Conservation of cofitness between RR42_RS04735 and RR42_RS04260 in Cupriavidus basilensis FW507-4G11

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS04735 hypothetical protein 1.0 RR42_RS04260 chemotaxis protein 0.51 11
Ralstonia solanacearum PSI07 0.83 RPSI07_RS13685 YebC/PmpR family DNA-binding transcriptional regulator 0.75 RPSI07_RS20665 chemotaxis protein — —
Ralstonia solanacearum GMI1000 0.83 RS_RS10990 YebC/PmpR family DNA-binding transcriptional regulator 0.75 RS_RS03375 chemotaxis protein low > 80
Ralstonia solanacearum IBSBF1503 0.83 RALBFv3_RS03540 YebC/PmpR family DNA-binding transcriptional regulator 0.76 RALBFv3_RS12590 chemotaxis protein — —
Ralstonia solanacearum UW163 0.83 UW163_RS10130 YebC/PmpR family DNA-binding transcriptional regulator 0.76 UW163_RS00975 chemotaxis protein — —
Ralstonia sp. UNC404CL21Col 0.81 ABZR87_RS15405 YebC/PmpR family DNA-binding transcriptional regulator 0.77 ABZR87_RS08590 methyl-accepting chemotaxis protein low > 80
Herbaspirillum seropedicae SmR1 0.79 HSERO_RS17750 transcriptional regulator 0.38 HSERO_RS19170 chemotaxis protein — —
Dechlorosoma suillum PS 0.72 Dsui_0489 DNA-binding regulatory protein, YebC/PmpR family 0.43 Dsui_0657 methyl-accepting chemotaxis protein low > 51
Variovorax sp. SCN45 0.65 GFF303 Probable transcriptional regulatory protein YebC 0.44 GFF2154 twitching motility protein PilJ low > 127
Variovorax sp. OAS795 0.65 ABID97_RS16740 YebC/PmpR family DNA-binding transcriptional regulator 0.44 ABID97_RS24690 methyl-accepting chemotaxis protein low > 91
Acidovorax sp. GW101-3H11 0.64 Ac3H11_2422 FIG000859: hypothetical protein 0.47 Ac3H11_3986 twitching motility protein PilJ — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.62 GFF4523 FIG000859: hypothetical protein YebC 0.46 GFF645 twitching motility protein PilJ low > 90
Kangiella aquimarina DSM 16071 0.60 B158DRAFT_1123 DNA-binding regulatory protein, YebC/PmpR family 0.27 B158DRAFT_0185 Methyl-accepting chemotaxis protein low > 40
Pseudomonas sp. RS175 0.57 PFR28_03415 Transcriptional regulatory protein PmpR 0.28 PFR28_04228 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_18010 hypothetical protein 0.29 AO356_13495 chemotaxis protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_5534 FIG000859: hypothetical protein YebC 0.29 Pf6N2E2_4616 type IV pilus biogenesis protein PilJ low > 103
Pseudomonas stutzeri RCH2 0.56 Psest_1494 DNA-binding regulatory protein, YebC/PmpR family 0.29 Psest_0300 Methyl-accepting chemotaxis protein — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_1407 Protein of unknown function DUF28 0.28 Psyr_0491 chemotaxis sensory transducer low > 86
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_1850 FIG000859: hypothetical protein YebC 0.29 PfGW456L13_1025 type IV pilus biogenesis protein PilJ low > 87
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_1407 Protein of unknown function DUF28 0.28 Psyr_0491 chemotaxis sensory transducer low > 86
Pseudomonas sp. S08-1 0.54 OH686_19120 Probable transcriptional regulatory protein YebC 0.29 OH686_10895 type IV pilus biogenesis protein PilJ low > 80
Marinobacter adhaerens HP15 0.54 HP15_2043 protein YebC 0.29 HP15_3516 methyl-accepting chemotaxis sensory transducer low > 73
Pseudomonas simiae WCS417 0.54 PS417_22460 hypothetical protein 0.28 PS417_26655 chemotaxis protein — —
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS24100 YebC/PmpR family DNA-binding transcriptional regulator 0.28 PFLU_RS28300 chemotaxis protein low > 109
Pseudomonas fluorescens SBW25 0.53 PFLU_RS24100 YebC/PmpR family DNA-binding transcriptional regulator 0.28 PFLU_RS28300 chemotaxis protein low > 109
Lysobacter sp. OAE881 0.53 ABIE51_RS05035 YebC/PmpR family DNA-binding transcriptional regulator 0.25 ABIE51_RS05230 methyl-accepting chemotaxis protein low > 62
Pseudomonas putida KT2440 0.53 PP_1214 putative transcriptional regulatory protein 0.29 PP_4989 Protein PilJ low > 96
Pseudomonas fluorescens FW300-N1B4 0.52 Pf1N1B4_640 FIG000859: hypothetical protein YebC 0.28 Pf1N1B4_2357 type IV pilus biogenesis protein PilJ — —
Pseudomonas fluorescens FW300-N2E3 0.52 AO353_03595 hypothetical protein 0.28 AO353_08090 chemotaxis protein low > 101
Acinetobacter radioresistens SK82 0.51 MPMX26_01851 putative transcriptional regulatory protein YebC 0.25 MPMX26_02510 hypothetical protein low > 36
Xanthomonas campestris pv. campestris strain 8004 0.51 Xcc-8004.1434.1 FIG000859: hypothetical protein YebC 0.26 Xcc-8004.1505.1 pilus biogenesis protein low > 74
Rhodanobacter denitrificans MT42 0.49 LRK55_RS04700 YebC/PmpR family DNA-binding transcriptional regulator 0.24 LRK55_RS03950 methyl-accepting chemotaxis protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.49 LRK54_RS04920 YebC/PmpR family DNA-binding transcriptional regulator 0.24 LRK54_RS04180 methyl-accepting chemotaxis protein low > 59
Rhodanobacter sp. FW510-T8 0.48 OKGIIK_01830 tACO1 YebC/PmpR family DNA-binding transcriptional regulator 0.24 OKGIIK_11055 chemotaxis protein low > 52
Dyella japonica UNC79MFTsu3.2 0.44 ABZR86_RS10850 YebC/PmpR family DNA-binding transcriptional regulator 0.24 ABZR86_RS10350 methyl-accepting chemotaxis protein — —

Not shown: 67 genomes with orthologs for RR42_RS04735 only; 0 genomes with orthologs for RR42_RS04260 only