| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Rhodopseudomonas palustris CGA009 | 1.0 | TX73_019580 | | FAD-dependent oxidoreductase | 1.0 | TX73_012660 | | dicarboxylate/amino acid:cation symporter | 0.49 | 19 |
| Marinobacter adhaerens HP15 | 0.47 | HP15_27 | | FAD-dependent pyridine nucleotide-disulfide oxidoreductase | 0.17 | HP15_2676 | | proton/sodium-glutamate symport protein | low | > 73 |
| Variovorax sp. OAS795 | 0.46 | ABID97_RS18770 | | FAD-dependent oxidoreductase | 0.52 | ABID97_RS26560 | | dicarboxylate/amino acid:cation symporter | — | — |
| Acidovorax sp. GW101-3H11 | 0.46 | Ac3H11_2771 | | Ferredoxin reductase | 0.49 | Ac3H11_719 | | Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate, aspartate | low | > 79 |
| Pseudomonas fluorescens GW456-L13 | 0.45 | PfGW456L13_3417 | | Ferredoxin reductase | 0.49 | PfGW456L13_2016 | | C4-dicarboxylate transporter (from data) | low | > 87 |
| Azospirillum brasilense Sp245 | 0.41 | AZOBR_RS28130 | | pyridine nucleotide-disulfide oxidoreductase | 0.50 | AZOBR_RS21140 | | C4-dicarboxylate ABC transporter | low | > 97 |
| Pseudomonas sp. S08-1 | 0.40 | OH686_18325 | | Ferredoxin reductase | 0.50 | OH686_20585 | | Na+/H+-dicarboxylate symporter | low | > 80 |
| Pseudomonas fluorescens FW300-N2E2 | 0.39 | Pf6N2E2_1861 | | Ferredoxin reductase | 0.49 | Pf6N2E2_5707 | | Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate | low | > 103 |
| Paraburkholderia sabiae LMG 24235 | 0.39 | QEN71_RS09505 | | FAD-dependent oxidoreductase | 0.54 | QEN71_RS01365 | | dicarboxylate/amino acid:cation symporter | low | > 153 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.39 | H281DRAFT_03846 | | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit | 0.53 | H281DRAFT_02039 | | aerobic C4-dicarboxylate transport protein | low | > 103 |
| Caulobacter crescentus NA1000 | 0.36 | CCNA_03640 | | phenylpropionate dioxygenase ferredoxin reductase subunit | 0.52 | CCNA_00664 | | C4-dicarboxylate transport protein | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.36 | CCNA_03640 | | phenylpropionate dioxygenase ferredoxin reductase subunit | 0.52 | CCNA_00664 | | C4-dicarboxylate transport protein | — | — |
| Variovorax sp. SCN45 | 0.36 | GFF5697 | | Ferredoxin reductase | 0.51 | GFF822 | | Na+/H+-dicarboxylate symporter | — | — |
| Sinorhizobium meliloti 1021 | 0.33 | SMc00914 | | oxidoreductase | 0.50 | SM_b20611 | | C4-dicarboxylate transporter DctA | low | > 103 |
| Sphingomonas koreensis DSMZ 15582 | 0.33 | Ga0059261_1696 | | Pyridine nucleotide-disulphide oxidoreductase/Reductase C-terminal | 0.49 | Ga0059261_1634 | | Na+/H+-dicarboxylate symporters | — | — |
| Rhizobium sp. OAE497 | 0.32 | ABIE40_RS06005 | | FAD-dependent oxidoreductase | 0.54 | ABIE40_RS26345 | | dicarboxylate/amino acid:cation symporter | — | — |
| Agrobacterium fabrum C58 | 0.32 | Atu1013 | | ferredoxin reductase | 0.54 | Atu3298 | | C4-dicarboxylate transporter DctA | — | — |
| Ralstonia solanacearum UW163 | 0.32 | UW163_RS12860 | | pyridine nucleotide-disulfide oxidoreductase | 0.57 | UW163_RS02795 | | dicarboxylate/amino acid:cation symporter | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.32 | RALBFv3_RS15400 | | pyridine nucleotide-disulfide oxidoreductase | 0.57 | RALBFv3_RS10785 | | dicarboxylate/amino acid:cation symporter | low | > 76 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.30 | A4249_RS10680 | | FAD-dependent oxidoreductase | 0.50 | A4249_RS04425 | | dicarboxylate/amino acid:cation symporter | — | — |
| Paraburkholderia graminis OAS925 | 0.29 | ABIE53_004610 | | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit | 0.52 | ABIE53_004012 | | aerobic C4-dicarboxylate transport protein | low | > 113 |
| Burkholderia phytofirmans PsJN | 0.28 | BPHYT_RS34990 | | FAD-dependent pyridine nucleotide-disulfide oxidoreductase | 0.53 | BPHYT_RS02510 | | C4-dicarboxylate ABC transporter | low | > 109 |
| Pseudomonas fluorescens FW300-N2C3 | 0.27 | AO356_30130 | | pyridine nucleotide-disulfide oxidoreductase | 0.48 | AO356_18980 | | sodium:C4-dicarboxylate symporter (dctA) (from data) | low | > 104 |
| Pseudomonas fluorescens FW300-N1B4 | 0.27 | Pf1N1B4_4393 | | Ferredoxin reductase | 0.49 | Pf1N1B4_3487 | | Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate, aspartate | low | > 87 |
