| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Rhodospirillum rubrum S1H | Rru_A0919 | | Two Component Transcriptional Regulator, AraC family (NCBI) | insig. | 100 | 100 |
| | Methylophilus sp. DMC18 | GFF2152 | | Transcriptional regulatory protein YpdB | cofit | 41 | 33 |
| | Klebsiella michiganensis M5al | BWI76_RS10640 | | AraC family transcriptional regulator | insig. | 38 | 32 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_4417 | | Helix-turn-helix domain | insig. | 32 | 43 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_09345 | | AraC family transcriptional regulator | insig. | 30 | 46 |
| | Pseudomonas sp. SVBP6 | COO64_RS14210 | narL | two-component system response regulator NarL | insig. | 39 | 33 |
| | Escherichia coli ECOR27 | NOLOHH_16025 | pocR | regulatory protein PocR | insig. | 36 | 29 |
| | Kangiella aquimarina DSM 16071 | B158DRAFT_0251 | | two component transcriptional regulator, LytTR family | cofit | 36 | 38 |
| | Klebsiella michiganensis M5al | BWI76_RS23095 | | hypothetical protein | insig. | 36 | 29 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_03665 | | regulatory protein PocR | insig. | 36 | 28 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3949 | | Propanediol utilization transcriptional activator | insig. | 35 | 31 |
| | Enterobacter sp. TBS_079 | MPMX20_04525 | | HTH-type transcriptional activator RhaR | insig. | 32 | 43 |
| | Pseudomonas sp. S08-1 | OH686_02580 | | hypothetical protein | insig. | 34 | 29 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_24485 | | regulator | insig. | 28 | 52 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_22075 | | hypothetical protein | strong | 36 | 33 |
| | Erwinia amylovora T8 | OLJFJH_14320 | | arabinose operon transcriptional regulator AraC | insig. | 32 | 32 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03428 | | Nitrate/nitrite response regulator protein NarL | cofit | 37 | 33 |
| | Pseudomonas segetis P6 | ACVTMO_RS22440 | | LytR/AlgR family response regulator transcription factor | strong | 40 | 33 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_25185 | | hypothetical protein | sig. | 35 | 33 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5741 | | Nitrate/nitrite response regulator protein | no data | 37 | 33 |
| | Rahnella sp. WP5 | EX31_RS16720 | | helix-turn-helix domain-containing protein | sig. | 39 | 27 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_725 | | Nitrate/nitrite response regulator protein | strong | 35 | 33 |
| | Pseudomonas sp. SVBP6 | COO64_RS09150 | | response regulator transcription factor | insig. | 33 | 33 |
| | Klebsiella michiganensis M5al | BWI76_RS00825 | | AraC family transcriptional regulator | insig. | 28 | 46 |
| | Escherichia coli ECRC100 | OKFHMN_13605 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | cofit | 37 | 29 |
| | Escherichia coli ECRC101 | MCAODC_04105 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | insig. | 37 | 29 |
| | Escherichia coli ECRC102 | NIAGMN_11355 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | cofit | 37 | 29 |
| | Escherichia coli ECRC98 | JDDGAC_17230 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | insig. | 37 | 29 |
| | Escherichia coli ECRC99 | KEDOAH_14555 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | no data | 37 | 29 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS22825 | | AraC family transcriptional regulator | insig. | 37 | 29 |
| | Escherichia coli BL21 | ECD_03839 | | AraC family putative transcriptional activator | insig. | 37 | 29 |
| | Escherichia fergusonii Becca | EFB2_04660 | | HTH-type transcriptional activator RhaS | insig. | 37 | 29 |
| | Escherichia coli ECOR27 | NOLOHH_05750 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | insig. | 37 | 29 |
| | Escherichia coli ECOR38 | HEPCGN_12250 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | insig. | 37 | 29 |
