Homologs of AMB_RS06220 from Magnetospirillum magneticum AMB-1

TRAP-type C4-dicarboxylate transport system
SEED: TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Magnetospirillum magneticum AMB-1 AMB_RS06220 TRAP-type C4-dicarboxylate transport system insig. 100 100
o Azospirillum brasilense Sp245 AZOBR_RS23415 C4-dicarboxylate ABC transporter substrate-binding protein insig. 43 91
  Pseudomonas sp. RS175 PFR28_01614 hypothetical protein insig. 35 79
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF175 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 33 94
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1301 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 33 79
  Pseudomonas segetis P6 ACVTMO_RS13445 TRAP transporter substrate-binding protein insig. 31 92
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2987 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 32 92
  Acidovorax sp. GW101-3H11 Ac3H11_3524 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 33 87
  Azospirillum sp. SherDot2 MPMX19_03529 2,3-diketo-L-gulonate-binding periplasmic protein YiaO insig. 35 74
  Pseudomonas fluorescens FW300-N2C3 AO356_25645 ABC transporter substrate-binding protein insig. 34 79
  Variovorax sp. OAS795 ABID97_RS19625 TRAP transporter substrate-binding protein insig. 31 90
  Sinorhizobium meliloti 1021 SMc00271 periplasmic binding protein insig. 33 98
  Azospirillum sp. SherDot2 MPMX19_04764 Solute-binding protein insig. 31 96
  Escherichia coli ECOR27 NOLOHH_07820 yiaO 2,3-diketo-L-gulonate transporter substrate-binding protein YiaO insig. 33 83
  Escherichia coli ECOR38 HEPCGN_14765 yiaO 2,3-diketo-L-gulonate transporter substrate-binding protein YiaO insig. 32 83
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2093 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 35 72
  Sinorhizobium meliloti 1021 SM_b21438 C4-dicarboxylate transport system, C4-dicarboxylate-binding protein precursor signal peptide insig. 31 74
  Escherichia coli ECRC62 BNILDI_03725 yiaO 2,3-diketo-L-gulonate transporter substrate-binding protein YiaO insig. 33 83
  Escherichia fergusonii Becca EFB2_00227 2,3-diketo-L-gulonate-binding periplasmic protein YiaO insig. 32 83
  Escherichia coli Nissle 1917 ECOLIN_RS20470 2,3-diketo-L-gulonate TRAP transporter substrate-binding protein YiaO insig. 32 83
  Escherichia coli BL21 ECD_03431 2,3-diketo-L-gulonate-binding periplasmic protein insig. 32 83
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00125 2,3-diketo-L-gulonate-binding periplasmic protein YiaO insig. 32 83
  Escherichia coli BW25113 b3579 yiaO predicted transporter (NCBI) insig. 32 83
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5231 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 29 94
  Variovorax sp. SCN45 GFF6468 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein insig. 30 73
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF430 2,3-diketo-L-gulonate-binding periplasmic protein yiaO precursor insig. 30 92
  Sinorhizobium meliloti 1021 SMa0252 TRAP-type periplasmic solute-binding protein insig. 33 65
  Acidovorax sp. GW101-3H11 Ac3H11_1227 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 33 75
  Variovorax sp. SCN45 GFF1519 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 34 68
  Acidovorax sp. GW101-3H11 Ac3H11_161 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein insig. 30 73
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1783 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein insig. 32 78
  Agrobacterium fabrum C58 Atu2744 C4-dicarboxylate binding protein insig. 32 69
  Castellaniella sp019104865 MT123 ABCV34_RS11540 TRAP transporter substrate-binding protein insig. 30 80
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1656 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 31 87
  Bosea sp. OAE506 ABIE41_RS24145 TRAP transporter substrate-binding protein insig. 30 90
  Azospirillum brasilense Sp245 AZOBR_RS15915 gluconate TRAP transporter, periplasmic solute-binding component (from data) strong 32 64
  Pseudomonas segetis P6 ACVTMO_RS07590 TRAP transporter substrate-binding protein insig. 28 82
  Sinorhizobium meliloti 1021 SM_b20036 ABC transporter substrate-binding protein insig. 32 70
  Xanthobacter sp. DMC5 GFF2557 Solute-binding protein insig. 32 75
  Variovorax sp. SCN45 GFF1521 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 30 87
  Acidovorax sp. GW101-3H11 Ac3H11_2073 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 34 70
  Pseudomonas segetis P6 ACVTMO_RS12155 TRAP transporter substrate-binding protein insig. 29 69
  Azospirillum sp. SherDot2 MPMX19_05866 hypothetical protein insig. 29 74
  Pseudomonas segetis P6 ACVTMO_RS17840 TRAP transporter substrate-binding protein insig. 30 64
  Dinoroseobacter shibae DFL-12 Dshi_1834 TRAP dicarboxylate transporter- DctP subunit (RefSeq) insig. 30 66
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5015 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 30 81
  Herbaspirillum seropedicae SmR1 HSERO_RS05560 ABC transporter substrate-binding protein insig. 29 76
  Rhodopseudomonas palustris CGA009 TX73_014410 TRAP transporter substrate-binding protein insig. 29 73
  Pseudomonas stutzeri RCH2 Psest_2125 D-gluconate TRAP transporter, periplasmic component (from data) strong 33 63
