Conservation of cofitness between TX73_024670 and TX73_010535 in Rhodopseudomonas palustris CGA009

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_024670 3-hydroxybutyryl-CoA dehydrogenase 1.0 TX73_010535 biotin synthase BioB 0.49 17
Rhizobium sp. OAE497 0.75 ABIE40_RS17510 3-hydroxybutyryl-CoA dehydrogenase 0.61 ABIE40_RS21075 biotin synthase BioB low > 107
Agrobacterium fabrum C58 0.74 Atu3597 3-hydroxybutyryl-CoA dehydrogenase 0.63 Atu3997 biotin synthetase low > 89
Caulobacter crescentus NA1000 0.71 CCNA_00752 3-hydroxybutyryl-CoA dehydrogenase 0.56 CCNA_03636 biotin synthase low > 66
Caulobacter crescentus NA1000 Δfur 0.71 CCNA_00752 3-hydroxybutyryl-CoA dehydrogenase 0.56 CCNA_03636 biotin synthase low > 67
Magnetospirillum magneticum AMB-1 0.70 AMB_RS19750 3-hydroxybutyryl-CoA dehydrogenase 0.57 AMB_RS13865 biotin synthase — —
Phaeobacter inhibens DSM 17395 0.70 PGA1_c01220 putative 3-hydroxybutyryl-CoA dehydrogenase 0.64 PGA1_c09120 biotin synthase BioB 0.34 62
Sphingomonas koreensis DSMZ 15582 0.54 Ga0059261_2534 3-hydroxyacyl-CoA dehydrogenase 0.59 Ga0059261_3989 biotin synthase (EC 2.8.1.6) low > 68
Pontibacter actiniarum KMM 6156, DSM 19842 0.54 CA264_06590 3-hydroxybutyryl-CoA dehydrogenase 0.51 CA264_02425 biotin synthase BioB low > 74
Pseudomonas fluorescens GW456-L13 0.50 PfGW456L13_3873 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) 0.58 PfGW456L13_1147 Biotin synthase (EC 2.8.1.6) low > 87
Pseudomonas sp. RS175 0.50 PFR28_02062 3-hydroxybutyryl-CoA dehydrogenase 0.58 PFR28_04103 Biotin synthase low > 88
Dechlorosoma suillum PS 0.50 Dsui_2330 3-hydroxyacyl-CoA dehydrogenase 0.56 Dsui_1297 biotin synthetase low > 51
Acidovorax sp. GW101-3H11 0.50 Ac3H11_4658 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) 0.50 Ac3H11_2272 Biotin synthase (EC 2.8.1.6) low > 79
Variovorax sp. SCN45 0.49 GFF3603 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) 0.50 GFF937 Biotin synthase (EC 2.8.1.6) low > 127
Mucilaginibacter yixingensis YX-36 DSM 26809 0.49 ABZR88_RS02750 3-hydroxyacyl-CoA dehydrogenase family protein 0.51 ABZR88_RS10190 biotin synthase BioB low > 71
Variovorax sp. OAS795 0.49 ABID97_RS00810 3-hydroxybutyryl-CoA dehydrogenase 0.49 ABID97_RS13955 biotin synthase BioB — —
Pseudomonas fluorescens FW300-N1B4 0.49 Pf1N1B4_5134 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) 0.59 Pf1N1B4_2487 Biotin synthase (EC 2.8.1.6) — —
Pedobacter sp. GW460-11-11-14-LB5 0.49 CA265_RS07715 3-hydroxybutyryl-CoA dehydrogenase 0.51 CA265_RS09475 biotin synthase BioB low > 88
Pseudomonas fluorescens FW300-N2E3 0.49 AO353_27535 3-hydroxybutyryl-CoA dehydrogenase 0.58 AO353_07525 biotin synthase low > 101
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF376 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) 0.54 GFF3992 Biotin synthase (EC 2.8.1.6) low > 90
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS24305 3-hydroxybutyryl-CoA dehydrogenase 0.56 RR42_RS00940 biotin synthase low > 128
Pseudomonas putida KT2440 0.49 PP_3755 3-hydroxybutyryl-CoA dehydrogenase 0.59 PP_0362 Biotin synthase low > 96
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_1722 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) 0.58 Pf6N2E2_4759 Biotin synthase (EC 2.8.1.6) low > 103
Ralstonia solanacearum GMI1000 0.48 RS_RS01200 3-hydroxybutyryl-CoA dehydrogenase 0.55 RS_RS01305 biotin synthase — —
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS10370 3-hydroxybutyryl-CoA dehydrogenase 0.55 RALBFv3_RS10465 biotin synthase BioB low > 76
Ralstonia solanacearum UW163 0.48 UW163_RS03210 3-hydroxybutyryl-CoA dehydrogenase 0.55 UW163_RS03115 biotin synthase BioB — —
Paraburkholderia sabiae LMG 24235 0.48 QEN71_RS37855 3-hydroxybutyryl-CoA dehydrogenase 0.56 QEN71_RS01085 biotin synthase BioB — —
Ralstonia solanacearum PSI07 0.48 RPSI07_RS22950 3-hydroxybutyryl-CoA dehydrogenase 0.55 RPSI07_RS22850 biotin synthase BioB low > 81
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_05521 3-hydroxyacyl-CoA dehydrogenase 0.57 H281DRAFT_02097 biotin synthase low > 103
Ralstonia sp. UNC404CL21Col 0.46 ABZR87_RS06125 3-hydroxybutyryl-CoA dehydrogenase 0.54 ABZR87_RS06265 biotin synthase BioB low > 80
Echinicola vietnamensis KMM 6221, DSM 17526 0.46 Echvi_3304 3-hydroxyacyl-CoA dehydrogenase 0.53 Echvi_2566 biotin synthetase low > 79
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_29995 3-hydroxybutyryl-CoA dehydrogenase 0.58 AO356_14135 biotin synthase low > 104
Fusobacterium nucleatum SB010 0.41 HUW76_05010 3-hydroxybutyryl-CoA dehydrogenase 0.25 HUW76_05115 biotin synthase BioB low > 35
Mycobacterium tuberculosis H37Rv 0.39 Rv0468 3-hydroxybutyryl-CoA dehydrogenase FadB2 (beta-hydroxybutyryl-CoA dehydrogenase) (BHBD) 0.25 Rv1589 Probable biotin synthetase BioB low > 58
Marinobacter adhaerens HP15 0.37 HP15_48 3-hydroxybutyryl-CoA dehydrogenase 0.61 HP15_2486 biotin synthase low > 73
Escherichia fergusonii Becca 0.34 EFB2_01907 3-hydroxybutyryl-CoA dehydrogenase 0.57 EFB2_03330 Biotin synthase low > 86
Escherichia coli Nissle 1917 0.34 ECOLIN_RS11575 colibactin biosynthesis dehydrogenase ClbD 0.57 ECOLIN_RS04130 biotin synthase BioB — —
Rahnella sp. WP5 0.25 EX31_RS16685 3-hydroxyacyl-CoA dehydrogenase family protein 0.57 EX31_RS23695 biotin synthase BioB low > 89

Not shown: 7 genomes with orthologs for TX73_024670 only; 55 genomes with orthologs for TX73_010535 only