Conservation of cofitness between Xcc-8004.2713.1 and Xcc-8004.3494.1 in Xanthomonas campestris pv. campestris strain 8004

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.2713.1 Nitrate/nitrite transporter 1.0 Xcc-8004.3494.1 Molybdopterin biosynthesis protein MoeB 0.32 14
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_4099 Nitrate/nitrite transporter 0.40 PfGW456L13_4719 HesA/MoeB/ThiF family protein related to EC-YgdL low > 87
Pseudomonas stutzeri RCH2 0.64 Psest_1932 nitrite extrusion protein (nitrite facilitator) 0.39 Psest_1619 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 low > 67
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_02760 MFS transporter 0.40 AO356_06085 thiamine biosynthesis protein ThiF low > 104
Pseudomonas fluorescens FW300-N2E2 0.64 Pf6N2E2_2376 nitrate transporter (from data) 0.39 Pf6N2E2_3081 HesA/MoeB/ThiF family protein related to EC-YgdL low > 103
Pseudomonas sp. RS175 0.63 PFR28_01051 Nitrate transporter 0.40 PFR28_00387 tRNA threonylcarbamoyladenosine dehydratase low > 88
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_3839 Nitrate/nitrite transporter 0.40 Pf1N1B4_3074 HesA/MoeB/ThiF family protein related to EC-YgdL low > 87
Pseudomonas syringae pv. syringae B728a 0.62 Psyr_2102 Nitrate transporter 0.39 Psyr_1333 UBA/THIF-type NAD/FAD binding fold protein low > 86
Pseudomonas fluorescens SBW25 0.62 PFLU_RS22580 NarK/NasA family nitrate transporter 0.40 PFLU_RS06230 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 109
Pseudomonas fluorescens SBW25-INTG 0.62 PFLU_RS22580 NarK/NasA family nitrate transporter 0.40 PFLU_RS06230 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.62 Psyr_2102 Nitrate transporter 0.39 Psyr_1333 UBA/THIF-type NAD/FAD binding fold protein low > 86
Pseudomonas simiae WCS417 0.61 PS417_20970 MFS transporter 0.40 PS417_06165 thiamine biosynthesis protein ThiF low > 88
Pseudomonas fluorescens FW300-N2E3 0.61 AO353_00795 MFS transporter 0.40 AO353_16420 thiamine biosynthesis protein ThiF low > 101
Pseudomonas sp. S08-1 0.59 OH686_00515 Nitrate transporter NasA 0.38 OH686_06545 HesA/MoeB/ThiF family protein low > 80
Pseudomonas putida KT2440 0.59 PP_2092 Nitrate transporter 0.41 PP_1527 tRNA threonylcarbamoyladenosine dehydratase (t(6)A37 dehydratase) low > 96
Variovorax sp. OAS795 0.32 ABID97_RS20580 MFS transporter 0.30 ABID97_RS16680 tRNA threonylcarbamoyladenosine dehydratase low > 91
Acidovorax sp. GW101-3H11 0.31 Ac3H11_3234 Nitrate/nitrite transporter 0.29 Ac3H11_2482 Probable HesA/MoeB/ThiF family protein low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF3668 Nitrate/nitrite transporter 0.26 GFF4538 Probable HesA/MoeB/ThiF family protein low > 90
Herbaspirillum seropedicae SmR1 0.21 HSERO_RS18155 major facilitator transporter 0.39 HSERO_RS06230 heme biosynthesis protein HemY low > 78
Ralstonia solanacearum PSI07 0.20 RPSI07_RS06715 NarK/NasA family nitrate transporter 0.35 RPSI07_RS20115 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 81
Paraburkholderia graminis OAS925 0.19 ABIE53_005346 NNP family nitrate/nitrite transporter-like MFS transporter 0.40 ABIE53_003371 tRNA A37 threonylcarbamoyladenosine dehydratase low > 113
Cupriavidus basilensis FW507-4G11 0.19 RR42_RS08830 MFS transporter 0.36 RR42_RS15305 heme biosynthesis protein HemY low > 128
Ralstonia solanacearum GMI1000 0.19 RS_RS21805 NarK/NasA family nitrate transporter 0.39 RS_RS03895 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 80
Rhodanobacter denitrificans FW104-10B01 0.18 LRK54_RS14015 NarK/NasA family nitrate transporter 0.64 LRK54_RS14805 tRNA threonylcarbamoyladenosine dehydratase low > 59
