| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Rhodospirillum rubrum S1H | Rru_A2984 | | CrtD protein (NCBI) | sig. | 100 | 100 |
| o | Rhodopseudomonas palustris CGA009 | TX73_007805 | | phytoene desaturase family protein | sig. | 60 | 98 |
| o | Bosea sp. OAE506 | ABIE41_RS09870 | | 1-hydroxycarotenoid 3,4-desaturase CrtD | insig. | 57 | 100 |
| o | Dinoroseobacter shibae DFL-12 | Dshi_3513 | | Zeta-phytoene desaturase (RefSeq) | sig. | 46 | 98 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS19065 | | 1-hydroxycarotenoid 3,4-desaturase CrtD | insig. | 30 | 98 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_17000 | | phytoene dehydrogenase | insig. | 32 | 94 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS25315 | | phytoene dehydrogenase | insig. | 30 | 94 |
| | Azospirillum brasilense Sp245 | AZOBR_RS10340 | | phytoene desaturase | insig. | 32 | 100 |
| | Rhodopseudomonas palustris CGA009 | TX73_007770 | | phytoene desaturase | no data | 27 | 96 |
| | Bosea sp. OAE506 | ABIE41_RS09845 | | phytoene desaturase | insig. | 30 | 98 |
| | Azospirillum sp. SherDot2 | MPMX19_05311 | | 4,4'-diapolycopene oxygenase | insig. | 31 | 94 |
| | Azospirillum brasilense Sp245 | AZOBR_RS10345 | | phytoene desaturase | sig. | 28 | 98 |
| | Pseudomonas stutzeri RCH2 | Psest_0404 | | phytoene desaturase | insig. | 27 | 99 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS04375 | | phytoene desaturase | insig. | 28 | 97 |
| | Rhodospirillum rubrum S1H | Rru_A0493 | | Phytoene desaturase (NCBI) | strong | 27 | 97 |
| | Azospirillum sp. SherDot2 | MPMX19_05312 | | 4,4'-diapophytoene desaturase (4,4'-diapolycopene-forming) | insig. | 28 | 94 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_10910 | | phytoene dehydrogenase | sig. | 27 | 98 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_1477 | | phytoene desaturase | insig. | 27 | 94 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS16545 | | NAD(P)/FAD-dependent oxidoreductase | insig. | 26 | 98 |
| | Xanthobacter sp. DMC5 | GFF434 | | Phytoene desaturase (lycopene-forming) | insig. | 26 | 98 |
| | Dinoroseobacter shibae DFL-12 | Dshi_3508 | | Zeta-phytoene desaturase (RefSeq) | sig. | 29 | 98 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS14250 | | phytoene desaturase | cofit | 26 | 98 |
| | Pantoea sp. MT58 | IAI47_20665 | | phytoene desaturase | insig. | 26 | 98 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS24235 | | phytoene dehydrogenase | insig. | 25 | 93 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_2417 | | phytoene desaturase | strong | 27 | 98 |
| | Sphingobium sp. HT1-2 | GFF788 | | Phytoene desaturase (lycopene-forming) (EC 1.3.99.31) | cofit | 26 | 98 |
| | Cellulophaga baltica 18 | M666_RS09515 | | phytoene desaturase family protein | cofit | 24 | 98 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_1246 | crtiso | carotene isomerase | strong | 26 | 54 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS16540 | | carotene isomerase | strong | 26 | 54 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_0538 | | Phytoene dehydrogenase and related proteins | insig. | 25 | 99 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS08895 | | FAD-dependent oxidoreductase | strong | 44 | 14 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1875 | | Protoporphyrinogen oxidase (EC 1.3.3.4) | insig. | 40 | 11 |
| | Variovorax sp. OAS795 | ABID97_RS18020 | | FAD-dependent oxidoreductase | insig. | 42 | 12 |
| | Ralstonia solanacearum GMI1000 | RS_RS09250 | | NAD(P)/FAD-dependent oxidoreductase | sig. | 25 | 97 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS15345 | | FAD-dependent oxidoreductase | strong | 24 | 59 |
| | Variovorax sp. SCN45 | GFF591 | | Renalase (EC 1.6.3.5), oxidases 1,2-dihydro- and 1,6-dihydro- beta-NAD(P)H isomers back to NAD(P) | insig. | 40 | 12 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.3665.1 | | COG3380: Amine oxidase, flavin-containing | insig. | 46 | 11 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_4161 | | COG3380: Amine oxidase, flavin-containing | insig. | 42 | 12 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_05242 | | 4Fe-4S binding domain protein | insig. | 34 | 12 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_01175 | | FAD dependent oxidoreductase | insig. | 32 | 19 |
| | Marinobacter adhaerens HP15 | HP15_1766 | | FAD dependent oxidoreductase | insig. | 44 | 11 |
| | Variovorax sp. OAS795 | ABID97_RS27040 | | NAD(P)/FAD-dependent oxidoreductase | insig. | 25 | 97 |
| | Dechlorosoma suillum PS | Dsui_2191 | | squalene-associated FAD-dependent desaturase | insig. | 43 | 11 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS21495 | | FAD-dependent oxidoreductase | no data | 37 | 12 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c25710 | | putative N-methylproline demethylase StcD | insig. | 55 | 8 |
| | Pantoea sp. MT58 | IAI47_03760 | | FAD-dependent 2-octaprenylphenol hydroxylase | no data | 38 | 12 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_01575 | | protoporphyrinogen oxidase | insig. | 36 | 13 |
| | Azospirillum brasilense Sp245 | AZOBR_RS06660 | | phytoene dehydrogenase | insig. | 27 | 51 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_1824 | | Phytoene dehydrogenase and related proteins | insig. | 26 | 57 |
| | Dinoroseobacter shibae DFL-12 | Dshi_1885 | | monooxygenase FAD-binding (RefSeq) | no data | 51 | 9 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS15940 | | FAD-dependent 2-octaprenylphenol hydroxylase | no data | 38 | 12 |
| | Methanococcus maripaludis JJ | MMJJ_RS00855 | | CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein | insig. | 42 | 9 |
| | Methanococcus maripaludis S2 | MMP_RS04295 | | CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein | sig. | 42 | 9 |
| | Sinorhizobium meliloti 1021 | SMa0817 | | oxidoreductase FixC | insig. | 52 | 9 |
| | Pseudomonas putida KT2440 | PP_4456 | | opine oxidase subunit A | insig. | 46 | 8 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS14080 | | D-amino-acid dehydrogenase | no data | 33 | 17 |