| Pseudomonas fluorescens SBW25 | 0.27 | PFLU_RS11740 | | NAD(P)-binding protein | 0.50 | PFLU_RS23115 | | dicarboxylate/amino acid:cation symporter | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.27 | PFLU_RS11740 | | NAD(P)-binding protein | 0.50 | PFLU_RS23115 | | dicarboxylate/amino acid:cation symporter | low | > 109 |
| Ralstonia solanacearum PSI07 | 0.26 | RPSI07_RS17955 | | FAD-dependent pyridine nucleotide-disulfide oxidoreductase | 0.57 | RPSI07_RS22530 | | dicarboxylate/amino acid:cation symporter | low | > 81 |
| Pseudomonas simiae WCS417 | 0.26 | PS417_11105 | | pyridine nucleotide-disulfide oxidoreductase | 0.50 | PS417_21500 | | C4 dicarboxylate transporter DctA (from data) | — | — |
| Escherichia coli ECRC100 | 0.26 | OKFHMN_21560 | hcaD | phenylpropionate dioxygenase ferredoxin reductase subunit | 0.53 | OKFHMN_16195 | dctA | C4-dicarboxylate transporter DctC | low | > 80 |
| Escherichia coli ECRC102 | 0.26 | NIAGMN_19330 | hcaD | phenylpropionate dioxygenase ferredoxin reductase subunit | 0.53 | NIAGMN_13960 | dctA | C4-dicarboxylate transporter DctC | — | — |
| Escherichia coli ECRC99 | 0.26 | KEDOAH_06660 | hcaD | phenylpropionate dioxygenase ferredoxin reductase subunit | 0.53 | KEDOAH_11955 | dctA | C4-dicarboxylate transporter DctC | — | — |
| Escherichia coli ECRC101 | 0.26 | MCAODC_12090 | hcaD | phenylpropionate dioxygenase ferredoxin reductase subunit | 0.53 | MCAODC_06710 | dctA | C4-dicarboxylate transporter DctC | low | > 87 |
| Escherichia coli ECRC98 | 0.26 | JDDGAC_25235 | hcaD | phenylpropionate dioxygenase ferredoxin reductase subunit | 0.53 | JDDGAC_19825 | dctA | C4-dicarboxylate transporter DctC | low | > 86 |
| Mycobacterium tuberculosis H37Rv | 0.26 | Rv0688 | | Putative ferredoxin reductase | 0.36 | Rv2443 | | Probable C4-dicarboxylate-transport transmembrane protein DctA | low | > 58 |
| Escherichia coli ECOR38 | 0.26 | HEPCGN_20700 | hcaD | phenylpropionate dioxygenase ferredoxin reductase subunit | 0.53 | HEPCGN_15100 | dctA | C4-dicarboxylate transporter DctC | low | > 87 |
| Cupriavidus basilensis FW507-4G11 | 0.25 | RR42_RS26430 | | ferredoxin reductase | 0.55 | RR42_RS01695 | | C4-dicarboxylate transporter | low | > 128 |
| Escherichia coli ECRC62 | 0.24 | BNILDI_12030 | hcaD | phenylpropionate dioxygenase ferredoxin reductase subunit | 0.53 | BNILDI_03395 | dctA | C4-dicarboxylate transporter DctC | low | > 75 |
| Escherichia coli ECOR27 | 0.24 | NOLOHH_13230 | hcaD | phenylpropionate dioxygenase ferredoxin reductase subunit | 0.53 | NOLOHH_08160 | dctA | C4-dicarboxylate transporter DctC | low | > 75 |
| Escherichia coli BL21 | 0.24 | ECD_02434 | | phenylpropionate dioxygenase, ferredoxin reductase subunit | 0.53 | ECD_03376 | | C4-dicarboxylic acid, orotate and citrate transporter | low | > 61 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.24 | OHPLBJKB_01167 | | 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin--NAD(+) reductase component | 0.53 | OHPLBJKB_00174 | | Aerobic C4-dicarboxylate transport protein | low | > 73 |
| Escherichia coli BW25113 | 0.24 | b2542 | hcaD | phenylpropionate dioxygenase, ferredoxin reductase subunit (NCBI) | 0.53 | b3528 | dctA | C4 dicarboxylate/orotate:H+ symporter (DctA) (from data) | low | > 76 |
| Acinetobacter radioresistens SK82 | 0.24 | MPMX26_00332 | | 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin--NAD(+) reductase component | 0.51 | MPMX26_02024 | | C4-dicarboxylate transport protein 2 | low | > 36 |
| Serratia liquefaciens MT49 | 0.23 | IAI46_21090 | | FAD-dependent oxidoreductase | 0.51 | IAI46_00550 | | dicarboxylate/amino acid:cation symporter | low | > 86 |
| Enterobacter sp. TBS_079 | 0.21 | MPMX20_03790 | | p-cumate 2,3-dioxygenase system, ferredoxin--NAD(+) reductase component | 0.51 | MPMX20_04413 | | Aerobic C4-dicarboxylate transport protein | low | > 85 |
| Rhodanobacter denitrificans FW104-10B01 | 0.18 | LRK54_RS06930 | | FAD-dependent oxidoreductase | 0.12 | LRK54_RS00700 | | dicarboxylate/amino acid:cation symporter | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.18 | LRK55_RS06670 | | FAD-dependent oxidoreductase | 0.12 | LRK55_RS00475 | | dicarboxylate/amino acid:cation symporter | low | > 63 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.14 | CA264_08995 | | FAD-dependent oxidoreductase | 0.29 | CA264_01055 | | dicarboxylate/amino acid:cation symporter | low | > 74 |
Not shown: 5 genomes with orthologs for TX73_019580 only; 38 genomes with orthologs for TX73_012660 only