Conservation of cofitness between QEN71_RS26190 and QEN71_RS06455 in Paraburkholderia sabiae LMG 24235

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Paraburkholderia sabiae LMG 24235 1.0 QEN71_RS26190 DUF883 family protein 1.0 QEN71_RS06455 RIP metalloprotease RseP 0.71 4
Paraburkholderia graminis OAS925 0.97 ABIE53_000897 ElaB/YqjD/DUF883 family membrane-anchored ribosome-binding protein 0.79 ABIE53_002496 regulator of sigma E protease low > 113
Paraburkholderia bryophila 376MFSha3.1 0.97 H281DRAFT_04735 Membrane-anchored ribosome-binding protein, inhibits growth in stationary phase, ElaB/YqjD/DUF883 family 0.81 H281DRAFT_00617 site-2 protease. Metallo peptidase. MEROPS family M50B — —
Burkholderia phytofirmans PsJN 0.96 BPHYT_RS03770 membrane protein 0.82 BPHYT_RS12105 zinc metalloprotease — —
Ralstonia sp. UNC404CL21Col 0.63 ABZR87_RS09085 DUF883 family protein 0.39 ABZR87_RS11860 RIP metalloprotease RseP low > 80
Cupriavidus basilensis FW507-4G11 0.58 RR42_RS15410 membrane protein 0.43 RR42_RS11840 zinc metalloprotease low > 128
Dechlorosoma suillum PS 0.58 Dsui_0871 hypothetical protein 0.36 Dsui_2687 RIP metalloprotease RseP low > 51
Ralstonia solanacearum PSI07 0.57 RPSI07_RS20215 DUF883 domain-containing protein 0.39 RPSI07_RS17065 RIP metalloprotease RseP low > 81
Ralstonia solanacearum IBSBF1503 0.56 RALBFv3_RS13010 DUF883 domain-containing protein 0.41 RALBFv3_RS00410 RIP metalloprotease RseP 0.53 4
Ralstonia solanacearum UW163 0.56 UW163_RS00555 DUF883 domain-containing protein 0.41 UW163_RS13740 RIP metalloprotease RseP — —
Ralstonia solanacearum GMI1000 0.56 RS_RS03795 DUF883 domain-containing protein 0.39 RS_RS07080 RIP metalloprotease RseP low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF1248 Probable transmembrane protein 0.37 GFF4908 Membrane-associated zinc metalloprotease low > 90
Pseudomonas fluorescens GW456-L13 0.43 PfGW456L13_2266 Probable transmembrane protein 0.33 PfGW456L13_4701 Membrane-associated zinc metalloprotease low > 87
Pseudomonas putida KT2440 0.43 PP_2105 conserved protein of unknown function 0.32 PP_1598 regulatory intramembrane protein RIP zinc protease low > 96
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS05990 hypothetical protein 0.41 HSERO_RS10910 peptidase low > 78
Pseudomonas fluorescens FW300-N1B4 0.42 Pf1N1B4_245 Probable transmembrane protein 0.34 Pf1N1B4_3091 Membrane-associated zinc metalloprotease — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.40 Psyr_2118 protein of unknown function DUF883 0.33 Psyr_1350 site-2 protease, Metallo peptidase, MEROPS family M50B — —
Pseudomonas fluorescens SBW25 0.40 PFLU_RS08585 DUF883 domain-containing protein 0.33 PFLU_RS06310 sigma E protease regulator RseP low > 109
Pseudomonas syringae pv. syringae B728a 0.40 Psyr_2118 protein of unknown function DUF883 0.33 Psyr_1350 site-2 protease, Metallo peptidase, MEROPS family M50B low > 86
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS08585 DUF883 domain-containing protein 0.33 PFLU_RS06310 sigma E protease regulator RseP low > 109
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_19215 hypothetical protein 0.33 AO353_16495 zinc metallopeptidase RseP low > 101
Pseudomonas simiae WCS417 0.39 PS417_08630 membrane protein 0.33 PS417_06245 zinc metallopeptidase RseP — —
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_2432 Probable transmembrane protein 0.34 Pf6N2E2_3062 Membrane-associated zinc metalloprotease low > 103
Pseudomonas sp. RS175 0.38 PFR28_00997 putative protein YqjD 0.34 PFR28_00403 Regulator of sigma-E protease RseP low > 88
