Conservation of cofitness between RR42_RS07425 and RR42_RS13880 in Cupriavidus basilensis FW507-4G11

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS07425 IclR family transcriptional regulator 1.0 RR42_RS13880 AMP-dependent synthetase 0.53 7
Ralstonia sp. UNC404CL21Col 0.92 ABZR87_RS13415 IclR family transcriptional regulator 0.90 ABZR87_RS14360 acetate--CoA ligase low > 80
Ralstonia solanacearum UW163 0.91 UW163_RS14925 IclR family transcriptional regulator 0.89 UW163_RS11280 acetate--CoA ligase — —
Ralstonia solanacearum PSI07 0.91 RPSI07_RS15870 IclR family transcriptional regulator 0.89 RPSI07_RS14880 acetate--CoA ligase low > 81
Ralstonia solanacearum IBSBF1503 0.91 RALBFv3_RS01615 IclR family transcriptional regulator 0.89 RALBFv3_RS02445 acetate--CoA ligase low > 76
Ralstonia solanacearum GMI1000 0.91 RS_RS08105 IclR family transcriptional regulator 0.88 RS_RS09815 acetyl-coenzyme A synthetase — —
Paraburkholderia bryophila 376MFSha3.1 0.80 H281DRAFT_00471 transcriptional regulator, IclR family 0.82 H281DRAFT_04953 acetyl-coenzyme A synthetase 0.33 25
Paraburkholderia graminis OAS925 0.80 ABIE53_002788 IclR family KDG regulon transcriptional repressor 0.82 ABIE53_001664 acetyl-CoA synthetase 0.50 63
Burkholderia phytofirmans PsJN 0.80 BPHYT_RS12815 IclR family transcriptional regulator 0.81 BPHYT_RS07000 acetyl-CoA synthetase low > 109
Paraburkholderia sabiae LMG 24235 0.80 QEN71_RS05750 IclR family transcriptional regulator 0.83 QEN71_RS23765 acetate--CoA ligase low > 153
Herbaspirillum seropedicae SmR1 0.72 HSERO_RS08180 IclR family transcriptional regulator 0.82 HSERO_RS07770 acetyl-CoA synthetase — —
Acidovorax sp. GW101-3H11 0.69 Ac3H11_532 Predicted Lactate-responsive regulator, IclR family 0.77 Ac3H11_951 Acetyl-coenzyme A synthetase (EC 6.2.1.1) low > 79
Variovorax sp. SCN45 0.68 GFF1167 Predicted Lactate-responsive regulator, IclR family 0.78 GFF475 Acetyl-CoA synthetase (EC 6.2.1.1) low > 127
Variovorax sp. OAS795 0.68 ABID97_RS14920 IclR family transcriptional regulator 0.77 ABID97_RS17525 acetate--CoA ligase 0.28 81
Hydrogenophaga sp. GW460-11-11-14-LB1 0.67 GFF4283 Predicted Lactate-responsive regulator, IclR family 0.78 GFF4107 Acetyl-coenzyme A synthetase (EC 6.2.1.1) low > 90
Castellaniella sp019104865 MT123 0.62 ABCV34_RS07905 IclR family transcriptional regulator 0.73 ABCV34_RS00680 acetate--CoA ligase low > 48
Dechlorosoma suillum PS 0.54 Dsui_0127 transcriptional regulator 0.76 Dsui_2003 acetate--CoA ligase 0.43 18
Escherichia coli BW25113 0.25 b0272 yagI CP4-6 prophage; predicted DNA-binding transcriptional regulator (NCBI) 0.48 b4069 acs acetyl-coenzyme A synthetase (NCBI) low > 76
Enterobacter sp. TBS_079 0.25 MPMX20_00555 HTH-type transcriptional regulator XynR 0.47 MPMX20_00291 Acetyl-coenzyme A synthetase low > 85
Enterobacter asburiae PDN3 0.24 EX28DRAFT_3458 transcriptional regulator, IclR family 0.47 EX28DRAFT_4232 acetate--CoA ligase low > 76
Dickeya dadantii 3937 0.24 DDA3937_RS18500 IclR family transcriptional regulator 0.48 DDA3937_RS03480 acetate--CoA ligase low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.23 GFF436 Transcriptional regulator, IclR family 0.47 GFF1452 Acetyl-coenzyme A synthetase (EC 6.2.1.1) low > 78