  Azospirillum brasilense Sp245 AZOBR_RS26640 ABC transporter substrate-binding protein insig. 32 71
  Herbaspirillum seropedicae SmR1 HSERO_RS02540 ABC transporter substrate-binding protein insig. 29 77
  Azospirillum sp. SherDot2 MPMX19_00659 C4-dicarboxylate-binding periplasmic protein DctP insig. 28 77
  Bosea sp. OAE506 ABIE41_RS20755 TRAP transporter substrate-binding protein insig. 30 64
  Pseudomonas sp. BP01 JOY50_RS04225 TRAP transporter substrate-binding protein no data 31 76
  Acidovorax sp. GW101-3H11 Ac3H11_3226 gluconate TRAP transporter, periplasmic solute-binding component (from data) strong 29 65
  Dinoroseobacter shibae DFL-12 Dshi_4191 TRAP dicarboxylate transporter, DctP subunit (RefSeq) insig. 34 60
  Bosea sp. OAE506 ABIE41_RS07830 TRAP transporter substrate-binding protein insig. 30 78
  Sinorhizobium meliloti 1021 SMc00265 periplasmic binding protein insig. 29 67
  Sinorhizobium meliloti 1021 SM_b21353 periplasmic C4-dicarboxylate transport protein insig. 29 93
  Burkholderia phytofirmans PsJN BPHYT_RS30445 ABC transporter substrate-binding protein no data 29 81
  Rhodospirillum rubrum S1H Rru_A3678 TRAP dicarboxylate transporter- DctP subunit (NCBI) strong 31 72
  Pseudomonas aeruginosa PUPa3 DQ20_RS43070 dctP;go_process=transmembrane TRAP transporter substrate-binding protein DctP insig. 31 73
  Pseudomonas segetis P6 ACVTMO_RS20175 TRAP transporter substrate-binding protein insig. 29 68
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2974 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 32 62
  Pseudomonas aeruginosa MRSN321 DY961_RS14030 dctP;go_process=transmembrane TRAP transporter substrate-binding protein DctP insig. 31 73
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5505 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein insig. 27 74
  Herbaspirillum seropedicae SmR1 HSERO_RS19065 ABC transporter substrate-binding protein insig. 26 77
  Pseudomonas aeruginosa PA14 IKLFDK_19460 TRAP transporter substrate-binding protein DctP insig. 30 73
  Pseudomonas syringae pv. syringae B728a Psyr_0900 TRAP dicarboxylate transporter- DctP subunit insig. 27 89
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0900 TRAP dicarboxylate transporter- DctP subunit insig. 27 89
  Variovorax sp. OAS795 ABID97_RS26055 TRAP transporter substrate-binding protein no data 29 74
  Magnetospirillum magneticum AMB-1 AMB_RS04560 C4-dicarboxylate ABC transporter cofit 29 72
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03359 tripartite ATP-independent transporter solute receptor, DctP family insig. 29 71
  Pseudomonas orientalis W4I3 QF045_RS19030 TRAP transporter substrate-binding protein cofit 31 68
  Azospirillum brasilense Sp245 AZOBR_RS26435 ABC transporter substrate-binding protein insig. 32 62
  Pseudomonas sp. BP01 JOY50_RS02035 TRAP transporter substrate-binding protein insig. 29 68
  Pseudomonas putida KT2440 PP_1169 D-glucuronate / D-galacturonate TRAP transporter, solute receptor component (from data) strong 29 68
  Rahnella sp. WP5 EX31_RS08010 TRAP transporter substrate-binding protein insig. 27 68
  Castellaniella sp019104865 MT123 ABCV34_RS07845 TRAP transporter substrate-binding protein insig. 27 74
  Castellaniella sp019104865 MT123 ABCV34_RS13980 TRAP transporter substrate-binding protein insig. 26 78
  Azospirillum sp. SherDot2 MPMX19_04770 Sialic acid-binding periplasmic protein SiaP insig. 30 74
  Pseudomonas sp. DMC3 GFF1616 Solute-binding protein cofit 30 79
  Pseudomonas segetis P6 ACVTMO_RS11805 TRAP transporter substrate-binding protein cofit 28 76
  Paraburkholderia sabiae LMG 24235 QEN71_RS16015 TRAP transporter substrate-binding protein insig. 28 81
  Agrobacterium fabrum C58 Atu4826 ABC transporter substrate binding protein insig. 26 69
  Xanthobacter sp. DMC5 GFF2851 2,3-diketo-L-gulonate-binding periplasmic protein YiaO insig. 31 67
  Pseudomonas stutzeri RCH2 Psest_0363 tripartite ATP-independent periplasmic transporter solute receptor, DctP family insig. 30 68
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03761 tripartite ATP-independent transporter solute receptor, DctP family insig. 28 85
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_487 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 30 79
  Castellaniella sp019104865 MT123 ABCV34_RS12265 TRAP transporter substrate-binding protein insig. 29 64
  Acidovorax sp. GW101-3H11 Ac3H11_3957 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 30 69
  Alteromonas macleodii MIT1002 MIT1002_02426 Extracytoplasmic solute receptor protein YiaO insig. 31 65
  Castellaniella sp019104865 MT123 ABCV34_RS12250 TRAP transporter substrate-binding protein insig. 30 73
  Cellulophaga baltica 18 M666_RS19720 TRAP transporter substrate-binding protein insig. 27 75
  Pantoea sp. MT58 IAI47_03230 TRAP transporter substrate-binding protein insig. 27 72
  Azospirillum brasilense Sp245 AZOBR_RS09605 C4-dicarboxylate ABC transporter sig. 25 88
  Pectobacterium carotovorum WPP14 HER17_RS19675 TRAP transporter substrate-binding protein insig. 26 78
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS16465 TRAP transporter substrate-binding protein cofit 27 79
  Pseudomonas sp. RS175 PFR28_02438 Solute-binding protein strong 31 68
  Paraburkholderia graminis OAS925 ABIE53_005305 tripartite ATP-independent transporter DctP family solute receptor insig. 28 91