Conservation of cofitness between QEN71_RS03190 and QEN71_RS28660 in Paraburkholderia sabiae LMG 24235

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Paraburkholderia sabiae LMG 24235 1.0 QEN71_RS03190 amino acid permease 1.0 QEN71_RS28660 5-oxoprolinase subunit PxpA 0.67 5
Burkholderia phytofirmans PsJN 0.88 BPHYT_RS15500 aromatic amino acid transporter 0.92 BPHYT_RS18635 LamB/YcsF family protein low > 109
Paraburkholderia graminis OAS925 0.86 ABIE53_003265 aromatic amino acid transport protein AroP 0.93 ABIE53_000049 UPF0271 protein low > 113
Paraburkholderia bryophila 376MFSha3.1 0.84 H281DRAFT_04042 phenylacetate transporter (from data) 0.93 H281DRAFT_05811 UPF0271 protein low > 103
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_03549 Aromatic amino acid transport protein AroP 0.61 OHPLBJKB_03004 hypothetical protein low > 73
Escherichia coli ECRC62 0.71 BNILDI_08750 aroP aromatic amino acid transporter AroP 0.61 BNILDI_21375 pxpA 5-oxoprolinase subunit PxpA low > 75
Escherichia coli BW25113 0.71 b0112 aroP aromatic amino acid transporter (NCBI) 0.61 b0713 ybgL hypothetical protein (NCBI) low > 76
Escherichia coli ECOR27 0.71 NOLOHH_02860 aroP aromatic amino acid transporter AroP 0.61 NOLOHH_23380 pxpA 5-oxoprolinase subunit PxpA low > 75
Escherichia coli ECOR38 0.71 HEPCGN_08495 aroP aromatic amino acid transporter AroP 0.61 HEPCGN_01215 pxpA 5-oxoprolinase subunit PxpA 0.45 72
Serratia liquefaciens MT49 0.71 IAI46_21335 amino acid permease 0.58 IAI46_06225 5-oxoprolinase subunit PxpA low > 86
Escherichia coli BL21 0.71 ECD_00111 aromatic amino acid transporter 0.61 ECD_00673 UPF0271 family protein low > 61
Escherichia coli ECRC99 0.71 KEDOAH_17640 aroP aromatic amino acid transporter AroP 0.61 KEDOAH_20970 pxpA 5-oxoprolinase subunit PxpA — —
Dickeya dadantii 3937 0.71 DDA3937_RS17935 amino acid permease 0.56 DDA3937_RS06425 5-oxoprolinase subunit PxpA low > 74
Escherichia coli ECRC100 0.71 OKFHMN_10515 aroP aromatic amino acid transporter AroP 0.61 OKFHMN_06995 pxpA 5-oxoprolinase subunit PxpA low > 80
Dickeya dianthicola 67-19 0.71 HGI48_RS17580 amino acid permease 0.55 HGI48_RS06470 5-oxoprolinase subunit PxpA low > 71
Escherichia coli ECRC102 0.71 NIAGMN_08365 aroP aromatic amino acid transporter AroP 0.61 NIAGMN_05050 pxpA 5-oxoprolinase subunit PxpA — —
Escherichia coli Nissle 1917 0.71 ECOLIN_RS00600 aromatic amino acid transporter AroP 0.61 ECOLIN_RS03815 5-oxoprolinase subunit PxpA low > 55
Escherichia coli ECRC98 0.71 JDDGAC_14110 aroP aromatic amino acid transporter AroP 0.61 JDDGAC_10650 pxpA 5-oxoprolinase subunit PxpA low > 86
Escherichia coli ECRC101 0.71 MCAODC_01030 aroP aromatic amino acid transporter AroP 0.61 MCAODC_26215 pxpA 5-oxoprolinase subunit PxpA low > 87
Dickeya dianthicola ME23 0.71 DZA65_RS19010 amino acid permease 0.55 DZA65_RS06815 5-oxoprolinase subunit PxpA low > 75
Pectobacterium carotovorum WPP14 0.71 HER17_RS03280 amino acid permease 0.57 HER17_RS14975 5-oxoprolinase subunit PxpA low > 75
Escherichia fergusonii Becca 0.71 EFB2_03937 Aromatic amino acid transport protein AroP 0.61 EFB2_03390 5-oxoprolinase subunit A low > 86
Klebsiella michiganensis M5al 0.70 BWI76_RS04870 aromatic amino acid transporter AroP 0.59 BWI76_RS08360 LamB/YcsF family protein low > 92
Enterobacter asburiae PDN3 0.70 EX28DRAFT_3707 Gamma-aminobutyrate permease and related permeases 0.57 EX28DRAFT_2274 Uncharacterized proteins, homologs of lactam utilization protein B low > 76
Pantoea sp. MT58 0.69 IAI47_15820 aromatic amino acid transporter AroP 0.58 IAI47_13795 5-oxoprolinase subunit PxpA low > 76