Dickeya dianthicola 67-19 0.23 HGI48_RS18425 IclR family transcriptional regulator 0.47 HGI48_RS03580 acetate--CoA ligase low > 71
Dickeya dianthicola ME23 0.23 DZA65_RS19560 helix-turn-helix domain-containing protein 0.47 DZA65_RS03695 acetate--CoA ligase low > 75
Escherichia coli ECOR38 0.23 HEPCGN_14790 yiaJ IclR family transcriptional regulator YiaJ 0.48 HEPCGN_11455 acs acetate--CoA ligase low > 87
Serratia liquefaciens MT49 0.23 IAI46_20925 IclR family transcriptional regulator 0.47 IAI46_01405 acetate--CoA ligase low > 86
Escherichia fergusonii Becca 0.23 EFB2_00233 DNA-binding transcriptional repressor YiaJ 0.48 EFB2_04520 Acetyl-coenzyme A synthetase low > 86
Escherichia coli Nissle 1917 0.23 ECOLIN_RS20440 IclR family transcriptional regulator YiaJ 0.48 ECOLIN_RS23550 acetate--CoA ligase low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_00130 DNA-binding transcriptional repressor YiaJ 0.48 OHPLBJKB_03971 Acetyl-coenzyme A synthetase low > 73
Escherichia coli BL21 0.23 ECD_03426 transcriptional repressor for the yiaKLMNO-lyxK-sgbHUE operon 0.48 ECD_03941 acetyl-CoA synthetase low > 61
Escherichia coli ECOR27 0.23 NOLOHH_07845 yiaJ IclR family transcriptional regulator YiaJ 0.48 NOLOHH_05080 acs acetate--CoA ligase low > 75
Escherichia coli ECRC62 0.23 BNILDI_03700 yiaJ IclR family transcriptional regulator YiaJ 0.48 BNILDI_06445 acs acetate--CoA ligase low > 75
Erwinia tracheiphila SCR3 0.23 LU632_RS04225 IclR family transcriptional regulator 0.46 LU632_RS23305 acs acetate--CoA ligase low > 74
Klebsiella michiganensis M5al 0.22 BWI76_RS27075 IclR family transcriptional regulator 0.48 BWI76_RS02095 acetyl-coenzyme A synthetase 0.33 56
Sinorhizobium meliloti 1021 0.20 SM_b20682 IclR family transcriptional regulator 0.46 SMc04093 acetyl-CoA synthetase low > 103
Pseudomonas simiae WCS417 0.18 PS417_21320 transcriptional regulator 0.47 PS417_21750 acetyl-CoA synthetase low > 88
Pseudomonas fluorescens FW300-N2E3 0.18 AO353_01260 transcriptional regulator 0.46 AO353_03060 Acetyl-coenzyme A synthetase (EC 6.2.1.1) (from data) low > 101
Pseudomonas fluorescens SBW25 0.17 PFLU_RS22940 IclR family transcriptional regulator 0.47 PFLU_RS23355 acetate--CoA ligase low > 109
Pseudomonas fluorescens SBW25-INTG 0.17 PFLU_RS22940 IclR family transcriptional regulator 0.47 PFLU_RS23355 acetate--CoA ligase 0.23 25
Pseudomonas fluorescens FW300-N1B4 0.17 Pf1N1B4_396 D-galactonate regulator, IclR family 0.47 Pf1N1B4_3430 Acetyl-coenzyme A synthetase (EC 6.2.1.1) low > 87
Pseudomonas fluorescens FW300-N2E2 0.17 Pf6N2E2_5979 D-galactonate regulator, IclR family 0.47 Pf6N2E2_5659 Acetyl-coenzyme A synthetase (EC 6.2.1.1) low > 103
Pseudomonas sp. RS175 0.17 PFR28_02983 HTH-type transcriptional regulator XynR 0.47 PFR28_03289 Acetyl-coenzyme A synthetase low > 88
Shewanella sp. ANA-3 0.14 Shewana3_1275 IclR family transcriptional regulator (RefSeq) 0.48 Shewana3_2523 acetyl-CoA synthetase (RefSeq) low > 73

Not shown: 0 genomes with orthologs for RR42_RS07425 only; 52 genomes with orthologs for RR42_RS13880 only