Conservation of cofitness between SMc00094 and SMc04235 in Sinorhizobium meliloti 1021

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sinorhizobium meliloti 1021 1.0 SMc00094 betaine aldehyde dehydrogenase 1.0 SMc04235 tRNA-dihydrouridine synthase A 0.63 12
Rhizobium sp. OAE497 0.91 ABIE40_RS04520 betaine-aldehyde dehydrogenase 0.58 ABIE40_RS10895 tRNA dihydrouridine(20/20a) synthase DusA low > 107
Agrobacterium fabrum C58 0.87 Atu0829 betaine aldehyde dehydrogenase 0.56 Atu1515 hypothetical protein low > 89
Phaeobacter inhibens DSM 17395 0.68 PGA1_c21670 betaine aldehyde dehydrogenase BetB 0.43 PGA1_c19230 tRNA-dihydrouridine synthase A 0.17 42
Alteromonas macleodii MIT1002 0.55 MIT1002_02908 Betaine aldehyde dehydrogenase 0.39 MIT1002_03387 putative tRNA-dihydrouridine synthase low > 70
Burkholderia phytofirmans PsJN 0.55 BPHYT_RS25160 NAD/NADP-dependent betaine aldehyde dehydrogenase 0.36 BPHYT_RS08700 tRNA-dihydrouridine synthase A low > 109
Marinobacter adhaerens HP15 0.54 HP15_3626 betaine aldehyde dehydrogenase 0.38 HP15_2240 tRNA-dihydrouridine synthase, TIM-barrel, YjbN 0.30 32
Paraburkholderia graminis OAS925 0.54 ABIE53_006148 betaine-aldehyde dehydrogenase 0.36 ABIE53_001975 tRNA-dihydrouridine synthase A low > 113
Paraburkholderia bryophila 376MFSha3.1 0.53 H281DRAFT_02464 betaine aldehyde dehydrogenase 0.36 H281DRAFT_00766 tRNA-U16,U17-dihydrouridine synthase low > 103
Azospirillum sp. SherDot2 0.53 MPMX19_01458 NAD/NADP-dependent betaine aldehyde dehydrogenase 0.44 MPMX19_00670 tRNA-dihydrouridine(20/20a) synthase low > 112
Paraburkholderia sabiae LMG 24235 0.53 QEN71_RS08175 betaine-aldehyde dehydrogenase 0.36 QEN71_RS22650 tRNA dihydrouridine(20/20a) synthase DusA low > 153
Klebsiella michiganensis M5al 0.52 BWI76_RS07615 betaine-aldehyde dehydrogenase 0.41 BWI76_RS01900 tRNA-dihydrouridine synthase A low > 92
Pseudomonas fluorescens SBW25-INTG 0.51 PFLU_RS27990 betaine-aldehyde dehydrogenase 0.38 PFLU_RS07810 tRNA dihydrouridine(20/20a) synthase DusA low > 109
Pseudomonas fluorescens SBW25 0.51 PFLU_RS27990 betaine-aldehyde dehydrogenase 0.38 PFLU_RS07810 tRNA dihydrouridine(20/20a) synthase DusA low > 109
Pseudomonas simiae WCS417 0.51 PS417_26340 betaine-aldehyde dehydrogenase 0.38 PS417_07740 tRNA-dihydrouridine synthase A low > 88
Dickeya dadantii 3937 0.51 DDA3937_RS13265 betaine-aldehyde dehydrogenase 0.40 DDA3937_RS17480 tRNA dihydrouridine(20/20a) synthase DusA low > 74
Serratia liquefaciens MT49 0.50 IAI46_07715 betaine-aldehyde dehydrogenase 0.40 IAI46_22970 tRNA dihydrouridine(20/20a) synthase DusA low > 86
Rahnella sp. WP5 0.50 EX31_RS18820 betaine-aldehyde dehydrogenase 0.40 EX31_RS11865 tRNA dihydrouridine(20/20a) synthase DusA low > 89
Pseudomonas putida KT2440 0.50 PP_5063 betaine aldehyde dehydrogenase, NAD-dependent 0.41 PP_2169 tRNA-dihydrouridine synthase A 0.27 27
Pseudomonas stutzeri RCH2 0.50 Psest_2634 glycine betaine aldehyde dehydrogenase 0.39 Psest_2706 tRNA dihydrouridine synthase A low > 67
Pectobacterium carotovorum WPP14 0.50 HER17_RS08390 betaine-aldehyde dehydrogenase 0.41 HER17_RS03680 tRNA dihydrouridine(20/20a) synthase DusA low > 75
Escherichia coli Nissle 1917 0.50 ECOLIN_RS02055 betaine-aldehyde dehydrogenase 0.40 ECOLIN_RS23355 tRNA dihydrouridine(20/20a) synthase DusA low > 55
Enterobacter asburiae PDN3 0.50 EX28DRAFT_2387 betaine-aldehyde dehydrogenase 0.41 EX28DRAFT_4263 tRNA dihydrouridine synthase A low > 76
Pseudomonas fluorescens GW456-L13 0.50 PfGW456L13_1083 Betaine aldehyde dehydrogenase (EC 1.2.1.8) 0.36 PfGW456L13_3987 tRNA dihydrouridine synthase A low > 87
Pseudomonas fluorescens FW300-N1B4 0.50 Pf1N1B4_2417 Betaine aldehyde dehydrogenase (EC 1.2.1.8) 0.39 Pf1N1B4_57 tRNA dihydrouridine synthase A low > 87
Enterobacter sp. TBS_079 0.50 MPMX20_01229 NAD/NADP-dependent betaine aldehyde dehydrogenase 0.42 MPMX20_00265 tRNA-dihydrouridine(20/20a) synthase low > 85
