| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Cupriavidus basilensis FW507-4G11 | 1.0 | RR42_RS17675 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 1.0 | RR42_RS18840 | | 2-alkenal reductase | 0.49 | 10 |
| Ralstonia solanacearum PSI07 | 0.79 | RPSI07_RS11275 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.83 | RPSI07_RS10490 | | PDZ domain-containing protein | low | > 81 |
| Ralstonia solanacearum GMI1000 | 0.79 | RS_RS13915 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.83 | RS_RS14690 | | PDZ domain-containing protein | low | > 80 |
| Ralstonia solanacearum IBSBF1503 | 0.78 | RALBFv3_RS05970 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.83 | RALBFv3_RS06745 | | 2-alkenal reductase | low | > 76 |
| Ralstonia solanacearum UW163 | 0.78 | UW163_RS07655 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.83 | UW163_RS06870 | | 2-alkenal reductase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.78 | ABZR87_RS01630 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.83 | ABZR87_RS02400 | | Do family serine endopeptidase | low | > 80 |
| Paraburkholderia sabiae LMG 24235 | 0.73 | QEN71_RS27145 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.74 | QEN71_RS27795 | | Do family serine endopeptidase | low | > 153 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.72 | H281DRAFT_06288 | | UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase | 0.73 | H281DRAFT_05667 | | serine protease DegQ | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.72 | ABIE53_003563 | | UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase | 0.73 | ABIE53_003687 | | serine protease DegQ | 0.40 | 107 |
| Burkholderia phytofirmans PsJN | 0.72 | BPHYT_RS16990 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.73 | BPHYT_RS17640 | | 2-alkenal reductase | low | > 109 |
| Herbaspirillum seropedicae SmR1 | 0.71 | HSERO_RS01965 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.64 | HSERO_RS20260 | | 2-alkenal reductase | low | > 78 |
| Methylophilus sp. DMC18 | 0.69 | GFF2071 | | UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-m eso-2,6-diaminoheptandioate ligase | 0.56 | GFF1575 | | Periplasmic pH-dependent serine endoprotease DegQ | — | — |
| Dechlorosoma suillum PS | 0.67 | Dsui_0384 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.59 | Dsui_1426 | | periplasmic serine protease, Do/DeqQ family | low | > 51 |
| Variovorax sp. SCN45 | 0.61 | GFF4445 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase (EC 6.3.2.-) | 0.57 | GFF5365 | | Outer membrane stress sensor protease DegS | low | > 127 |
| Castellaniella sp019104865 MT123 | 0.60 | ABCV34_RS10690 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.50 | ABCV34_RS12650 | | trypsin-like peptidase domain-containing protein | low | > 48 |
| Pseudomonas simiae WCS417 | 0.59 | PS417_24800 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.50 | PS417_03705 | | 2-alkenal reductase | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.59 | PFLU_RS26735 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.48 | PFLU_RS03755 | | PDZ domain-containing protein | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.59 | PFLU_RS26735 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.48 | PFLU_RS03755 | | PDZ domain-containing protein | low | > 109 |
| Variovorax sp. OAS795 | 0.59 | ABID97_RS06355 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.54 | ABID97_RS23065 | | trypsin-like peptidase domain-containing protein | low | > 91 |
| Pseudomonas lactucae CFBP13502 | 0.59 | GEMAOFIL_05114 | | UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase | 0.48 | GEMAOFIL_00947 | | Serine endoprotease DegS | low | > 93 |
| Pseudomonas sp. RS175 | 0.59 | PFR28_03883 | | UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase | 0.50 | PFR28_00191 | | Serine endoprotease DegS | low | > 88 |
| Pseudomonas aeruginosa PA14 | 0.59 | IKLFDK_20730 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase | 0.48 | IKLFDK_01860 | | protease AlgW | low | > 100 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.59 | GFF583 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) | 0.56 | GFF1300 | | Outer membrane stress sensor protease DegS | — | — |
| Pseudomonas putida KT2440 | 0.58 | PP_0547 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.49 | PP_1301 | | quality control serine endoprotease DegS | low | > 96 |
| Pseudomonas fluorescens FW300-N2E2 | 0.58 | Pf6N2E2_4982 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) | 0.50 | Pf6N2E2_5255 | | Outer membrane stress sensor protease DegS | 0.23 | 49 |
| Pseudomonas sp. S08-1 | 0.58 | OH686_09400 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.51 | OH686_08460 | | Outer membrane stress sensor protease DegS | low | > 80 |
| Pseudomonas fluorescens FW300-N2E3 | 0.58 | AO353_06550 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.49 | AO353_05090 | | 2-alkenal reductase | low | > 101 |
| Pseudomonas sp. BP01 | 0.58 | JOY50_RS23075 | mpl | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.49 | JOY50_RS15285 | algW | Do family serine endopeptidase AlgW | low | > 84 |
| Pseudomonas sp. DMC3 | 0.58 | GFF3860 | | UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-m eso-2,6-diaminoheptandioate ligase | 0.50 | GFF1846 | | Serine endoprotease DegS | low | > 89 |
| Pseudomonas fluorescens GW456-L13 | 0.58 | PfGW456L13_1344 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) | 0.50 | PfGW456L13_4998 | | Outer membrane stress sensor protease DegS | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.58 | AO356_15235 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.50 | AO356_16655 | | 2-alkenal reductase | low | > 104 |
| Pseudomonas fluorescens FW300-N1B4 | 0.58 | Pf1N1B4_2676 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) | 0.50 | Pf1N1B4_1061 | | Outer membrane stress sensor protease DegS | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.58 | Psyr_0630 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.47 | Psyr_4130 | | Peptidase S1, chymotrypsin:PDZ/DHR/GLGF | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.58 | Psyr_0630 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.47 | Psyr_4130 | | Peptidase S1, chymotrypsin:PDZ/DHR/GLGF | low | > 86 |
| Pseudomonas sp. SVBP6 | 0.58 | COO64_RS15685 | mpl | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.50 | COO64_RS11715 | algW | Do family serine endopeptidase AlgW | low | > 93 |
| Pseudomonas stutzeri RCH2 | 0.58 | Psest_0673 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase | 0.46 | Psest_3296 | | Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain | low | > 67 |
| Acidovorax sp. GW101-3H11 | 0.54 | Ac3H11_4032 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) | 0.57 | Ac3H11_4743 | | Outer membrane stress sensor protease DegS | — | — |
| Acinetobacter baumannii LAC-4 | 0.50 | RR41_RS18930 | | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | 0.41 | RR41_RS05700 | | trypsin-like peptidase domain-containing protein | — | — |
| Acinetobacter radioresistens SK82 | 0.48 | MPMX26_03053 | | UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase | 0.40 | MPMX26_00998 | | Serine endoprotease DegS | low | > 36 |
Not shown: 46 genomes with orthologs for RR42_RS17675 only; 1 genomes with orthologs for RR42_RS18840 only