Homologs of Shew_3410 from Shewanella loihica PV-4

permease (RefSeq)
SEED: Transporter

74 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella loihica PV-4 Shew_3410 permease (RefSeq) strong 100 100
o Shewanella sp. ANA-3 Shewana3_0443 permease (RefSeq) strong 66 100
o Shewanella oneidensis MR-1 SO0444 hypothetical protein (NCBI ptt file) strong 65 100
o Shewanella amazonensis SB2B Sama_0397 hypothetical protein (RefSeq) strong 61 98
o Desulfovibrio vulgaris Hildenborough JW710 DVU3386 permease, putative (TIGR) strong 39 89
o Alteromonas macleodii MIT1002 MIT1002_03707 putative permease insig. 54 40
o Alteromonas macleodii MIT1002 MIT1002_03707 putative permease insig. 43 52
  Shewanella sp. ANA-3 Shewana3_2338 permease (RefSeq) insig. 24 84
  Shewanella oneidensis MR-1 SO0503 conserved hypothetical protein (NCBI ptt file) insig. 23 83
  Methanococcus maripaludis S2 MMP_RS04175 permease insig. 36 25
  Escherichia coli ECOR38 HEPCGN_15275 yraQ Uncharacterized membrane protein YraQ, UPF0718 family cofit 21 83
  Escherichia coli ECOR27 NOLOHH_08300 putative permease cofit 20 83
  Escherichia coli ECRC62 BNILDI_03255 putative permease insig. 21 83
  Serratia liquefaciens MT49 IAI46_02115 permease insig. 28 29
  Alteromonas macleodii MIT1002 MIT1002_02442 putative permease insig. 25 37
  Dinoroseobacter shibae DFL-12 Dshi_0586 permease (RefSeq) insig. 36 22
  Pseudomonas stutzeri RCH2 Psest_2252 Predicted permeases insig. 30 28
  Desulfovibrio vulgaris Miyazaki F DvMF_2282 permease (RefSeq) insig. 29 34
  Enterobacter asburiae PDN3 EX28DRAFT_3200 Predicted permeases insig. 27 26
  Phaeobacter inhibens DSM 17395 PGA1_c28790 Predicted permeases sig. 32 23
  Herbaspirillum seropedicae SmR1 HSERO_RS15810 membrane protein insig. 25 24
  Bacteroides thetaiotaomicron VPI-5482 BT0112 putative permease (NCBI ptt file) sig. 35 14
o Desulfovibrio vulgaris Hildenborough JW710 DVU3386 permease, putative (TIGR) strong 33 20
  Azospirillum sp. SherDot2 MPMX19_06338 hypothetical protein insig. 31 28
  Pseudomonas simiae WCS417 PS417_10470 membrane protein insig. 23 31
  Phocaeicola dorei CL03T12C01 ABI39_RS07350 permease insig. 31 25
  Methanococcus maripaludis S2 MMP_RS05040 permease insig. 28 28
  Enterobacter sp. TBS_079 MPMX20_04055 hypothetical protein insig. 26 23
  Klebsiella michiganensis M5al BWI76_RS24935 hypothetical protein insig. 25 25
  Alteromonas macleodii MIT1002 MIT1002_02442 putative permease insig. 27 36
  Methanococcus maripaludis JJ MMJJ_RS04255 permease insig. 30 33
  Methanococcus maripaludis S2 MMP_RS01120 permease insig. 30 33
  Escherichia coli BL21 ECD_03018 putative inner membrane permease insig. 23 30
  Escherichia coli ECRC62 BNILDI_01520 yraQ UPF0718 protein YraQ insig. 23 30
  Dechlorosoma suillum PS Dsui_0924 putative permease cofit 32 24
  Escherichia coli ECOR27 NOLOHH_10010 yraQ UPF0718 protein YraQ cofit 23 24
