| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
| Pseudomonas syringae pv. syringae B728a | 1.0 | Psyr_0783 | | MCP methyltransferase, CheR-type | 1.0 | Psyr_4757 | | transcriptional regulator, TetR family | 0.46 | 5 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 1.00 | Psyr_0783 | | MCP methyltransferase, CheR-type | 1.00 | Psyr_4757 | | transcriptional regulator, TetR family | low | > 86 |
| Pseudomonas lactucae CFBP13502 | 0.86 | GEMAOFIL_03219 | | Chemotaxis protein methyltransferase | 0.69 | GEMAOFIL_05505 | | hypothetical protein | low | > 93 |
| Pseudomonas sp. RS175 | 0.85 | PFR28_02515 | | Chemotaxis protein methyltransferase | 0.68 | PFR28_04265 | | hypothetical protein | 0.35 | 32 |
| Pseudomonas fluorescens FW300-N2E2 | 0.85 | Pf6N2E2_415 | | Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) | 0.65 | Pf6N2E2_4576 | | Transcriptional regulator, TetR family | low | > 103 |
| Pseudomonas fluorescens SBW25 | 0.85 | PFLU_RS24975 | | SAM-dependent methyltransferase | 0.69 | PFLU_RS28485 | | TetR/AcrR family transcriptional regulator | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.85 | PFLU_RS24975 | | SAM-dependent methyltransferase | 0.69 | PFLU_RS28485 | | TetR/AcrR family transcriptional regulator | low | > 109 |
| Pseudomonas fluorescens FW300-N2C3 | 0.85 | AO356_22655 | | SAM-dependent methyltransferase | 0.68 | AO356_13305 | | TetR family transcriptional regulator | low | > 104 |
| Shewanella oneidensis MR-1 | 0.47 | SO2325 | cheR-3 | chemotaxis protein methyltransferase CheR (NCBI ptt file) | 0.31 | SO4675 | | transcriptional regulator, TetR family (NCBI ptt file) | low | > 76 |
| Pseudomonas sp. S08-1 | 0.43 | OH686_21845 | | Chemotaxis protein methyltransferase CheR | 0.62 | OH686_14175 | | Transcriptional regulator, AcrR family | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.43 | Psest_0654 | | Methylase of chemotaxis methyl-accepting proteins | 0.55 | Psest_0248 | | Transcriptional regulator | low | > 67 |
| Ralstonia solanacearum PSI07 | 0.34 | RPSI07_RS06240 | | chemotaxis protein CheR | 0.27 | RPSI07_RS14210 | | TetR family transcriptional regulator | low | > 81 |
| Pseudomonas sp. SVBP6 | 0.34 | COO64_RS00645 | | protein-glutamate O-methyltransferase CheR | 0.70 | COO64_RS12870 | | TetR/AcrR family transcriptional regulator | low | > 93 |
| Shewanella sp. ANA-3 | 0.33 | Shewana3_2215 | | MCP methyltransferase, CheR-type (RefSeq) | 0.31 | Shewana3_4103 | | TetR family transcriptional regulator (RefSeq) | low | > 73 |
| Ralstonia solanacearum GMI1000 | 0.33 | RS_RS23905 | | chemotaxis protein CheR | 0.27 | RS_RS10465 | | TetR family transcriptional regulator | low | > 80 |
| Cupriavidus basilensis FW507-4G11 | 0.33 | RR42_RS35795 | | chemotaxis protein CheR | 0.27 | RR42_RS05390 | | TetR family transcriptional regulator | low | > 128 |
| Ralstonia solanacearum IBSBF1503 | 0.33 | RALBFv3_RS17405 | | chemotaxis protein CheR | 0.27 | RALBFv3_RS03095 | | TetR family transcriptional regulator | low | > 76 |
| Ralstonia sp. UNC404CL21Col | 0.33 | ABZR87_RS17980 | | CheR family methyltransferase | 0.28 | ABZR87_RS15000 | | TetR/AcrR family transcriptional regulator | low | > 80 |
| Pseudomonas aeruginosa PA14 | 0.33 | IKLFDK_24670 | | Chemotaxis protein methyltransferase 2 | 0.62 | IKLFDK_23595 | | TetR family transcriptional regulator | low | > 100 |
| Ralstonia solanacearum UW163 | 0.33 | UW163_RS21745 | | chemotaxis protein CheR | 0.27 | UW163_RS10630 | | TetR family transcriptional regulator | — | — |
| Shewanella loihica PV-4 | 0.31 | Shew_0110 | | MCP methyltransferase, CheR-type (RefSeq) | 0.29 | Shew_3708 | | TetR family transcriptional regulator (RefSeq) | low | > 60 |
| Burkholderia phytofirmans PsJN | 0.31 | BPHYT_RS18980 | | chemotaxis protein CheR | 0.27 | BPHYT_RS06505 | | TetR family transcriptional regulator | low | > 109 |
| Variovorax sp. SCN45 | 0.30 | GFF5765 | | Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) | 0.22 | GFF4992 | | Transcriptional regulator, AcrR family | low | > 127 |
| Lysobacter sp. OAE881 | 0.30 | ABIE51_RS16950 | | CheR family methyltransferase | 0.30 | ABIE51_RS12300 | | TetR/AcrR family transcriptional regulator | low | > 62 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.30 | GFF1477 | | Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) | 0.24 | GFF404 | | Transcriptional regulator, TetR family | low | > 90 |
| Shewanella amazonensis SB2B | 0.29 | Sama_3498 | | protein-glutamate O-methyltransferase (RefSeq) | 0.32 | Sama_0099 | | TetR family transcriptional regulator (RefSeq) | low | > 62 |
| Vibrio cholerae E7946 ATCC 55056 | 0.29 | CSW01_19530 | | Chemotaxis protein methyltransferase 3 | 0.30 | CSW01_01725 | | TetR family transcriptional regulator | low | > 62 |
| Acidovorax sp. GW101-3H11 | 0.29 | Ac3H11_1423 | | Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) | 0.24 | Ac3H11_1877 | | Transcriptional regulator, TetR family | low | > 79 |
| Paraburkholderia graminis OAS925 | 0.29 | ABIE53_000121 | | chemotaxis protein methyltransferase CheR | 0.27 | ABIE53_001566 | | AcrR family transcriptional regulator | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.28 | H281DRAFT_05745 | | MCP methyltransferase, CheR-type | 0.27 | H281DRAFT_04543 | | transcriptional regulator, TetR family | low | > 103 |
| Paraburkholderia sabiae LMG 24235 | 0.28 | QEN71_RS28995 | | CheR family methyltransferase | 0.28 | QEN71_RS24285 | | TetR/AcrR family transcriptional regulator | low | > 153 |
| Agrobacterium fabrum C58 | 0.28 | Atu0518 | | chemotaxis methyltransferase | 0.22 | Atu1568 | | transcriptional regulator, TetR family | low | > 89 |
Not shown: 50 genomes with orthologs for Psyr_0783 only; 12 genomes with orthologs for Psyr_4757 only