Rahnella sp. WP5 0.69 EX31_RS03490 aromatic amino acid transporter AroP 0.59 EX31_RS23395 5-oxoprolinase subunit PxpA low > 89
Enterobacter sp. TBS_079 0.69 MPMX20_00805 Aromatic amino acid transport protein AroP 0.54 MPMX20_01347 5-oxoprolinase subunit A low > 85
Pseudomonas simiae WCS417 0.68 PS417_23700 aromatic amino acid transporter 0.37 PS417_21910 LamB/YcsF family protein low > 88
Pseudomonas fluorescens FW300-N2E3 0.68 AO353_18555 aromatic amino acid transporter 0.35 AO353_28820 lactam utilization protein LamB low > 101
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF124 Aromatic amino acid transport protein AroP 0.60 GFF4618 Lactam utilization protein LamB low > 78
Pseudomonas fluorescens GW456-L13 0.68 PfGW456L13_4291 L-tryptophan transporter (from data) 0.35 PfGW456L13_4478 Lactam utilization protein LamB 0.58 17
Pseudomonas fluorescens SBW25 0.68 PFLU_RS25510 amino acid permease 0.36 PFLU_RS09840 5-oxoprolinase subunit PxpA low > 109
Pseudomonas fluorescens SBW25-INTG 0.68 PFLU_RS25510 amino acid permease 0.36 PFLU_RS09840 5-oxoprolinase subunit PxpA low > 109
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_18530 L-tyrosine transporter (from data) 0.35 AO356_04335 hypothetical protein low > 104
Pseudomonas stutzeri RCH2 0.67 Psest_1697 Gamma-aminobutyrate permease and related permeases 0.35 Psest_1542 Uncharacterized proteins, homologs of lactam utilization protein B low > 67
Cupriavidus basilensis FW507-4G11 0.67 RR42_RS33495 L-phenylalanine:H+ symporter AroP (from data) 0.63 RR42_RS00650 hypothetical protein low > 128
Pseudomonas sp. S08-1 0.67 OH686_21130 Aromatic amino acid transport protein AroP 0.36 OH686_08750 Lactam utilization protein LamB low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.67 Psyr_3580 aromatic amino acid:proton symporter, AAT family 0.45 Psyr_0497 LamB/YcsF low > 86
Pseudomonas syringae pv. syringae B728a 0.67 Psyr_3580 aromatic amino acid:proton symporter, AAT family 0.45 Psyr_0497 LamB/YcsF low > 86
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_3559 Aromatic amino acid transport protein AroP 0.35 Pf1N1B4_3366 Lactam utilization protein LamB low > 87
Pseudomonas sp. RS175 0.67 PFR28_03311 Aromatic amino acid transport protein AroP 0.35 PFR28_00728 5-oxoprolinase subunit A 3 low > 88
Pseudomonas fluorescens FW300-N2E2 0.66 Pf6N2E2_5633 Aromatic amino acid transport protein AroP 0.34 Pf6N2E2_2708 Lactam utilization protein LamB low > 103
Pseudomonas putida KT2440 0.66 PP_0927 aromatic amino acid transport protein 0.35 PP_2920 putative nitrogen-containing compound degradation enzyme low > 96
Castellaniella sp019104865 MT123 0.52 ABCV34_RS10320 amino acid permease 0.41 ABCV34_RS01510 5-oxoprolinase subunit PxpA low > 48
Ralstonia solanacearum IBSBF1503 0.44 RALBFv3_RS20930 amino acid permease 0.68 RALBFv3_RS03425 LamB/YcsF family protein — —
Ralstonia solanacearum UW163 0.44 UW163_RS22065 amino acid permease 0.68 UW163_RS10245 LamB/YcsF family protein — —
Rhodanobacter sp. FW510-T8 0.41 OKGIIK_09870 Amino acid permease 0.49 OKGIIK_04730 5-oxoprolinase subunit A low > 52
Ralstonia sp. UNC404CL21Col 0.40 ABZR87_RS09765 amino acid permease 0.68 ABZR87_RS15325 5-oxoprolinase subunit PxpA low > 80
Agrobacterium fabrum C58 0.32 Atu3792 L-asparagine permease 0.45 Atu3910 LamB/YcsF family protein low > 89
Ralstonia solanacearum PSI07 0.26 RPSI07_RS16340 amino acid permease 0.69 RPSI07_RS13790 LamB/YcsF family protein low > 81
Ralstonia solanacearum GMI1000 0.26 RS_RS08880 amino acid permease 0.68 RS_RS10885 LamB/YcsF family protein 0.40 10

Not shown: 8 genomes with orthologs for QEN71_RS03190 only; 20 genomes with orthologs for QEN71_RS28660 only