  Bacteroides thetaiotaomicron VPI-5482 BT0112 putative permease (NCBI ptt file) sig. 24 38
  Escherichia coli ECRC101 OKFHMN_18210 yraQ UPF0718 protein YraQ insig. 23 24
  Escherichia coli ECRC101 MCAODC_08730 yraQ UPF0718 protein YraQ insig. 23 24
  Escherichia coli ECRC102 NIAGMN_15970 yraQ UPF0718 protein YraQ insig. 23 24
  Escherichia coli ECRC98 JDDGAC_21835 yraQ UPF0718 protein YraQ no data 23 24
  Escherichia coli ECRC99 KEDOAH_09940 yraQ UPF0718 protein YraQ no data 23 24
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00549 hypothetical protein insig. 23 24
  Escherichia coli Nissle 1917 ECOLIN_RS18110 permease insig. 23 24
  Escherichia coli BW25113 b3151 yraQ predicted permease (NCBI) insig. 23 24
  Methanococcus maripaludis JJ MMJJ_RS00095 permease insig. 27 29
  Escherichia fergusonii Becca EFB2_00672 hypothetical protein insig. 23 24
  Pseudomonas sp. RS175 PFR28_01287 hypothetical protein insig. 28 15
  Desulfovibrio vulgaris Miyazaki F DvMF_2194 permease (RefSeq) insig. 26 18
  Pseudomonas fluorescens FW300-N2E3 AO353_00040 hypothetical protein insig. 26 15
  Escherichia coli ECOR38 HEPCGN_17085 yraQ UPF0718 protein YraQ cofit 23 24
  Methanococcus maripaludis S2 MMP_RS04175 permease insig. 25 24
  Serratia liquefaciens MT49 IAI46_02115 permease insig. 34 26
  Desulfovibrio vulgaris Miyazaki F DvMF_2282 permease (RefSeq) insig. 32 32
  Dechlorosoma suillum PS Dsui_0960 putative permease cofit 34 25
  Escherichia coli ECOR27 NOLOHH_10010 yraQ UPF0718 protein YraQ cofit 29 30
o Alteromonas macleodii MIT1002 MIT1002_03707 putative permease insig. 26 25
  Escherichia coli BL21 ECD_03018 putative inner membrane permease insig. 29 30
  Escherichia coli ECRC62 BNILDI_01520 yraQ UPF0718 protein YraQ insig. 29 30
  Escherichia coli ECOR38 HEPCGN_17085 yraQ UPF0718 protein YraQ cofit 30 30
  Dechlorosoma suillum PS Dsui_0960 putative permease cofit 30 19
  Phaeobacter inhibens DSM 17395 PGA1_c28790 Predicted permeases sig. 29 26
  Escherichia coli ECRC101 OKFHMN_18210 yraQ UPF0718 protein YraQ insig. 29 30
  Escherichia coli ECRC101 MCAODC_08730 yraQ UPF0718 protein YraQ insig. 29 30
  Escherichia coli ECRC102 NIAGMN_15970 yraQ UPF0718 protein YraQ insig. 29 30
  Escherichia coli ECRC98 JDDGAC_21835 yraQ UPF0718 protein YraQ no data 29 30
  Escherichia coli ECRC99 KEDOAH_09940 yraQ UPF0718 protein YraQ no data 29 30
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00549 hypothetical protein insig. 29 30
  Escherichia coli BW25113 b3151 yraQ predicted permease (NCBI) insig. 29 30
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS04525 permease insig. 24 26
  Escherichia coli Nissle 1917 ECOLIN_RS18110 permease insig. 30 30
  Shewanella sp. ANA-3 Shewana3_2338 permease (RefSeq) insig. 32 16
  Dinoroseobacter shibae DFL-12 Dshi_0586 permease (RefSeq) insig. 29 22
  Paraburkholderia graminis OAS925 ABIE53_004983 uncharacterized membrane protein YraQ (UPF0718 family) sig. 27 29