Conservation of cofitness between RS_RS08300 and RS_RS02405 in Ralstonia solanacearum GMI1000

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Ralstonia solanacearum GMI1000 1.0 RS_RS08300 two-component sensor histidine kinase 1.0 RS_RS02405 class II glutamine amidotransferase 0.37 16
Ralstonia solanacearum IBSBF1503 0.96 RALBFv3_RS01420 two-component sensor histidine kinase 1.00 RALBFv3_RS11575 class II glutamine amidotransferase low > 76
Ralstonia solanacearum UW163 0.96 UW163_RS14730 two-component sensor histidine kinase 1.00 UW163_RS02010 class II glutamine amidotransferase — —
Ralstonia solanacearum PSI07 0.96 RPSI07_RS16065 two-component sensor histidine kinase 0.99 RPSI07_RS21635 class II glutamine amidotransferase low > 81
Ralstonia sp. UNC404CL21Col 0.95 ABZR87_RS13215 ATP-binding protein 0.96 ABZR87_RS07540 class II glutamine amidotransferase low > 80
Cupriavidus basilensis FW507-4G11 0.72 RR42_RS07880 histidine kinase 0.89 RR42_RS02595 glutamine amidotransferase low > 128
Paraburkholderia bryophila 376MFSha3.1 0.54 H281DRAFT_00885 two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ 0.78 H281DRAFT_04266 glutamine amidotransferase low > 103
Paraburkholderia graminis OAS925 0.54 ABIE53_002100 two-component system osmolarity sensor histidine kinase EnvZ 0.78 ABIE53_003506 putative glutamine amidotransferase low > 113
Burkholderia phytofirmans PsJN 0.54 BPHYT_RS09310 sensor histidine kinase 0.76 BPHYT_RS16680 glutamine amidotransferase low > 109
Paraburkholderia sabiae LMG 24235 0.54 QEN71_RS22035 ATP-binding protein 0.78 QEN71_RS26860 class II glutamine amidotransferase low > 153
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS10755 sensor histidine kinase 0.61 HSERO_RS24040 glutamine amidotransferase — —
Variovorax sp. OAS795 0.38 ABID97_RS17270 ATP-binding protein 0.59 ABID97_RS04635 class II glutamine amidotransferase low > 91
Castellaniella sp019104865 MT123 0.38 ABCV34_RS08590 ATP-binding protein 0.65 ABCV34_RS06215 class II glutamine amidotransferase low > 48
Variovorax sp. SCN45 0.38 GFF409 Osmolarity sensory histidine kinase EnvZ 0.58 GFF6320 Putative glutamine amidotransferase YafJ low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.37 GFF4931 Osmolarity sensory histidine kinase EnvZ 0.55 GFF3024 Glutamine amidotransferase, class-II low > 90
Dechlorosoma suillum PS 0.32 Dsui_2400 signal transduction histidine kinase 0.59 Dsui_1425 putative glutamine amidotransferase low > 51
Shewanella loihica PV-4 0.22 Shew_3638 envZ osmolarity sensor protein (RefSeq) 0.46 Shew_2107 glutamine amidotransferase, class-II (RefSeq) — —
Shewanella sp. ANA-3 0.22 Shewana3_4018 envZ osmolarity sensor protein (RefSeq) 0.44 Shewana3_2322 glutamine amidotransferase, class-II (RefSeq) low > 73
Shewanella oneidensis MR-1 0.22 SO4634 envZ osmolarity sensor protein EnvZ (NCBI ptt file) 0.45 SO2535 hypothetical amidotransferase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.22 Sama_3511 envZ osmolarity sensor protein (RefSeq) 0.44 Sama_1869 amidotransferase (RefSeq) low > 62
Pantoea sp. MT58 0.19 IAI47_01825 two-component system sensor histidine kinase EnvZ 0.47 IAI47_15185 class II glutamine amidotransferase low > 76
Pectobacterium carotovorum WPP14 0.19 HER17_RS01705 two-component system sensor histidine kinase EnvZ 0.46 HER17_RS04650 class II glutamine amidotransferase low > 75
Acinetobacter radioresistens SK82 0.19 MPMX26_02839 Osmolarity sensor protein EnvZ 0.61 MPMX26_02412 Putative glutamine amidotransferase YafJ low > 36
Serratia liquefaciens MT49 0.19 IAI46_23785 two-component system sensor histidine kinase EnvZ 0.46 IAI46_04345 class II glutamine amidotransferase low > 86
