Conservation of cofitness between QEN71_RS26190 and QEN71_RS04575 in Paraburkholderia sabiae LMG 24235

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Paraburkholderia sabiae LMG 24235 1.0 QEN71_RS26190 DUF883 family protein 1.0 QEN71_RS04575 RNA polymerase sigma factor RpoE 0.68 9
Paraburkholderia bryophila 376MFSha3.1 0.97 H281DRAFT_04735 Membrane-anchored ribosome-binding protein, inhibits growth in stationary phase, ElaB/YqjD/DUF883 family 0.99 H281DRAFT_04355 RNA polymerase, sigma-24 subunit, RpoE — —
Paraburkholderia graminis OAS925 0.97 ABIE53_000897 ElaB/YqjD/DUF883 family membrane-anchored ribosome-binding protein 0.99 ABIE53_003043 RNA polymerase sigma-70 factor (ECF subfamily) low > 113
Burkholderia phytofirmans PsJN 0.96 BPHYT_RS03770 membrane protein 0.99 BPHYT_RS14405 RNA polymerase sigma factor RpoE — —
Ralstonia sp. UNC404CL21Col 0.63 ABZR87_RS09085 DUF883 family protein 0.85 ABZR87_RS10165 RNA polymerase sigma factor RpoE 0.33 54
Dechlorosoma suillum PS 0.58 Dsui_0871 hypothetical protein 0.82 Dsui_2453 RNA polymerase sigma factor RpoE — —
Cupriavidus basilensis FW507-4G11 0.58 RR42_RS15410 membrane protein 0.86 RR42_RS14080 RNA polymerase sigma factor RpoE low > 128
Ralstonia solanacearum PSI07 0.57 RPSI07_RS20215 DUF883 domain-containing protein 0.86 RPSI07_RS19015 RNA polymerase sigma factor RpoE low > 81
Ralstonia solanacearum GMI1000 0.56 RS_RS03795 DUF883 domain-containing protein 0.86 RS_RS05225 RNA polymerase sigma factor RpoE low > 80
Ralstonia solanacearum IBSBF1503 0.56 RALBFv3_RS13010 DUF883 domain-containing protein 0.86 RALBFv3_RS14445 RNA polymerase sigma factor RpoE 0.67 1
Ralstonia solanacearum UW163 0.56 UW163_RS00555 DUF883 domain-containing protein 0.86 UW163_RS11910 RNA polymerase sigma factor RpoE — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF1248 Probable transmembrane protein 0.54 GFF3339 RNA polymerase sigma factor RpoE low > 90
Pseudomonas fluorescens GW456-L13 0.43 PfGW456L13_2266 Probable transmembrane protein 0.58 PfGW456L13_4516 RNA polymerase sigma-H factor AlgT low > 87
Pseudomonas putida KT2440 0.43 PP_2105 conserved protein of unknown function 0.58 PP_1427 RNA polymerase sigma E factor low > 96
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS05990 hypothetical protein 0.83 HSERO_RS09625 RNA polymerase sigma factor RpoE — —
Pseudomonas fluorescens FW300-N1B4 0.42 Pf1N1B4_245 Probable transmembrane protein 0.58 Pf1N1B4_3323 RNA polymerase sigma-H factor AlgT — —
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS08585 DUF883 domain-containing protein 0.58 PFLU_RS07230 RNA polymerase sigma factor RpoE low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.40 Psyr_2118 protein of unknown function DUF883 0.58 Psyr_3958 RNA polymerase, sigma-24 subunit, RpoE — —
Pseudomonas syringae pv. syringae B728a 0.40 Psyr_2118 protein of unknown function DUF883 0.58 Psyr_3958 RNA polymerase, sigma-24 subunit, RpoE low > 86
Pseudomonas fluorescens SBW25 0.40 PFLU_RS08585 DUF883 domain-containing protein 0.58 PFLU_RS07230 RNA polymerase sigma factor RpoE low > 109
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_19215 hypothetical protein 0.58 AO353_17625 RNA polymerase subunit sigma low > 101
Pseudomonas simiae WCS417 0.39 PS417_08630 membrane protein 0.58 PS417_07120 RNA polymerase sigma-H factor — —
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_2432 Probable transmembrane protein 0.58 Pf6N2E2_2756 RNA polymerase sigma-H factor AlgT low > 103
