriavidus basilensis FW507-4G11 RR42_RS37135 cold-shock protein insig. 46 90
o Cupriavidus basilensis FW507-4G11 RR42_RS37535 cold-shock protein no data 46 90
  Rahnella sp. WP5 EX31_RS10935 transcription antiterminator/RNA stability regulator CspE cofit 46 90
  Klebsiella michiganensis M5al BWI76_RS26980 cold-shock protein sig. 49 86