Conservation of cofitness between Psyr_0690 and Psyr_3325 in Pseudomonas syringae pv. syringae B728a

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_0690 3-hydroxyisobutyrate dehydrogenase 1.0 Psyr_3325 fumarylacetoacetate hydrolase 0.30 14
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_0690 3-hydroxyisobutyrate dehydrogenase 1.00 Psyr_3325 fumarylacetoacetate hydrolase low > 86
Pseudomonas putida KT2440 0.81 PP_4666 3-hydroxyisobutyrate dehydrogenase 0.68 PP_4620 Fumarylacetoacetase low > 96
Pseudomonas sp. BP01 0.80 JOY50_RS27600 mmsB 3-hydroxyisobutyrate dehydrogenase 0.68 JOY50_RS15550 fahA fumarylacetoacetase low > 84
Pseudomonas sp. SVBP6 0.79 COO64_RS02715 mmsB 3-hydroxyisobutyrate dehydrogenase 0.68 COO64_RS03640 fahA fumarylacetoacetase low > 93
Pseudomonas orientalis W4I3 0.78 QF045_RS25975 3-hydroxyisobutyrate dehydrogenase 0.67 QF045_RS08000 fumarylacetoacetase low > 93
Pseudomonas fluorescens SBW25 0.78 PFLU_RS25535 3-hydroxyisobutyrate dehydrogenase 0.69 PFLU_RS05090 fumarylacetoacetase low > 109
Pseudomonas fluorescens SBW25-INTG 0.78 PFLU_RS25535 3-hydroxyisobutyrate dehydrogenase 0.69 PFLU_RS05090 fumarylacetoacetase low > 109
Pseudomonas lactucae CFBP13502 0.78 GEMAOFIL_04894 3-hydroxyisobutyrate dehydrogenase 0.69 GEMAOFIL_01211 hypothetical protein low > 96
Pseudomonas fluorescens FW300-N2E3 0.76 AO353_05985 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) (from data) 0.70 AO353_15555 fumarylacetoacetase low > 101
Pseudomonas fluorescens FW300-N2C3 0.76 AO356_07865 3-hydroxyisobutyrate dehydrogenase 0.67 AO356_16830 fumarylacetoacetase low > 104
Pseudomonas fluorescens GW456-L13 0.76 PfGW456L13_5145 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) (from data) 0.70 PfGW456L13_4961 Fumarylacetoacetase (EC 3.7.1.2) low > 87
Pseudomonas fluorescens FW300-N1B4 0.76 Pf1N1B4_1228 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) 0.71 Pf1N1B4_1024 Fumarylacetoacetase (EC 3.7.1.2) low > 87
Pseudomonas sp. RS175 0.75 PFR28_00014 3-hydroxyisobutyrate dehydrogenase 0.72 PFR28_00222 hypothetical protein low > 88
Pseudomonas sp. DMC3 0.75 GFF4926 3-hydroxyisobutyrate dehydrogenase 0.70 GFF1877 hypothetical protein low > 89
Pseudomonas fluorescens FW300-N2E2 0.75 Pf6N2E2_3451 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) 0.67 Pf6N2E2_5291 Fumarylacetoacetase (EC 3.7.1.2) low > 103
Pseudomonas simiae WCS417 0.75 PS417_23720 3-hydroxyisobutyrate dehydrogenase 0.68 PS417_05020 fumarylacetoacetase — —
Cupriavidus basilensis FW507-4G11 0.64 RR42_RS28555 3-hydroxyisobutyrate dehydrogenase 0.43 RR42_RS09905 fumarylacetoacetase — —
Ralstonia sp. UNC404CL21Col 0.63 ABZR87_RS17475 3-hydroxyisobutyrate dehydrogenase 0.41 ABZR87_RS20855 fumarylacetoacetase low > 80
Paraburkholderia sabiae LMG 24235 0.62 QEN71_RS12390 3-hydroxyisobutyrate dehydrogenase 0.45 QEN71_RS35655 fumarylacetoacetase low > 153
Acinetobacter baumannii LAC-4 0.62 RR41_RS18340 3-hydroxyisobutyrate dehydrogenase 0.38 RR41_RS00345 fumarylacetoacetase low > 55
