Conservation of cofitness between RR42_RS02080 and RR42_RS15155 in Cupriavidus basilensis FW507-4G11

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS02080 ribosome hibernation promoting factor 1.0 RR42_RS15155 CoA-transferase 0.53 13
Ralstonia solanacearum GMI1000 0.87 RS_RS02015 ribosomal subunit interface protein 0.85 RS_RS04000 CoA transferase low > 80
Ralstonia sp. UNC404CL21Col 0.85 ABZR87_RS07055 ribosome-associated translation inhibitor RaiA 0.85 ABZR87_RS09285 CaiB/BaiF CoA-transferase family protein low > 80
Ralstonia solanacearum IBSBF1503 0.85 RALBFv3_RS11165 ribosomal subunit interface protein 0.83 RALBFv3_RS13205 CoA transferase low > 76
Ralstonia solanacearum UW163 0.85 UW163_RS02415 ribosomal subunit interface protein 0.83 UW163_RS00365 CoA transferase — —
Ralstonia solanacearum PSI07 0.84 RPSI07_RS22135 ribosomal subunit interface protein 0.85 RPSI07_RS20015 CoA transferase low > 81
Paraburkholderia sabiae LMG 24235 0.71 QEN71_RS01750 ribosome-associated translation inhibitor RaiA 0.80 QEN71_RS04980 CaiB/BaiF CoA-transferase family protein low > 153
Burkholderia phytofirmans PsJN 0.70 BPHYT_RS02900 ribosome hibernation promoting factor 0.80 BPHYT_RS13985 CoA transferase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.70 H281DRAFT_01928 sigma 54 modulation protein /SSU ribosomal protein S30P 0.79 H281DRAFT_04444 Crotonobetainyl-CoA:carnitine CoA-transferase CaiB low > 103
Paraburkholderia graminis OAS925 0.69 ABIE53_000717 putative sigma-54 modulation protein 0.78 ABIE53_002964 crotonobetainyl-CoA:carnitine CoA-transferase CaiB-like acyl-CoA transferase low > 113
Acidovorax sp. GW101-3H11 0.64 Ac3H11_681 Ribosome hibernation protein YhbH 0.58 Ac3H11_3532 L-carnitine dehydratase/bile acid-inducible protein F low > 79
Variovorax sp. OAS795 0.63 ABID97_RS04490 ribosome-associated translation inhibitor RaiA 0.57 ABID97_RS03210 CaiB/BaiF CoA-transferase family protein low > 91
Variovorax sp. SCN45 0.62 GFF7293 Ribosome hibernation promoting factor Hpf 0.59 GFF3432 L-carnitine dehydratase/bile acid-inducible protein F low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.62 GFF2612 Ribosome hibernation protein YhbH 0.62 GFF2926 L-carnitine dehydratase/bile acid-inducible protein F low > 90
Castellaniella sp019104865 MT123 0.47 ABCV34_RS14345 ribosome-associated translation inhibitor RaiA 0.63 ABCV34_RS01800 CaiB/BaiF CoA-transferase family protein low > 48
Shewanella amazonensis SB2B 0.44 Sama_3089 ribosomal subunit interface protein (RefSeq) 0.50 Sama_3300 acyl-CoA transferase/carnitine dehydratase (RefSeq) low > 62
Pseudomonas stutzeri RCH2 0.44 Psest_3314 ribosomal subunit interface protein 0.66 Psest_3829 Predicted acyl-CoA transferases/carnitine dehydratase low > 67
Pseudomonas fluorescens GW456-L13 0.43 PfGW456L13_5015 Ribosome hibernation protein YhbH 0.65 PfGW456L13_553 L-carnitine dehydratase/bile acid-inducible protein F low > 87
Pseudomonas simiae WCS417 0.42 PS417_04340 ribosome hibernation promoting factor HPF 0.65 PS417_00585 CoA-transferase low > 88
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_4148 sigma 54 modulation protein / SSU ribosomal protein S30P 0.65 Psyr_5013 L-carnitine dehydratase/bile acid-inducible protein F low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_4148 sigma 54 modulation protein / SSU ribosomal protein S30P 0.65 Psyr_5013 L-carnitine dehydratase/bile acid-inducible protein F low > 86
Marinobacter adhaerens HP15 0.42 HP15_2443 sigma 54 modulation protein/ribosomal protein S30EA 0.35 HP15_2609 acyl-CoA transferase/carnitine dehydratase low > 73
Pseudomonas sp. S08-1 0.42 OH686_08550 Ribosome hibernation promoting factor Hpf 0.63 OH686_11705 Uncharacterized protein low > 80
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS04395 ribosome-associated translation inhibitor RaiA 0.64 PFLU_RS00570 CoA transferase low > 109
Pseudomonas fluorescens SBW25 0.41 PFLU_RS04395 ribosome-associated translation inhibitor RaiA 0.64 PFLU_RS00570 CoA transferase low > 109
Pseudomonas sp. RS175 0.41 PFR28_00172 Ribosome hibernation promoting factor 0.65 PFR28_04729 Acetyl-CoA:oxalate CoA-transferase low > 88
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_05185 hypothetical protein 0.64 AO353_11105 CoA-transferase low > 101
Pseudomonas putida KT2440 0.40 PP_0951 Ribosome hibernation promoting factor 0.65 PP_0159 putative CoA-transferase family III low > 96
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_1081 Ribosome hibernation protein YhbH 0.65 Pf1N1B4_1815 L-carnitine dehydratase/bile acid-inducible protein F low > 87
Pseudomonas fluorescens FW300-N2E2 0.40 Pf6N2E2_3268 Ribosome hibernation protein YhbH 0.65 Pf6N2E2_4035 L-carnitine dehydratase/bile acid-inducible protein F low > 103
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_07040 hypothetical protein 0.65 AO356_10845 succinyl-CoA-glutarate CoA-transferase (EC 2.8.3.13) (from data) low > 104
Rhodanobacter denitrificans MT42 0.29 LRK55_RS12570 ribosome-associated translation inhibitor RaiA 0.36 LRK55_RS07155 CaiB/BaiF CoA-transferase family protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS12870 ribosome-associated translation inhibitor RaiA 0.36 LRK54_RS07425 CoA transferase low > 59
Acinetobacter radioresistens SK82 0.26 MPMX26_02591 Ribosome hibernation promoting factor 0.60 MPMX26_01599 Acetyl-CoA:oxalate CoA-transferase — —

Not shown: 37 genomes with orthologs for RR42_RS02080 only; 11 genomes with orthologs for RR42_RS15155 only