Klebsiella michiganensis M5al 0.18 BWI76_RS26670 two-component sensor histidine kinase 0.46 BWI76_RS05480 class II glutamine amidotransferase low > 92
Rahnella sp. WP5 0.18 EX31_RS04795 two-component system sensor histidine kinase EnvZ 0.46 EX31_RS21015 class II glutamine amidotransferase low > 89
Enterobacter asburiae PDN3 0.18 EX28DRAFT_4139 Signal transduction histidine kinase 0.47 EX28DRAFT_2666 Predicted glutamine amidotransferase low > 76
Escherichia coli ECOR38 0.18 HEPCGN_15850 envZ two-component system sensor histidine kinase EnvZ 0.47 HEPCGN_07875 yafJ Putative glutamine amidotransferase YafJ low > 87
Enterobacter sp. TBS_079 0.18 MPMX20_04291 Osmolarity sensor protein EnvZ 0.48 MPMX20_00912 Putative glutamine amidotransferase YafJ low > 85
Escherichia coli Nissle 1917 0.18 ECOLIN_RS19450 two-component system sensor histidine kinase EnvZ 0.46 ECOLIN_RS01755 class II glutamine amidotransferase low > 55
Escherichia fergusonii Becca 0.18 EFB2_00424 Osmolarity sensor protein EnvZ 0.47 EFB2_03794 Putative glutamine amidotransferase YafJ low > 86
Dickeya dianthicola ME23 0.18 DZA65_RS20835 two-component system sensor histidine kinase EnvZ 0.45 DZA65_RS17745 class II glutamine amidotransferase low > 75
Escherichia coli ECRC98 0.18 JDDGAC_20670 envZ two-component system sensor histidine kinase EnvZ 0.46 JDDGAC_13395 yafJ class II glutamine amidotransferase low > 86
Escherichia coli ECRC100 0.18 OKFHMN_17040 envZ two-component system sensor histidine kinase EnvZ 0.46 OKFHMN_09770 yafJ class II glutamine amidotransferase low > 80
Escherichia coli ECRC101 0.18 MCAODC_07570 envZ two-component system sensor histidine kinase EnvZ 0.46 MCAODC_00290 yafJ class II glutamine amidotransferase low > 87
Escherichia coli ECRC62 0.18 BNILDI_02690 envZ two-component system sensor histidine kinase EnvZ 0.47 BNILDI_00335 yafJ Putative glutamine amidotransferase YafJ low > 75
Escherichia coli BW25113 0.18 b3404 envZ osmolarity sensor protein (NCBI) 0.47 b0223 yafJ predicted amidotransfease (NCBI) low > 76
Escherichia coli ECRC102 0.18 NIAGMN_14810 envZ two-component system sensor histidine kinase EnvZ 0.46 NIAGMN_07630 yafJ class II glutamine amidotransferase — —
Escherichia coli ECRC99 0.18 KEDOAH_11100 envZ two-component system sensor histidine kinase EnvZ 0.46 KEDOAH_18385 yafJ class II glutamine amidotransferase — —
Escherichia coli ECOR27 0.18 NOLOHH_08830 envZ two-component system sensor histidine kinase EnvZ 0.47 NOLOHH_02140 yafJ Putative glutamine amidotransferase YafJ low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.18 OHPLBJKB_00299 Osmolarity sensor protein EnvZ 0.47 OHPLBJKB_03416 Putative glutamine amidotransferase YafJ low > 73
Dickeya dianthicola 67-19 0.18 HGI48_RS19745 two-component system sensor histidine kinase EnvZ 0.46 HGI48_RS16655 class II glutamine amidotransferase low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.18 GFF614 Osmolarity sensory histidine kinase EnvZ 0.46 GFF4102 Predicted glutamine amidotransferase low > 78
Dickeya dadantii 3937 0.18 DDA3937_RS19615 two-component system sensor histidine kinase EnvZ 0.46 DDA3937_RS16585 class II glutamine amidotransferase low > 74
Escherichia coli BL21 0.18 ECD_03256 sensory histidine kinase in two-component regulatory system with OmpR 0.46 ECD_00218 type 2 glutamine amidotransferase family protein low > 61
Erwinia tracheiphila SCR3 0.17 LU632_RS22935 envZ two-component system sensor histidine kinase EnvZ 0.46 LU632_RS01140 class II glutamine amidotransferase low > 74
Marinobacter adhaerens HP15 0.15 HP15_2960 two-component sensor 0.41 HP15_3871 glutamine amidotransferase class-II low > 73

Not shown: 4 genomes with orthologs for RS_RS08300 only; 19 genomes with orthologs for RS_RS02405 only