Conservation of cofitness between QEN71_RS26190 and QEN71_RS01300 in Paraburkholderia sabiae LMG 24235

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Paraburkholderia sabiae LMG 24235 1.0 QEN71_RS26190 DUF883 family protein 1.0 QEN71_RS01300 D-alanyl-D-alanine carboxypeptidase family protein 0.60 15
Paraburkholderia bryophila 376MFSha3.1 0.97 H281DRAFT_04735 Membrane-anchored ribosome-binding protein, inhibits growth in stationary phase, ElaB/YqjD/DUF883 family 0.86 H281DRAFT_02054 penicillin-binding protein 6. Serine peptidase. MEROPS family S11 low > 103
Paraburkholderia graminis OAS925 0.97 ABIE53_000897 ElaB/YqjD/DUF883 family membrane-anchored ribosome-binding protein 0.88 ABIE53_000626 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) low > 113
Burkholderia phytofirmans PsJN 0.96 BPHYT_RS03770 membrane protein 0.87 BPHYT_RS02415 cytochrome C550 — —
Ralstonia sp. UNC404CL21Col 0.63 ABZR87_RS09085 DUF883 family protein 0.56 ABZR87_RS06610 D-alanyl-D-alanine carboxypeptidase family protein low > 80
Cupriavidus basilensis FW507-4G11 0.58 RR42_RS15410 membrane protein 0.58 RR42_RS01680 cytochrome C550 low > 128
Dechlorosoma suillum PS 0.58 Dsui_0871 hypothetical protein 0.48 Dsui_0899 D-alanyl-D-alanine carboxypeptidase low > 51
Ralstonia solanacearum PSI07 0.57 RPSI07_RS20215 DUF883 domain-containing protein 0.57 RPSI07_RS22545 D-alanyl-D-alanine carboxypeptidase low > 81
Ralstonia solanacearum IBSBF1503 0.56 RALBFv3_RS13010 DUF883 domain-containing protein 0.56 RALBFv3_RS10770 D-alanyl-D-alanine carboxypeptidase low > 76
Ralstonia solanacearum UW163 0.56 UW163_RS00555 DUF883 domain-containing protein 0.56 UW163_RS02810 D-alanyl-D-alanine carboxypeptidase — —
Ralstonia solanacearum GMI1000 0.56 RS_RS03795 DUF883 domain-containing protein 0.57 RS_RS01610 D-alanyl-D-alanine carboxypeptidase low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF1248 Probable transmembrane protein 0.42 GFF1806 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) low > 90
Pseudomonas fluorescens GW456-L13 0.43 PfGW456L13_2266 Probable transmembrane protein 0.36 PfGW456L13_1364 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) — —
Pseudomonas putida KT2440 0.43 PP_2105 conserved protein of unknown function 0.36 PP_4803 D-alanyl-D-alanine carboxypeptidase low > 96
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS05990 hypothetical protein 0.49 HSERO_RS21530 cytochrome C550 low > 78
Pseudomonas fluorescens FW300-N1B4 0.42 Pf1N1B4_245 Probable transmembrane protein 0.36 Pf1N1B4_2696 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) — —
Pseudomonas syringae pv. syringae B728a 0.40 Psyr_2118 protein of unknown function DUF883 0.36 Psyr_4361 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.40 Psyr_2118 protein of unknown function DUF883 0.36 Psyr_4361 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 — —
Pseudomonas fluorescens SBW25 0.40 PFLU_RS08585 DUF883 domain-containing protein 0.37 PFLU_RS26635 D-alanyl-D-alanine carboxypeptidase low > 109
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS08585 DUF883 domain-containing protein 0.37 PFLU_RS26635 D-alanyl-D-alanine carboxypeptidase low > 109
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_19215 hypothetical protein 0.37 AO353_06455 D-alanyl-D-alanine carboxypeptidase low > 101
Pseudomonas simiae WCS417 0.39 PS417_08630 membrane protein 0.37 PS417_24705 D-alanyl-D-alanine carboxypeptidase — —
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_2432 Probable transmembrane protein 0.36 Pf6N2E2_5001 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) low > 103
Pseudomonas sp. RS175 0.38 PFR28_00997 putative protein YqjD 0.37 PFR28_03864 D-alanyl-D-alanine carboxypeptidase DacC low > 88