Rhodanobacter sp. FW510-T8 0.18 OKGIIK_05325 MFS transporter 0.62 OKGIIK_03630 tcdA tRNA A37 threonylcarbamoyladenosine dehydratase low > 52
Rhodanobacter denitrificans MT42 0.18 LRK55_RS13735 nitrate/nitrite transporter 0.64 LRK55_RS14520 tRNA threonylcarbamoyladenosine dehydratase low > 63
Paraburkholderia sabiae LMG 24235 0.18 QEN71_RS10450 nitrate/nitrite transporter 0.41 QEN71_RS02715 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 153
Castellaniella sp019104865 MT123 0.18 ABCV34_RS12010 nitrate/nitrite transporter 0.27 ABCV34_RS00665 tRNA threonylcarbamoyladenosine dehydratase — —
Klebsiella michiganensis M5al 0.10 BWI76_RS17340 NarK family nitrate/nitrite MFS transporter 0.43 BWI76_RS22975 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 92
Enterobacter sp. TBS_079 0.10 MPMX20_02616 Nitrate/nitrite transporter NarK 0.43 MPMX20_03675 tRNA threonylcarbamoyladenosine dehydratase low > 85
Enterobacter asburiae PDN3 0.10 EX28DRAFT_0850 nitrite extrusion protein (nitrite facilitator) 0.43 EX28DRAFT_2888 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.08 GFF2763 Nitrate/nitrite transporter 0.46 GFF4870 CsdL (EC-YgdL) protein of the HesA/MoeB/ThiF family, part of the CsdA-E-L sulfur transfer pathway low > 78
Serratia liquefaciens MT49 0.08 IAI46_15600 NarK family nitrate/nitrite MFS transporter 0.45 IAI46_20360 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 86
Escherichia fergusonii Becca 0.08 EFB2_02702 Nitrate/nitrite transporter NarK 0.46 EFB2_01105 tRNA threonylcarbamoyladenosine dehydratase low > 86
Escherichia coli Nissle 1917 0.08 ECOLIN_RS07390 nitrate transporter NarK 0.45 ECOLIN_RS15670 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 55
Escherichia coli ECRC62 0.08 BNILDI_18670 narK nitrate transporter NarK 0.45 BNILDI_10480 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 75
Escherichia coli BL21 0.08 ECD_01201 nitrate/nitrite transporter 0.45 ECD_02663 tRNA threonylcarbamoyladenosine dehydratase; sulfur acceptor for CsdA low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.08 OHPLBJKB_02460 Nitrate/nitrite transporter NarK 0.45 OHPLBJKB_00919 tRNA threonylcarbamoyladenosine dehydratase low > 73
Escherichia coli ECRC102 0.08 NIAGMN_27700 narK nitrate transporter NarK 0.45 NIAGMN_17865 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA — —
Escherichia coli ECOR27 0.08 NOLOHH_20520 narK nitrate transporter NarK 0.45 NOLOHH_11975 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 75
Escherichia coli ECRC100 0.08 OKFHMN_28535 narK nitrate transporter NarK 0.45 OKFHMN_20095 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 80
Escherichia coli ECOR38 0.08 HEPCGN_24995 narK nitrate transporter NarK 0.45 HEPCGN_19350 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 87
Escherichia coli ECRC99 0.08 KEDOAH_25530 narK nitrate transporter NarK 0.45 KEDOAH_08035 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA — —
Escherichia coli ECRC98 0.08 JDDGAC_06040 narK nitrate transporter NarK 0.45 JDDGAC_23760 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 86
Escherichia coli ECRC101 0.08 MCAODC_21725 narK nitrate transporter NarK 0.45 MCAODC_10620 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 87
Escherichia coli BW25113 0.08 b1223 narK nitrate/nitrite transporter (NCBI) 0.45 b2812 ygdL hypothetical protein (NCBI) low > 76
Pantoea sp. MT58 0.07 IAI47_04250 NarK family nitrate/nitrite MFS transporter 0.46 IAI47_04005 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 76

Not shown: 9 genomes with orthologs for Xcc-8004.2713.1 only; 21 genomes with orthologs for Xcc-8004.3494.1 only