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_03025 hypothetical protein 0.34 AO356_06005 zinc metallopeptidase RseP low > 104
Castellaniella sp019104865 MT123 0.35 ABCV34_RS15385 DUF883 family protein 0.35 ABCV34_RS04075 RIP metalloprotease RseP low > 48
Dickeya dadantii 3937 0.34 DDA3937_RS02800 DUF883 domain-containing protein 0.29 DDA3937_RS05150 sigma E protease regulator RseP low > 74
Dickeya dianthicola ME23 0.33 DZA65_RS02930 DUF883 domain-containing protein 0.29 DZA65_RS05490 sigma E protease regulator RseP low > 75
Dickeya dianthicola 67-19 0.33 HGI48_RS02775 DUF883 domain-containing protein 0.29 HGI48_RS05150 sigma E protease regulator RseP low > 71
Rahnella sp. WP5 0.33 EX31_RS12645 DUF883 domain-containing protein 0.31 EX31_RS13000 sigma E protease regulator RseP — —
Pectobacterium carotovorum WPP14 0.33 HER17_RS18745 YqjD family protein 0.30 HER17_RS16300 sigma E protease regulator RseP low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.31 GFF3195 Uncharacterized membrane protein YqjD 0.32 GFF46 Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage — —
Enterobacter sp. TBS_079 0.31 MPMX20_04007 putative protein YqjD 0.31 MPMX20_00860 Regulator of sigma-E protease RseP — —
Enterobacter asburiae PDN3 0.31 EX28DRAFT_3166 Uncharacterized conserved protein 0.32 EX28DRAFT_3764 RIP metalloprotease RseP — —
Klebsiella michiganensis M5al 0.31 BWI76_RS24760 membrane protein 0.32 BWI76_RS05250 zinc metallopeptidase RseP — —
Escherichia coli ECRC98 0.31 JDDGAC_22120 yqjD Uncharacterized protein YqjD 0.33 JDDGAC_13770 rseP sigma E protease regulator RseP — —
Escherichia coli BW25113 0.31 b3098 yqjD hypothetical protein (NCBI) 0.33 b0176 yaeL zinc metallopeptidase (NCBI) — —
Escherichia coli ECRC102 0.31 NIAGMN_16250 yqjD Uncharacterized protein YqjD 0.33 NIAGMN_08025 rseP sigma E protease regulator RseP — —
Escherichia coli ECRC99 0.31 KEDOAH_09660 yqjD Uncharacterized protein YqjD 0.33 KEDOAH_17980 rseP sigma E protease regulator RseP — —
Escherichia coli ECRC101 0.31 MCAODC_09000 yqjD Uncharacterized protein YqjD 0.33 MCAODC_00690 rseP sigma E protease regulator RseP — —
Escherichia coli ECRC100 0.31 OKFHMN_18485 yqjD Uncharacterized protein YqjD 0.33 OKFHMN_10175 rseP sigma E protease regulator RseP — —
Escherichia coli ECRC62 0.31 BNILDI_01250 yqjD Uncharacterized protein YqjD 0.33 BNILDI_09150 rseP sigma E protease regulator RseP — —
Escherichia coli Nissle 1917 0.31 ECOLIN_RS17860 YqjD family protein 0.33 ECOLIN_RS00960 sigma E protease regulator RseP — —
Escherichia coli ECOR27 0.31 NOLOHH_10265 yqjD Uncharacterized protein YqjD 0.33 NOLOHH_02520 rseP sigma E protease regulator RseP — —
Escherichia coli ECOR38 0.31 HEPCGN_17320 yqjD Uncharacterized protein YqjD 0.33 HEPCGN_08130 rseP sigma E protease regulator RseP — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.31 OHPLBJKB_00600 putative protein YqjD 0.33 OHPLBJKB_03487 Regulator of sigma-E protease RseP — —
Escherichia coli BL21 0.31 ECD_02967 membrane-anchored ribosome-binding protein 0.33 ECD_00174 inner membrane zinc RIP metalloprotease; RpoE activator, by degrading RseA; cleaved signal peptide endoprotease — —
Escherichia fergusonii Becca 0.31 EFB2_00714 putative protein YqjD 0.33 EFB2_03868 Regulator of sigma-E protease RseP — —
Erwinia tracheiphila SCR3 0.28 LU632_RS02290 YqjD family protein 0.31 LU632_RS19930 rseP sigma E protease regulator RseP low > 74

Not shown: 0 genomes with orthologs for QEN71_RS26190 only; 34 genomes with orthologs for QEN71_RS06455 only