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_03025 hypothetical protein 0.37 AO356_15330 D-alanyl-D-alanine carboxypeptidase low > 104
Castellaniella sp019104865 MT123 0.35 ABCV34_RS15385 DUF883 family protein 0.43 ABCV34_RS13340 D-alanyl-D-alanine carboxypeptidase family protein low > 48
Dickeya dadantii 3937 0.34 DDA3937_RS02800 DUF883 domain-containing protein 0.34 DDA3937_RS09420 serine hydrolase low > 74
Dickeya dianthicola ME23 0.33 DZA65_RS02930 DUF883 domain-containing protein 0.34 DZA65_RS09745 D-alanyl-D-alanine carboxypeptidase low > 75
Dickeya dianthicola 67-19 0.33 HGI48_RS02775 DUF883 domain-containing protein 0.35 HGI48_RS09435 serine hydrolase low > 71
Pectobacterium carotovorum WPP14 0.33 HER17_RS18745 YqjD family protein 0.34 HER17_RS12545 serine hydrolase low > 75
Rahnella sp. WP5 0.33 EX31_RS12645 DUF883 domain-containing protein 0.34 EX31_RS09695 D-alanyl-D-alanine carboxypeptidase low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.31 GFF3195 Uncharacterized membrane protein YqjD 0.32 GFF744 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) low > 78
Enterobacter sp. TBS_079 0.31 MPMX20_04007 putative protein YqjD 0.35 MPMX20_01477 D-alanyl-D-alanine carboxypeptidase DacC low > 85
Enterobacter asburiae PDN3 0.31 EX28DRAFT_3166 Uncharacterized conserved protein 0.35 EX28DRAFT_2127 D-alanyl-D-alanine carboxypeptidase low > 76
Klebsiella michiganensis M5al 0.31 BWI76_RS24760 membrane protein 0.33 BWI76_RS09145 serine-type D-Ala-D-Ala carboxypeptidase — —
Escherichia fergusonii Becca 0.31 EFB2_00714 putative protein YqjD 0.35 EFB2_03267 D-alanyl-D-alanine carboxypeptidase DacC low > 86
Escherichia coli BW25113 0.31 b3098 yqjD hypothetical protein (NCBI) 0.36 b0839 dacC D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a) (NCBI) low > 76
Escherichia coli Nissle 1917 0.31 ECOLIN_RS17860 YqjD family protein 0.35 ECOLIN_RS04460 serine-type D-Ala-D-Ala carboxypeptidase — —
Escherichia coli ECOR38 0.31 HEPCGN_17320 yqjD Uncharacterized protein YqjD 0.35 HEPCGN_01990 dacC serine-type D-Ala-D-Ala carboxypeptidase low > 87
Escherichia coli BL21 0.31 ECD_02967 membrane-anchored ribosome-binding protein 0.36 ECD_00806 D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6a low > 61
Escherichia coli ECRC62 0.31 BNILDI_01250 yqjD Uncharacterized protein YqjD 0.35 BNILDI_20670 dacC serine-type D-Ala-D-Ala carboxypeptidase low > 75
Escherichia coli ECOR27 0.31 NOLOHH_10265 yqjD Uncharacterized protein YqjD 0.35 NOLOHH_22410 dacC serine-type D-Ala-D-Ala carboxypeptidase low > 75
Escherichia coli ECRC98 0.31 JDDGAC_22120 yqjD Uncharacterized protein YqjD 0.35 JDDGAC_09675 dacC serine-type D-Ala-D-Ala carboxypeptidase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.31 OHPLBJKB_00600 putative protein YqjD 0.36 OHPLBJKB_02871 D-alanyl-D-alanine carboxypeptidase DacC low > 73
Escherichia coli ECRC99 0.31 KEDOAH_09660 yqjD Uncharacterized protein YqjD 0.35 KEDOAH_21870 dacC serine-type D-Ala-D-Ala carboxypeptidase — —
Escherichia coli ECRC102 0.31 NIAGMN_16250 yqjD Uncharacterized protein YqjD 0.35 NIAGMN_04085 dacC serine-type D-Ala-D-Ala carboxypeptidase — —
Escherichia coli ECRC101 0.31 MCAODC_09000 yqjD Uncharacterized protein YqjD 0.35 MCAODC_25255 dacC serine-type D-Ala-D-Ala carboxypeptidase low > 87
Escherichia coli ECRC100 0.31 OKFHMN_18485 yqjD Uncharacterized protein YqjD 0.35 OKFHMN_06040 dacC serine-type D-Ala-D-Ala carboxypeptidase low > 80
Erwinia tracheiphila SCR3 0.28 LU632_RS02290 YqjD family protein 0.32 LU632_RS16390 dacA D-alanyl-D-alanine carboxypeptidase DacA low > 74

Not shown: 0 genomes with orthologs for QEN71_RS26190 only; 34 genomes with orthologs for QEN71_RS01300 only