| | Escherichia coli ECRC62 | BNILDI_05775 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | cofit | 37 | 29 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_04096 | | HTH-type transcriptional activator RhaS | insig. | 37 | 29 |
| | Escherichia coli BW25113 | b3954 | yijO | predicted DNA-binding transcriptional regulator (NCBI) | insig. | 37 | 29 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_19930 | | AraC family transcriptional regulator | insig. | 35 | 32 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_0063 | | Two-component response regulator AlgR | sig. | 38 | 33 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0063 | | Two-component response regulator AlgR | insig. | 38 | 33 |
| | Rahnella sp. WP5 | EX31_RS14690 | | helix-turn-helix transcriptional regulator | insig. | 36 | 30 |
| | Pseudomonas sp. RS175 | PFR28_01628 | | Nitrate/nitrite response regulator protein NarL | insig. | 35 | 33 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS12185 | algR;inference=COORDINATES | alginate biosynthesis regulator AlgR | strong | 38 | 33 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_27150 | | alginate biosynthesis regulator AlgR | strong | 38 | 33 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS49935 | algR;inference=COORDINATES | alginate biosynthesis regulator AlgR | strong | 38 | 33 |
| | Pantoea sp. MT58 | IAI47_10375 | | arabinose operon transcriptional regulator AraC | insig. | 32 | 30 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS05755 | | arabinose operon transcriptional regulator AraC | cofit | 32 | 30 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2340 | | Transcriptional regulator, AraC family | insig. | 39 | 26 |
| | Variovorax sp. SCN45 | GFF1929 | | Transcriptional regulator, AraC family | insig. | 35 | 29 |
| | Variovorax sp. OAS795 | ABID97_RS20685 | | AraC family transcriptional regulator | insig. | 34 | 32 |
| | Pseudomonas stutzeri RCH2 | Psest_2631 | | AraC-type DNA-binding domain-containing proteins | sig. | 31 | 28 |
| | Klebsiella michiganensis M5al | BWI76_RS11895 | | AraC family transcriptional regulator | sig. | 36 | 33 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5905 | | Transcriptional regulator of various polyols utilization, AraC family | insig. | 34 | 32 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_19900 | | AraC family transcriptional regulator | insig. | 31 | 33 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS25180 | | AraC family transcriptional regulator | insig. | 29 | 30 |
| | Paraburkholderia graminis OAS925 | ABIE53_004405 | | AraC-like DNA-binding protein | strong | 27 | 52 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3545 | | Transcriptional regulator, AraC family | strong | 36 | 29 |
| | Marinobacter adhaerens HP15 | HP15_2741 | | transcriptional regulator, AraC family protein | insig. | 31 | 48 |
| | Pseudomonas sp. SVBP6 | COO64_RS23480 | | response regulator transcription factor | insig. | 31 | 30 |
| | Cellulophaga baltica 18 | M666_RS07365 | | AraC family transcriptional regulator | insig. | 34 | 30 |
| | Dechlorosoma suillum PS | Dsui_0109 | | response regulator of the LytR/AlgR family | cofit | 33 | 46 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS14630 | | AraC family transcriptional regulator | sig. | 33 | 31 |
| | Rahnella sp. WP5 | EX31_RS10900 | | helix-turn-helix domain-containing protein | insig. | 35 | 29 |
| | Azospirillum sp. SherDot2 | MPMX19_01511 | | HTH-type transcriptional activator RhaR | insig. | 35 | 32 |
| | Pseudomonas simiae WCS417 | PS417_15740 | | hypothetical protein | insig. | 34 | 33 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4833 | | DNA-binding response regulator, LuxR family | sig. | 28 | 33 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS34420 | | AraC family transcriptional regulator | insig. | 29 | 39 |