Ralstonia solanacearum PSI07 0.61 RPSI07_RS02325 3-hydroxyisobutyrate dehydrogenase 0.41 RPSI07_RS02615 fumarylacetoacetase low > 81
Paraburkholderia bryophila 376MFSha3.1 0.61 H281DRAFT_01201 3-hydroxyisobutyrate dehydrogenase 0.43 H281DRAFT_04742 fumarylacetoacetate hydrolase low > 103
Ralstonia solanacearum UW163 0.61 UW163_RS18760 3-hydroxyisobutyrate dehydrogenase 0.39 UW163_RS18930 fumarylacetoacetase — —
Ralstonia solanacearum IBSBF1503 0.61 RALBFv3_RS20415 3-hydroxyisobutyrate dehydrogenase 0.39 RALBFv3_RS20245 fumarylacetoacetase low > 76
Acinetobacter radioresistens SK82 0.60 MPMX26_01549 3-hydroxyisobutyrate dehydrogenase 0.40 MPMX26_02377 hypothetical protein — —
Paraburkholderia graminis OAS925 0.60 ABIE53_005735 3-hydroxyisobutyrate dehydrogenase 0.44 ABIE53_000904 fumarylacetoacetase low > 113
Burkholderia phytofirmans PsJN 0.60 BPHYT_RS28025 3-hydroxyisobutyrate dehydrogenase 0.48 BPHYT_RS11790 fumarylacetoacetase low > 109
Ralstonia solanacearum GMI1000 0.58 RS_RS20225 3-hydroxyisobutyrate dehydrogenase 0.41 RS_RS20430 fumarylacetoacetase low > 80
Pseudomonas aeruginosa PUPa3 0.49 DQ20_RS41995 mmsB;go_function=3-hydroxyisobutyrate 3-hydroxyisobutyrate dehydrogenase 0.69 DQ20_RS38545 fahA;go_function=fumarylacetoacetase fumarylacetoacetase low > 101
Pseudomonas aeruginosa MRSN321 0.49 DY961_RS15160 mmsB;go_function=3-hydroxyisobutyrate 3-hydroxyisobutyrate dehydrogenase 0.69 DY961_RS16225 fahA;go_function=fumarylacetoacetase fumarylacetoacetase low > 100
Pseudomonas aeruginosa PA14 0.48 IKLFDK_18220 3-hydroxyisobutyrate dehydrogenase 0.69 IKLFDK_09815 fumarylacetoacetase low > 98
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS15390 3-hydroxyisobutyrate dehydrogenase 0.53 HSERO_RS05610 fumarylacetoacetase — —
Variovorax sp. OAS795 0.44 ABID97_RS19405 3-hydroxyisobutyrate dehydrogenase 0.52 ABID97_RS03955 fumarylacetoacetase low > 91
Variovorax sp. SCN45 0.42 GFF7381 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) 0.53 GFF5056 Fumarylacetoacetase (EC 3.7.1.2) low > 127
Sphingobium sp. HT1-2 0.41 GFF2876 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) 0.57 GFF882 Fumarylacetoacetase (EC 3.7.1.2) low > 95
Rhodopseudomonas palustris CGA009 0.38 TX73_017835 3-hydroxyisobutyrate dehydrogenase 0.42 TX73_024275 fumarylacetoacetase low > 86
Sphingomonas koreensis DSMZ 15582 0.37 Ga0059261_3686 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) 0.40 Ga0059261_1693 fumarylacetoacetate hydrolase (EC 3.7.1.2) low > 68
Phaeobacter inhibens DSM 17395 0.37 PGA1_c17360 3-hydroxyisobutyrate dehydrogenase MmsB 0.40 PGA1_c00430 fumarylacetoacetase Fah low > 62
Dinoroseobacter shibae DFL-12 0.36 Dshi_1752 3-hydroxyisobutyrate dehydrogenase (RefSeq) 0.37 Dshi_3811 fumarylacetoacetase (RefSeq) low > 64
Hydrogenophaga sp. GW460-11-11-14-LB1 0.26 GFF139 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) 0.50 GFF2281 Fumarylacetoacetase (EC 3.7.1.2) — —

Not shown: 51 genomes with orthologs for Psyr_0690 only; 3 genomes with orthologs for Psyr_3325 only