Pseudomonas sp. RS175 0.38 PFR28_00997 putative protein YqjD 0.58 PFR28_00690 RNA polymerase sigma-H factor low > 88
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_03025 hypothetical protein 0.58 AO356_04575 RNA polymerase subunit sigma low > 104
Castellaniella sp019104865 MT123 0.35 ABCV34_RS15385 DUF883 family protein 0.69 ABCV34_RS08355 RNA polymerase sigma factor RpoE low > 48
Dickeya dadantii 3937 0.34 DDA3937_RS02800 DUF883 domain-containing protein 0.59 DDA3937_RS15765 RNA polymerase sigma factor RpoE low > 74
Dickeya dianthicola 67-19 0.33 HGI48_RS02775 DUF883 domain-containing protein 0.58 HGI48_RS15850 RNA polymerase sigma factor RpoE low > 71
Dickeya dianthicola ME23 0.33 DZA65_RS02930 DUF883 domain-containing protein 0.58 DZA65_RS16930 RNA polymerase sigma factor RpoE low > 75
Pectobacterium carotovorum WPP14 0.33 HER17_RS18745 YqjD family protein 0.57 HER17_RS05780 RNA polymerase sigma factor RpoE — —
Rahnella sp. WP5 0.33 EX31_RS12645 DUF883 domain-containing protein 0.58 EX31_RS21800 RNA polymerase sigma factor RpoE — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.31 GFF3195 Uncharacterized membrane protein YqjD 0.58 GFF2107 RNA polymerase sigma factor RpoE — —
Enterobacter sp. TBS_079 0.31 MPMX20_04007 putative protein YqjD 0.58 MPMX20_03444 ECF RNA polymerase sigma-E factor — —
Klebsiella michiganensis M5al 0.31 BWI76_RS24760 membrane protein 0.58 BWI76_RS21355 RNA polymerase sigma factor RpoE — —
Enterobacter asburiae PDN3 0.31 EX28DRAFT_3166 Uncharacterized conserved protein 0.58 EX28DRAFT_0072 RNA polymerase sigma factor RpoE — —
Escherichia coli ECOR38 0.31 HEPCGN_17320 yqjD Uncharacterized protein YqjD 0.58 HEPCGN_20520 rpoE RNA polymerase sigma factor RpoE — —
Escherichia coli ECRC98 0.31 JDDGAC_22120 yqjD Uncharacterized protein YqjD 0.58 JDDGAC_25040 rpoE RNA polymerase sigma factor RpoE — —
Escherichia coli ECRC99 0.31 KEDOAH_09660 yqjD Uncharacterized protein YqjD 0.58 KEDOAH_06845 rpoE RNA polymerase sigma factor RpoE — —
Escherichia coli Nissle 1917 0.31 ECOLIN_RS17860 YqjD family protein 0.58 ECOLIN_RS14560 RNA polymerase sigma factor RpoE — —
Escherichia coli ECRC100 0.31 OKFHMN_18485 yqjD Uncharacterized protein YqjD 0.58 OKFHMN_21375 rpoE RNA polymerase sigma factor RpoE — —
Escherichia coli ECRC62 0.31 BNILDI_01250 yqjD Uncharacterized protein YqjD 0.58 BNILDI_11850 rpoE RNA polymerase sigma factor RpoE — —
Escherichia coli BL21 0.31 ECD_02967 membrane-anchored ribosome-binding protein 0.58 ECD_02467 RNA polymerase sigma E factor — —
Escherichia fergusonii Becca 0.31 EFB2_00714 putative protein YqjD 0.58 EFB2_01323 ECF RNA polymerase sigma-E factor — —
Escherichia coli ECRC101 0.31 MCAODC_09000 yqjD Uncharacterized protein YqjD 0.58 MCAODC_11905 rpoE RNA polymerase sigma factor RpoE — —
Escherichia coli ECOR27 0.31 NOLOHH_10265 yqjD Uncharacterized protein YqjD 0.58 NOLOHH_13050 rpoE RNA polymerase sigma factor RpoE — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.31 OHPLBJKB_00600 putative protein YqjD 0.58 OHPLBJKB_01134 ECF RNA polymerase sigma-E factor — —
Escherichia coli ECRC102 0.31 NIAGMN_16250 yqjD Uncharacterized protein YqjD 0.58 NIAGMN_19145 rpoE RNA polymerase sigma factor RpoE — —
Escherichia coli BW25113 0.31 b3098 yqjD hypothetical protein (NCBI) 0.58 b2573 rpoE RNA polymerase, sigma 24 (sigma E) factor (NCBI) — —
Erwinia tracheiphila SCR3 0.28 LU632_RS02290 YqjD family protein 0.58 LU632_RS15425 rpoE RNA polymerase sigma factor RpoE low > 74

Not shown: 0 genomes with orthologs for QEN71_RS26190 only; 34 genomes with orthologs for QEN71_RS04575 only