| | Bosea sp. OAE506 | ABIE41_RS18945 | | AraC family transcriptional regulator | insig. | 30 | 29 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS17030 | | AraC family transcriptional regulator | insig. | 31 | 30 |
| | Escherichia fergusonii Becca | EFB2_02032 | | Response regulator UvrY | cofit | 34 | 33 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01815 | | Response regulator UvrY | insig. | 34 | 33 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS10900 | | UvrY/SirA/GacA family response regulator transcription factor | no data | 34 | 33 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3044 | | Transcriptional regulator of various polyols utilization, AraC family | strong | 32 | 28 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_09180 | | DNA-binding response regulator | insig. | 30 | 29 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS05740 | | AraC family transcriptional regulator | insig. | 29 | 44 |
| | Variovorax sp. SCN45 | GFF4698 | | Transcriptional regulator of various polyols utilization, AraC family | insig. | 29 | 43 |
| | Escherichia fergusonii Becca | EFB2_02296 | | HTH-type transcriptional activator RhaS | sig. | 36 | 29 |
| | Escherichia coli ECOR27 | NOLOHH_17700 | ydiP | Uncharacterized HTH-type transcriptional regulator YdiP | no data | 36 | 29 |
| | Escherichia coli ECRC62 | BNILDI_16490 | ydiP | Uncharacterized HTH-type transcriptional regulator YdiP | insig. | 36 | 29 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS09475 | | AraC family transcriptional regulator | no data | 36 | 29 |
| | Escherichia coli BW25113 | b1696 | ydiP | predicted DNA-binding transcriptional regulator (NCBI) | insig. | 36 | 29 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1699 | | BarA-associated response regulator UvrY (= GacA = SirA) | cofit | 35 | 33 |
| | Escherichia coli BW25113 | b1914 | uvrY | response regulator (NCBI) | sig. | 34 | 33 |
| | Klebsiella michiganensis M5al | BWI76_RS12430 | | AraC family transcriptional regulator | insig. | 30 | 29 |
| | Pseudomonas sp. S08-1 | OH686_13895 | | Alginate biosynthesis two-component system response regulator AlgR | insig. | 42 | 29 |
| | Escherichia coli ECOR38 | HEPCGN_05565 | araC | AraC family transcriptional regulator | insig. | 36 | 29 |
| | Escherichia coli ECRC100 | OKFHMN_27180 | ydiP | Uncharacterized HTH-type transcriptional regulator YdiP | cofit | 36 | 29 |
| | Escherichia coli ECRC101 | MCAODC_18230 | ydiP | Uncharacterized HTH-type transcriptional regulator YdiP | insig. | 36 | 29 |
| | Escherichia coli ECRC102 | NIAGMN_00885 | ydiP | Uncharacterized HTH-type transcriptional regulator YdiP | insig. | 36 | 29 |
| | Escherichia coli ECRC98 | JDDGAC_01755 | ydiP | Uncharacterized HTH-type transcriptional regulator YdiP | insig. | 36 | 29 |
| | Escherichia coli ECRC99 | KEDOAH_00930 | ydiP | Uncharacterized HTH-type transcriptional regulator YdiP | no data | 36 | 29 |
| | Klebsiella michiganensis M5al | BWI76_RS18335 | | DNA-binding response regulator | strong | 35 | 34 |
| | Lysobacter sp. OAE881 | ABIE51_RS02955 | | LytTR family DNA-binding domain-containing protein | sig. | 34 | 35 |
| | Serratia liquefaciens MT49 | IAI46_07760 | | helix-turn-helix domain-containing protein | insig. | 33 | 32 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_01620 | | AraC family transcriptional regulator | insig. | 33 | 28 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_506 | | Transcriptional regulator, AraC family | insig. | 32 | 31 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS13705 | | AraC family transcriptional regulator | insig. | 30 | 27 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_0633 | | two component transcriptional regulator, LuxR family | strong | 36 | 33 |
| | Enterobacter sp. TBS_079 | MPMX20_02839 | | Response regulator UvrY | strong | 36 | 33 |
| | Rahnella sp. WP5 | EX31_RS24145 | | UvrY/SirA/GacA family response regulator transcription factor | cofit | 33 | 33 |