Conservation of cofitness between RR42_RS03280 and RR42_RS15050 in Cupriavidus basilensis FW507-4G11

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS03280 LysR family transcriptional regulator 1.0 RR42_RS15050 DNA polymerase I 0.48 16
Sinorhizobium meliloti 1021 0.62 SMa1782 LysR family transcriptional regulator 0.38 SMc02850 DNA polymerase I low > 103
Shewanella sp. ANA-3 0.39 Shewana3_4390 LysR family transcriptional regulator (RefSeq) 0.51 Shewana3_4109 DNA polymerase I (RefSeq) — —
Castellaniella sp019104865 MT123 0.32 ABCV34_RS09070 LysR family transcriptional regulator 0.57 ABCV34_RS02195 DNA polymerase I low > 48
Pseudomonas sp. RS175 0.31 PFR28_05088 HTH-type transcriptional regulator YhaJ 0.49 PFR28_04624 DNA polymerase I low > 88
Pseudomonas fluorescens FW300-N2E3 0.30 AO353_12995 LysR family transcriptional regulator 0.49 AO353_10930 DNA polymerase I 0.29 31
Shewanella loihica PV-4 0.30 Shew_1149 LysR family transcriptional regulator (RefSeq) 0.49 Shew_3714 DNA polymerase I (RefSeq) low > 60
Pseudomonas putida KT2440 0.30 PP_4929 Transcriptional regulator, LysR family 0.50 PP_0123 DNA polymerase I, 5 low > 96
Pseudomonas fluorescens FW300-N1B4 0.30 Pf1N1B4_1450 LysR family transcriptional regulator PA4989 0.48 Pf1N1B4_1875 DNA polymerase I (EC 2.7.7.7) — —
Pseudomonas fluorescens GW456-L13 0.30 PfGW456L13_190 LysR family transcriptional regulator PA4989 0.48 PfGW456L13_594 DNA polymerase I (EC 2.7.7.7) low > 87
Pseudomonas fluorescens FW300-N2C3 0.30 AO356_08825 LysR family transcriptional regulator 0.49 AO356_11465 DNA polymerase I low > 104
Pseudomonas fluorescens FW300-N2E2 0.30 Pf6N2E2_3647 LysR family transcriptional regulator PA4989 0.49 Pf6N2E2_4162 DNA polymerase I (EC 2.7.7.7) low > 103
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS02415 LysR family transcriptional regulator 0.49 PFLU_RS00395 DNA polymerase I low > 109
Pseudomonas fluorescens SBW25 0.27 PFLU_RS02415 LysR family transcriptional regulator 0.49 PFLU_RS00395 DNA polymerase I low > 109
Pseudomonas simiae WCS417 0.27 PS417_02340 LysR family transcriptional regulator 0.49 PS417_00405 DNA polymerase I low > 88
Klebsiella michiganensis M5al 0.27 BWI76_RS23450 LysR family transcriptional regulator 0.48 BWI76_RS00355 DNA polymerase I low > 92
Variovorax sp. SCN45 0.25 GFF595 Transcriptional regulator, LysR family 0.59 GFF4006 DNA polymerase I (EC 2.7.7.7) low > 127
Rahnella sp. WP5 0.25 EX31_RS20055 LysR family transcriptional regulator 0.48 EX31_RS15905 DNA polymerase I low > 89
Ralstonia solanacearum IBSBF1503 0.25 RALBFv3_RS16640 LysR family transcriptional regulator 0.78 RALBFv3_RS03750 DNA polymerase I low > 76
Ralstonia solanacearum UW163 0.25 UW163_RS17995 LysR family transcriptional regulator 0.78 UW163_RS09920 DNA polymerase I — —
Enterobacter sp. TBS_079 0.25 MPMX20_03720 HTH-type transcriptional regulator HdfR 0.49 MPMX20_04601 DNA polymerase I low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.25 GFF1331 LysR-family transcriptional regulator STM3020 0.49 GFF2216 DNA polymerase I (EC 2.7.7.7) low > 78
Enterobacter asburiae PDN3 0.24 EX28DRAFT_2924 Transcriptional regulator 0.49 EX28DRAFT_4343 DNA polymerase I (EC 2.7.7.7) — —
Pantoea sp. MT58 0.24 IAI47_14415 LysR family transcriptional regulator 0.49 IAI47_00430 DNA polymerase I low > 76
Pectobacterium carotovorum WPP14 0.24 HER17_RS17115 LysR family transcriptional regulator 0.49 HER17_RS21470 DNA polymerase I — —
Ralstonia solanacearum GMI1000 0.24 RS_RS24420 LysR family transcriptional regulator 0.78 RS_RS11195 DNA polymerase I low > 80
Serratia liquefaciens MT49 0.24 IAI46_18235 LysR family transcriptional regulator 0.50 IAI46_24985 DNA polymerase I low > 86
Dickeya dadantii 3937 0.24 DDA3937_RS04545 LysR family transcriptional regulator 0.50 DDA3937_RS00105 DNA polymerase I — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.23 Psyr_3357 transcriptional regulator, LysR family 0.47 Psyr_0270 DNA polymerase I 0.49 51
Pseudomonas syringae pv. syringae B728a 0.23 Psyr_3357 transcriptional regulator, LysR family 0.47 Psyr_0270 DNA polymerase I low > 86
Dickeya dianthicola 67-19 0.23 HGI48_RS04505 LysR family transcriptional regulator 0.50 HGI48_RS21260 DNA polymerase I — —
Dickeya dianthicola ME23 0.23 DZA65_RS04425 LysR family transcriptional regulator 0.49 DZA65_RS22235 DNA polymerase I — —
Ralstonia sp. UNC404CL21Col 0.21 ABZR87_RS17685 LysR family transcriptional regulator 0.78 ABZR87_RS15680 DNA polymerase I 0.29 33
Acinetobacter radioresistens SK82 0.21 MPMX26_01752 hypothetical protein 0.42 MPMX26_00574 DNA polymerase I 0.45 23
Variovorax sp. OAS795 0.21 ABID97_RS03460 LysR family transcriptional regulator 0.59 ABID97_RS09180 DNA polymerase I low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.19 GFF2844 LysR family transcriptional regulator PA2758 0.57 GFF5584 DNA polymerase I (EC 2.7.7.7) low > 90
Alteromonas macleodii MIT1002 0.17 MIT1002_02374 HTH-type transcriptional activator AllS 0.50 MIT1002_00014 DNA polymerase I low > 70
Acidovorax sp. GW101-3H11 0.16 Ac3H11_3277 LysR family transcriptional regulator PA2758 0.57 Ac3H11_1648 DNA polymerase I (EC 2.7.7.7) — —
Shewanella oneidensis MR-1 0.15 SO0989 transcriptional regulator, LysR family (NCBI ptt file) 0.50 SO4669 polA DNA polymerase I (NCBI ptt file) — —

Not shown: 1 genomes with orthologs for RR42_RS03280 only; 60 genomes with orthologs for RR42_RS15050 only