Pseudomonas fluorescens FW300-N2E2 0.50 Pf6N2E2_4679 Betaine aldehyde dehydrogenase (EC 1.2.1.8) 0.39 Pf6N2E2_2257 tRNA dihydrouridine synthase A low > 103
Pseudomonas fluorescens FW300-N2E3 0.50 AO353_07805 betaine-aldehyde dehydrogenase 0.39 AO353_00295 tRNA-dihydrouridine synthase A low > 101
Pantoea sp. MT58 0.50 IAI47_08650 betaine-aldehyde dehydrogenase 0.40 IAI47_17865 tRNA dihydrouridine(20/20a) synthase DusA low > 76
Pseudomonas sp. RS175 0.50 PFR28_04167 NAD/NADP-dependent betaine aldehyde dehydrogenase 0.39 PFR28_01143 tRNA-dihydrouridine(20/20a) synthase low > 88
Pseudomonas fluorescens FW300-N2C3 0.50 AO356_13795 betaine-aldehyde dehydrogenase 0.39 AO356_02170 tRNA-dihydrouridine synthase A low > 104
Acinetobacter radioresistens SK82 0.50 MPMX26_02369 NAD/NADP-dependent betaine aldehyde dehydrogenase 0.37 MPMX26_00482 tRNA-dihydrouridine(20/20a) synthase low > 36
Escherichia coli BW25113 0.50 b0312 betB betaine aldehyde dehydrogenase, NAD-dependent (NCBI) 0.40 b4049 dusA tRNA-dihydrouridine synthase A (RefSeq) low > 76
Escherichia coli BL21 0.49 ECD_00268 betaine aldehyde dehydrogenase, NAD-dependent 0.40 ECD_03921 tRNA-dihydrouridine synthase A low > 61
Escherichia coli ECRC102 0.49 NIAGMN_07100 betB betaine-aldehyde dehydrogenase 0.40 NIAGMN_10790 dusA tRNA dihydrouridine(20/20a) synthase DusA — —
Escherichia coli ECRC100 0.49 OKFHMN_09045 betB betaine-aldehyde dehydrogenase 0.40 OKFHMN_12945 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 80
Escherichia coli ECRC101 0.49 MCAODC_28270 betB betaine-aldehyde dehydrogenase 0.41 MCAODC_03455 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 87
Escherichia coli ECRC98 0.49 JDDGAC_12695 betB betaine-aldehyde dehydrogenase 0.40 JDDGAC_16580 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 86
Escherichia coli ECRC99 0.49 KEDOAH_18920 betB betaine-aldehyde dehydrogenase 0.40 KEDOAH_15205 dusA tRNA dihydrouridine(20/20a) synthase DusA — —
Escherichia coli ECOR27 0.49 NOLOHH_01895 betB betaine-aldehyde dehydrogenase 0.40 NOLOHH_05195 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.49 OHPLBJKB_03363 NAD/NADP-dependent betaine aldehyde dehydrogenase 0.40 OHPLBJKB_03994 tRNA-dihydrouridine(20/20a) synthase low > 73
Escherichia coli ECOR38 0.49 HEPCGN_07605 betB betaine-aldehyde dehydrogenase 0.40 HEPCGN_11560 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 87
Escherichia coli ECRC62 0.49 BNILDI_00020 betB betaine-aldehyde dehydrogenase 0.40 BNILDI_06330 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 75
Pseudomonas syringae pv. syringae B728a 0.49 Psyr_4733 betaine aldehyde dehydrogenase 0.41 Psyr_1936 tRNA-U16,U17-dihydrouridine synthase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.49 Psyr_4733 betaine aldehyde dehydrogenase 0.41 Psyr_1936 tRNA-U16,U17-dihydrouridine synthase low > 86
Escherichia fergusonii Becca 0.49 EFB2_03723 NAD/NADP-dependent betaine aldehyde dehydrogenase 0.40 EFB2_04556 tRNA-dihydrouridine(20/20a) synthase low > 86
Xanthomonas campestris pv. campestris strain 8004 0.48 Xcc-8004.965.1 Betaine aldehyde dehydrogenase (EC 1.2.1.8) 0.40 Xcc-8004.5010.1 tRNA dihydrouridine synthase A low > 74
Castellaniella sp019104865 MT123 0.36 ABCV34_RS09305 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 0.33 ABCV34_RS04335 tRNA dihydrouridine(20/20a) synthase DusA low > 48
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF1827 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase (EC 1.2.1.60) 0.37 GFF4791 tRNA dihydrouridine synthase A low > 90
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.35 GFF3279 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase (EC 1.2.1.60) 0.40 GFF1418 tRNA dihydrouridine synthase A (EC 1.-.-.-) low > 78

Not shown: 1 genomes with orthologs for SMc00094 only; 34 genomes with orthologs for SMc04235 only